Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1016/j.celrep.2020.107628

https://doi.org/10.1016/j.celrep.2020.107628

Single-Cell RNA Sequencing Reveals a Dynamic Stromal Niche That Supports Tumor Growth

Cited by: 156
Author(s): Sarah Davidson, Mirjana Efremova, Angela Riedel, Bidesh Mahata, Jhuma Pramanik, Jani Huuhtanen, Gozde Kar, Roser Vento‐Tormo, Tzachi Hagai, Xi Chen, Muzlifah Haniffa, Jacqueline D. Shields, Sarah A. Teichmann
Published: over 4 years ago

Software Mentions 6

bioconductor: monocle
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Papers that mentioned: 60
bioconductor: scran
Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: CellPhoneDB
Inferring cell-cell communication.
Papers that mentioned: 89
pypi: monocle
An async programming framework with a blocking look-alike syntax
Papers that mentioned: 60
pypi: package
package is a package to package your package
Papers that mentioned: 1,300