Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1016/j.celrep.2019.05.026
https://doi.org/10.1016/j.celrep.2019.05.026
Cited by: 41
Author(s): Shen Hsi Yang, Munazah Andrabi, Rebecca Biss, Syed Murtuza Baker, Mudassar Iqbal, Andrew D. Sharrocks
Published: almost 5 years ago
Software Mentions 11
bioconductor: AUCell
AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)Papers that mentioned: 45
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: scater
Single-Cell Analysis Toolkit for Gene Expression Data in RPapers that mentioned: 79
pypi: browser
A package to prevent Dependency Confusion attacks against Yandex.Papers that mentioned: 2,125
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assaysPapers that mentioned: 3,071
pypi: STAMP
A graphical software package for analyzing taxonomic and functional profiles.Papers that mentioned: 1,190