Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1007/s12032-017-0963-9

https://doi.org/10.1007/s12032-017-0963-9

The identification of key genes and pathways in hepatocellular carcinoma by bioinformatics analysis of high-throughput data

Cited by: 107
Author(s): Chaoyang Zhang, Li Peng, Yaqin Zhang, Zhaoyang Liu, Wenling Li, Shilian Chen, Guancheng Li
Published: over 7 years ago

Software Mentions 12

bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
bioconductor: affycoretools
Functions useful for those doing repetitive analyses with Affymetrix GeneChips
Papers that mentioned: 36
bioconductor: affyPLM
Methods for fitting probe-level models
Papers that mentioned: 162
bioconductor: gcrma
Background Adjustment Using Sequence Information
Papers that mentioned: 186
bioconductor: GeneAnswers
Papers that mentioned: 33
bioconductor: GOstats
Tools for manipulating GO and microarrays
Papers that mentioned: 368
bioconductor: graph
graph: A package to handle graph data structures
Papers that mentioned: 45
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: RColorBrewer
ColorBrewer Palettes
Papers that mentioned: 490
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: graph
Directed and undirected graph data structures and algorithms.
Papers that mentioned: 45
pypi: TOM
Tiny Object Model for XML
Papers that mentioned: 73