Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1002/pro.3299

https://doi.org/10.1002/pro.3299

Automating tasks in protein structure determination with the clipper python module

Cited by: 6
Author(s): Stuart McNicholas, Tristan I. Croll, Tom Burnley, Colin M. Palmer, Soon Wen Hoh, Huw T. Jenkins, E.J. Dodson, Kevin Cowtan, Jon Agirre
Published: almost 7 years ago

Software Mentions 10

bioconductor: clipper
Gene Set Analysis Exploiting Pathway Topology
Papers that mentioned: 8
cran: CCP
Significance Tests for Canonical Correlation Analysis (CCA)
Papers that mentioned: 49
cran: PHENIX
Phenotypic Integration Index
Papers that mentioned: 2,287
pypi: cctbx
The Computational Crystallography Toolbox
Papers that mentioned: 58
pypi: clipper
A set of scripts for calling peaks on CLIP-seq data
Papers that mentioned: 8
pypi: cmake
CMake is an open-source, cross-platform family of tools designed to build, test and package software
Papers that mentioned: 16
pypi: lxml
Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API.
Papers that mentioned: 9
pypi: mrcfile
MRC file I/O library
Papers that mentioned: 6
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
pypi: Pythonic
Graphical automation tool
Papers that mentioned: 6