Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi: base-package
python package template.
Papers that mentioned: 1
pypi: Basket
A local static PyPI repository builder
Papers that mentioned: 1
pypi: Batcher
Cut sliceable objects into batches, eg for paging display on a website
Papers that mentioned: 1
pypi: BayesDB
A Bayesian database table for querying the probable implications of data as easily as SQL databases query the data itself.
Papers that mentioned: 1
pypi: bbb
Buildbot <-> Taskcluster Bridge
Papers that mentioned: 1
pypi: bbcflib
Utility modules for deploying workflows in the BBCF
Papers that mentioned: 1
pypi: bbrc-validator
Systematic sanity checks on imaging datasets within an XNAT environment
Papers that mentioned: 1
pypi: bcca
Helpers from Base Camp Coding Academy
Papers that mentioned: 1
pypi: Bcfg2
Bcfg2 Server
Papers that mentioned: 1
pypi: beatbox
A Python library for querying/updating Saleforce.com data via SOAP API
Papers that mentioned: 1
pypi: beat
'Bayesian Earthquake Analysis Tool'
Papers that mentioned: 1
pypi: beatboxer
A beatboxer to create custom beats.
Papers that mentioned: 1
pypi: beautifulsoup4
Screen-scraping library
Papers that mentioned: 1
pypi: bedshift
BED file perturbations
Papers that mentioned: 1
pypi: Benchmarker
small but awesome utility for benchmarking
Papers that mentioned: 1
pypi: bertha
Python client library and console util for BerthaD
Papers that mentioned: 1
pypi: bester
A simple sorter of oddly formatted data!
Papers that mentioned: 1
pypi: bids
bids: a template for small scientific Python projects
Papers that mentioned: 1
pypi: BibReview
BibReview is a software for managing bibliographic database. It includes avanced functions for literature reviews.
Papers that mentioned: 1
pypi: BIDSHandler
Simple way to manage and manipulate BIDS compatible data
Papers that mentioned: 1
pypi: BIF
有用的内置函数。
Papers that mentioned: 1
pypi: bilbo
Commands to help build and maintain a gollum wiki
Papers that mentioned: 1
pypi: biotool
Utilities such as binary search on the lines of a file
Papers that mentioned: 1
pypi: binpacker
Distribute weighted tasks equally to workers by solving Bin Packing problem. This package provides an abstraction for user to extend
Papers that mentioned: 1
pypi: BioDendro
a package to cluster metabolomics data and plot dendrograms
Papers that mentioned: 1
pypi: biomass
A Python Framework for Modeling and Analysis of Signaling Systems
Papers that mentioned: 1
pypi: BioMetAll

Papers that mentioned: 1
pypi: bioseq
Bioseq is a lightweight Python package for handling nucleotide, protein, and codon sequences.
Papers that mentioned: 1
pypi: birdsuite
UNKNOWN
Papers that mentioned: 1
pypi: biskit
A Python platform for structural bioinformatics
Papers that mentioned: 1
pypi: bits
UNKNOWN
Papers that mentioned: 1
cran: nlnet
Nonlinear Network, Clustering, and Variable Selection Based on DCOL
Papers that mentioned: 1
cran: nlshrink
Non-Linear Shrinkage Estimation of Population Eigenvalues and Covariance Matrices
Papers that mentioned: 1
cran: nlsr
Functions for Nonlinear Least Squares Solutions - Updated 2022
Papers that mentioned: 1
cran: nlt
A Nondecimated Lifting Transform for Signal Denoising
Papers that mentioned: 1
cran: nlWaldTest
Wald Test of Nonlinear Restrictions and Nonlinear CI
Papers that mentioned: 1
cran: NMADiagT
Network Meta-Analysis of Multiple Diagnostic Tests
Papers that mentioned: 1
cran: nmathresh
Thresholds and Invariant Intervals for Network Meta-Analysis
Papers that mentioned: 1
cran: nnfor
Time Series Forecasting with Neural Networks
Papers that mentioned: 1
cran: nnt
The Number Needed to Treat (NNT) for Survival Endpoint
Papers that mentioned: 1
cran: noise
Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data
Papers that mentioned: 1
cran: NonCompart
Noncompartmental Analysis for Pharmacokinetic Data
Papers that mentioned: 1
cran: nonmem2R
Loading NONMEM Output Files with Functions for Visual Predictive Checks (VPC) and Goodness of Fit (GOF) Plots
Papers that mentioned: 1
cran: nopaco
Non-Parametric Concordance Coefficient
Papers that mentioned: 1
cran: norm2
Analysis of Incomplete Multivariate Data under a Normal Model
Papers that mentioned: 1
cran: NORMT3
Evaluates Complex Erf, Erfc, Faddeeva, and Density of Sum of Gaussian and Student's t
Papers that mentioned: 1
cran: noweb
The 'noweb' System for R
Papers that mentioned: 1
cran: npbr
Nonparametric Boundary Regression
Papers that mentioned: 1
cran: NPCD
Nonparametric Methods for Cognitive Diagnosis
Papers that mentioned: 1
cran: NPCirc
Nonparametric Circular Methods
Papers that mentioned: 1
cran: nplplot
Plotting Linkage and Association Results
Papers that mentioned: 1
cran: npreg
Nonparametric Regression via Smoothing Splines
Papers that mentioned: 1
cran: nprobust
Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation
Papers that mentioned: 1
cran: nproc
Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves
Papers that mentioned: 1
cran: nsp
Inference for Multiple Change-Points in Linear Models
Papers that mentioned: 1
cran: Numero
Statistical Framework to Define Subgroups in Complex Datasets
Papers that mentioned: 1
cran: numGen
Number Series Generator
Papers that mentioned: 1
cran: nutriNetwork
Structure Learning with Copula Graphical Model
Papers that mentioned: 1
cran: obs.agree
An R package to assess agreement between observers
Papers that mentioned: 1
cran: occupancy
Probability Functions for Occupancy Distributions
Papers that mentioned: 1
cran: oceanmap
A Plotting Toolbox for 2D Oceanographic Data
Papers that mentioned: 1
cran: oem
Orthogonalizing EM: Penalized Regression for Big Tall Data
Papers that mentioned: 1
cran: OmicKriging
Poly-Omic Prediction of Complex TRaits
Papers that mentioned: 1
cran: onls
Orthogonal Nonlinear Least-Squares Regression
Papers that mentioned: 1
cran: oops
S3 Style Object Oriented Programming
Papers that mentioned: 1
cran: opdisDownsampling
Optimal Distribution Preserving Down-Sampling of Bio-Medical Data
Papers that mentioned: 1
cran: OPDOE
Optimal Design of Experiments
Papers that mentioned: 1
pypi: blind
Blind Client: The easiest ML tracking library
Papers that mentioned: 1
pypi: blob
UNKNOWN
Papers that mentioned: 1
pypi: BloomFilter
A simple implement of bloom filter
Papers that mentioned: 1
pypi: blow
Small script to dos evil hackers.
Papers that mentioned: 1
pypi: Bluebook
Pylot is a Flask extension that adds structure and map your views and templates together for rapid application development
Papers that mentioned: 1
pypi: Bookmark
Web bookmark manager
Papers that mentioned: 1
pypi: booster
Boost your project
Papers that mentioned: 1
pypi: botox
Boto3 Extended
Papers that mentioned: 1
pypi: Boutique
The command line tool for boutiqueforge.com. It contains a web server embedded that can emulate the BoutiqueForge environment. This allows you to develop and test on your local machine before pushing any changes to online. More information at https://boutiqueforge.com/docs/article/getting_started
Papers that mentioned: 1
pypi: bower

Papers that mentioned: 1
cran: optAUC
Optimal Combinations of Diagnostic Tests Based on AUC
Papers that mentioned: 1
cran: optrees
Optimal Trees in Weighted Graphs
Papers that mentioned: 1
cran: ora
Convenient Tools for Working with Oracle Databases
Papers that mentioned: 1
cran: OrdNor
Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions
Papers that mentioned: 1
cran: osd
Orthogonal Signal Deconvolution for Spectra Deconvolution in GC-MS and GCxGC-MS Data
Papers that mentioned: 1
cran: osDesign
Design, Planning and Analysis of Observational Studies
Papers that mentioned: 1
cran: ParDNAcopy
Parallel implementation of the "segment" function of package "DNAcopy"
Papers that mentioned: 1
cran: osqp
Quadratic Programming Solver using the 'OSQP' Library
Papers that mentioned: 1
cran: OxyBS
Processing of Oxy-Bisulfite Microarray Data
Papers that mentioned: 1
cran: oz
Plot the Australian Coastline and States
Papers that mentioned: 1
cran: packagefinder
Comfortable Search for R Packages on CRAN, Either Directly from the R Console or with an R Studio Add-in
Papers that mentioned: 1
cran: PACVr
Plastome Assembly Coverage Visualization
Papers that mentioned: 1
cran: paleoMAS
Paleoecological Analysis
Papers that mentioned: 1
pypi: bpel

Papers that mentioned: 1
pypi: bpg
template engine with expression
Papers that mentioned: 1
pypi: bpmn

Papers that mentioned: 1
pypi: bp-utils
A set of scripts for Bitbucket Pipelines
Papers that mentioned: 1
pypi: br
batch rename
Papers that mentioned: 1
pypi: Braid
Meta-framework for faster prototyping in Deep Learning
Papers that mentioned: 1
pypi: brainglobe
Python-based tools for computational neuroanatomy.
Papers that mentioned: 1
pypi: brama
API Gateway proxy server with plugins
Papers that mentioned: 1
pypi: brancher
A user-centered Python package for differentiable probabilistic inference
Papers that mentioned: 1
cran: panelvar
Panel Vector Autoregression
Papers that mentioned: 1