Packages with Software Mentions in Scientific Papers

cran: IRISSeismic

Classes and Methods for Seismic Data Analysis
Papers that mentioned: 1

Very Likely Science (93)

pypi: asia

Papers that mentioned: 1

Unlikely Science (0)

pypi: ultrasound

ultrasound module for raspberry pi
Papers that mentioned: 1

Very Likely Science (65)

pypi: argutils

Functions to build matched argument parsers and config files
Papers that mentioned: 1

Very Likely Science (60)

pypi: fio

Feature I/O for TensorFlow
Papers that mentioned: 1

Very Likely Science (65)

pypi: arviz

Exploratory analysis of Bayesian models
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: matter

A framework for rapid prototyping with file-based data structures
Papers that mentioned: 1

Very Likely Science (100)

pypi: argv

Simpler command line argument parsing
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: DEScan2

Differential Enrichment Scan 2
Papers that mentioned: 1

Very Likely Science (100)

pypi: umol

umol: molecular data analytics suite
Papers that mentioned: 1

Likely Science (50)

pypi: asdf

Python implementation of the ASDF Standard
Papers that mentioned: 1

Very Likely Science (65)

cran: TreeTools

Create, Modify and Analyse Phylogenetic Trees
Papers that mentioned: 1

Very Likely Science (100)

pypi: mccortex

.
Papers that mentioned: 1

Very Likely Science (65)

cran: IMak

Item Maker
Papers that mentioned: 1

Very Likely Science (75)

cran: flower

Tools for characterizing flowering traits
Papers that mentioned: 1

Very Likely Science (75)

pypi: eps

Easy plugin system
Papers that mentioned: 1

Very Likely Science (65)

pypi: ArduinoInterface

Papers that mentioned: 1

Unlikely Science (0)

bioconductor: RpsiXML

Papers that mentioned: 1

Unlikely Science (0)

pypi: tciaclient

TCIA (The Cancer Imaging Archive) Download Client for Python
Papers that mentioned: 1

Very Likely Science (80)

cran: fOptions

Rmetrics - Pricing and Evaluating Basic Options
Papers that mentioned: 1

Very Likely Science (75)

pypi: amphora

AMQP RPC for services based on gevent
Papers that mentioned: 1

Very Likely Science (65)

cran: forensim

Statistical tools for the interpretation of forensic DNA mixtures
Papers that mentioned: 1

Very Likely Science (60)

cran: IrregLong

Analysis of Longitudinal Data with Irregular Observation Times
Papers that mentioned: 1

Very Likely Science (100)

pypi: illumiprocessor

Automated Illumina read trimming using trimmomatic
Papers that mentioned: 1

Very Likely Science (100)

pypi: aubio

a collection of tools for music analysis
Papers that mentioned: 1

Very Likely Science (65)

cran: irrICC

Intraclass Correlations for Quantifying Inter-Rater Reliability
Papers that mentioned: 1

Very Likely Science (85)

bioconductor: RGalaxy

Papers that mentioned: 1

Unlikely Science (0)

bioconductor: rfaRm

An R interface to the Rfam database
Papers that mentioned: 1

Very Likely Science (90)

cran: fpow

Computing the noncentrality parameter of the noncentral F distribution
Papers that mentioned: 1

Very Likely Science (75)

cran: fpp2

Data for "Forecasting: Principles and Practice" (2nd Edition)
Papers that mentioned: 1

Very Likely Science (83)

bioconductor: Rcade

Papers that mentioned: 1

Unlikely Science (0)

cran: FRCC

Fast Regularized Canonical Correlation Analysis
Papers that mentioned: 1

Very Likely Science (93)

bioconductor: megadepth

megadepth: BigWig and BAM related utilities
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: rama

Papers that mentioned: 1

Unlikely Science (0)

bioconductor: MEIGOR

MEIGO - MEtaheuristics for bIoinformatics Global Optimization
Papers that mentioned: 1

Very Likely Science (100)

pypi: VideoAnalysis

Widgets for analysis of worm videos
Papers that mentioned: 1

Very Likely Science (90)

cran: ftrCOOL

Feature Extraction from Biological Sequences
Papers that mentioned: 1

Very Likely Science (75)

bioconductor: memes

motif matching, comparison, and de novo discovery using the MEME Suite
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: MeSHDbi

DBI to construct MeSH-related package from sqlite file
Papers that mentioned: 1

Very Likely Science (75)

pypi: rampage

An arbitrary waveform builder and a control system for ultra-cold atom and ion trap experiments
Papers that mentioned: 1

Very Likely Science (90)

cran: funFEM

Clustering in the Discriminative Functional Subspace
Papers that mentioned: 1

Very Likely Science (75)

cran: immuneSIM

Tunable Simulation of B- And T-Cell Receptor Repertoires
Papers that mentioned: 1

Very Likely Science (85)

bioconductor: MesKit

A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic alterations
Papers that mentioned: 1

Very Likely Science (75)

pypi: wo

Workflow Orchestration tool
Papers that mentioned: 1

Very Likely Science (65)

pypi: arrowhead

micro-framework for flowchart-like computing
Papers that mentioned: 1

Very Likely Science (65)

pypi: python-social-auth

Python social authentication made simple.
Papers that mentioned: 1

Very Likely Science (100)

cran: fwsim

Fisher-Wright Population Simulation
Papers that mentioned: 1

Very Likely Science (85)

cran: g2f

Find and Fill Gaps in Metabolic Networks
Papers that mentioned: 1

Very Likely Science (93)

cran: GABi

Framework for Generalized Subspace Pattern Mining
Papers that mentioned: 1

Very Likely Science (75)

cran: mvp

Fast Symbolic Multivariate Polynomials
Papers that mentioned: 1

Very Likely Science (85)

cran: gamlr

Gamma Lasso Regression
Papers that mentioned: 1

Very Likely Science (100)

pypi: vireo

A library and framework for event-driven application development
Papers that mentioned: 1

Very Likely Science (65)

pypi: vispy

Interactive visualization in Python
Papers that mentioned: 1

Very Likely Science (90)

cran: gamlss.demo

Demos for GAMLSS
Papers that mentioned: 1

Very Likely Science (83)

cran: gamlss.mx

Fitting Mixture Distributions with GAMLSS
Papers that mentioned: 1

Very Likely Science (83)

cran: gamlss.tr

Generating and Fitting Truncated ‘gamlss.family’ Distributions
Papers that mentioned: 1

Very Likely Science (83)

bioconductor: predictionet

Papers that mentioned: 1

Unlikely Science (0)

pypi: articles

An extremely simple blog engine based on Markdown files
Papers that mentioned: 1

Likely Science (40)

cran: gamRR

Calculate the RR for the GAM
Papers that mentioned: 1

Very Likely Science (75)

pypi: autoconfig

Simple environment, logging, and sys.path setup from a config file
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: ppiStats

Papers that mentioned: 1

Unlikely Science (0)

cran: gammSlice

Generalized Additive Mixed Model Analysis via Slice Sampling
Papers that mentioned: 1

Very Likely Science (93)

cran: isni

Index of Local Sensitivity to Nonignorability
Papers that mentioned: 1

Very Likely Science (83)

pypi: vta

These package provides VirusTotal API module
Papers that mentioned: 1

Very Likely Science (65)

cran: GaSP

Train and Apply a Gaussian Stochastic Process Model
Papers that mentioned: 1

Very Likely Science (75)

bioconductor: PoTRA

Papers that mentioned: 1

Unlikely Science (0)

cran: isodistrreg

Isotonic Distributional Regression (IDR)
Papers that mentioned: 1

Very Likely Science (99)

bioconductor: perturbatr

Papers that mentioned: 1

Unlikely Science (0)

pypi: ampgo

Adaptive Memory Programming for Global Optimization
Papers that mentioned: 1

Very Likely Science (75)

pypi: rama

Papers that mentioned: 1

Very Likely Science (65)

cran: GEEaSPU

Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE)
Papers that mentioned: 1

Very Likely Science (75)

bioconductor: psichomics

Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation
Papers that mentioned: 1

Very Likely Science (100)

pypi: popline

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: weaver

Wrapper for Fabric
Papers that mentioned: 1

Very Likely Science (65)

cran: geneListPie

Profiling a gene list into GOslim or KEGG function pie
Papers that mentioned: 1

Very Likely Science (75)

cran: music

Learn and Experiment with Music Theory
Papers that mentioned: 1

Very Likely Science (60)

pypi: fishbase

some useful functions for python
Papers that mentioned: 1

Very Likely Science (65)

cran: isqg

In Silico Quantitative Genetics
Papers that mentioned: 1

Very Likely Science (85)

pypi: oim

A library for working with the Open Information Model
Papers that mentioned: 1

Very Likely Science (65)

pypi: rainfall

Micro web framework around asyncio (ex tulip)
Papers that mentioned: 1

Very Likely Science (65)

cran: genomicper

Circular Genomic Permutation using Genome Wide Association p-Values
Papers that mentioned: 1

Very Likely Science (83)

pypi: IsolationForest

An implementation of the Isolation Forest anomaly detection algorithm.
Papers that mentioned: 1

Very Likely Science (75)

cran: GenTag

Generate Color Tag Sequences
Papers that mentioned: 1

Very Likely Science (75)

cran: iva

Instrumental Variable Analysis in Case-Control Association Studies
Papers that mentioned: 1

Very Likely Science (93)

cran: imp4p

Imputation for Proteomics
Papers that mentioned: 1

Very Likely Science (85)

cran: geotoolsR

Tools to Improve the Use of Geostatistic
Papers that mentioned: 1

Very Likely Science (75)

cran: hues

Distinct Colour Palettes Based on 'iwanthue'
Papers that mentioned: 1

Likely Science (52)

pypi: ase

Atomic Simulation Environment
Papers that mentioned: 1

Very Likely Science (90)

cran: GFE

Gross Flows Estimation under Complex Surveys
Papers that mentioned: 1

Very Likely Science (83)

cran: bpbounds

Nonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions
Papers that mentioned: 1

Very Likely Science (100)

pypi: xpa

X-ray diffraction lib for analysis
Papers that mentioned: 1

Very Likely Science (75)

cran: mut

Pairwise Likelihood Ratios
Papers that mentioned: 1

Likely Science (50)

pypi: asg

A tool to automatically generate schematics from SPICE netlists
Papers that mentioned: 1

Very Likely Science (65)

pypi: numconv

Python library to convert strings to numbers and numbers to strings.
Papers that mentioned: 1

Very Likely Science (65)

cran: gwsem

Papers that mentioned: 1

Unlikely Science (0)

pypi: mcgen

Python utilities for downloading and processing Minecraft's generated data.
Papers that mentioned: 1

Very Likely Science (65)

pypi: synchro

Customisable file transfers using rsync
Papers that mentioned: 1

Very Likely Science (85)

pypi: EmoPy

A deep neural net toolkit for emotion analysis via Facial Expression Recognition (FER)
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: genphen

Papers that mentioned: 1

Unlikely Science (0)

cran: meteR

Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)
Papers that mentioned: 1

Very Likely Science (97)