pypi: edd-utils
Download Studies from an Experiment Data Depot Instance
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cran: MonoInc
Monotonic Increasing
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cran: metatest
Fit and Test Metaregression Models
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cran: madsim
A Flexible Microarray Data Simulation Model
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pypi: reverse
Reverse a file
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pypi: boutiques
Schema for describing bash command-line tools
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pypi: epicenter
Python Package for interacting with the Forio Epicenter Platform
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cran: MortCast
Estimation and Projection of Age-Specific Mortality Rates
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pypi: revamp
Data pre-processing
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cran: SAMUR
Stochastic Augmentation of Matched Data Using Restriction Methods
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cran: LUCIDus
LUCID with Multiple Omics Data
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pypi: botox
Boto3 Extended
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pypi: Bother
A script to produce heightmaps (primarily for OpenTTD) using real-world elevation data.
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pypi: metabolinks
A set of tools for high-resolution MS metabolomics data analysis
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pypi: mergedb
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pypi: swimlane
Python driver for the Swimlane API
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pypi: bosh
BigObject service command line tool
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pypi: Riffle
Filesystem browser for PySide.
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bioconductor: weaver
Tools and extensions for processing Sweave documents
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pypi: paramap
Easily map flat dictionaries to object representations
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cran: openSTARS
An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS'
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cran: lqr
Robust Linear Quantile Regression
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pypi: gaia
manage computation of a network of dependent processes
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pypi: metabolisHMM
Constructing phylogenies and performing functional annotations with HMM markers
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cran: patchDVI
Package to Patch '.dvi' or '.synctex' Files
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bioconductor: TreeSummarizedExperiment
TreeSummarizedExperiment: a S4 Class for Data with Tree Structures
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pypi: retrofit
AutoML, Forecasting, NLP, Image Classification, Feature Engineering, Model Evaluation, Model Interpretation, Fast Processing.
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pypi: edt
Multi-Label Anisotropic Euclidean Distance Transform 3D
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cran: longitudinalcascade
Longitudinal Cascade
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pypi: bootstrap-stat
Bootstrap method for standard errors, confidence intervals, and more!
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pypi: Retro
Lightweight Declarative Web Toolkit
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cran: mpmcorrelogram
Multivariate Partial Mantel Correlogram
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pypi: fully
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pypi: boolsim
Python interface to boolSim
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cran: mppa
Statistics for analysing multiple simultaneous point processes on the real line
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bioconductor: traseR
GWAS trait-associated SNP enrichment analyses in genomic intervals
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pypi: cdev
CLI for cdev sdk
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cran: lmeSplines
Add Smoothing Spline Modelling Capability to 'nlme'
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cran: shadowtext
Shadow Text Grob and Layer
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bioconductor: timescape
Patient Clonal Timescapes
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cran: mpt
Multinomial Processing Tree Models
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pypi: nidm
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bioconductor: TFutils
TFutils
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pypi: metacells
Single-cell RNA Sequencing Analysis
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pypi: candis
A data mining suite for DNA Microarrays.
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pypi: paragraph
A computation graph micro-framework providing seamless lazy and concurrent evaluation.
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pypi: meow
meow is an editor-agnostic markdown/reST live preview server.
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cran: MRCE
Multivariate Regression with Covariance Estimation
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pypi: imagen
Generic Python library for 0D, 1D, and 2D pattern distributions.
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pypi: boolean
Converts string to their equivalent boolean value
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cran: mrfDepth
Depth Measures in Multivariate, Regression and Functional Settings
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pypi: restore
restore
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pypi: resting
Pretty convenient REST API client
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pypi: ftz
ftz: flush denormal numbers in numpy arrays to zero
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pypi: ogr
One API for multiple git forges.
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bioconductor: spkTools
Methods for Spike-in Arrays
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pypi: bomb
Web frond-end publish tools
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bioconductor: SNAGEE
Signal-to-Noise applied to Gene Expression Experiments
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bioconductor: sincell
R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data
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pypi: GaitAnalysisToolKit
Various tools for gait analysis used at the Cleveland State University Human Motion and Control Lab.
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pypi: swat
SAS Scripting Wrapper for Analytics Transfer (SWAT)
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pypi: perceptron
Multilayer perceptron network implementation in Python
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cran: ms.sev
Package for Calculation of ARMSS, Local MSSS and Global MSSS
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pypi: fstream
Faster async streams for Python.
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pypi: bodybuilder
A python port of the NPM Bodybuilder Package
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bioconductor: SEPIRA
Systems EPigenomics Inference of Regulatory Activity
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pypi: RestAPI
An package to wrap website REST services into python.
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pypi: paragon
A tiny command line benchmarking utility
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pypi: fso
File System Overlay - filesystem layering for unit testing
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bioconductor: scTHI
Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data
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pypi: career
The very basic to start some elearning activity
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cran: rmonad
A Monadic Pipeline System
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bioconductor: scTensor
Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition
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bioconductor: scruff
Single Cell RNA-Seq UMI Filtering Facilitator (scruff)
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pypi: fslutils
Functions working with FSL outputs
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pypi: metadata
Metadata for Humans
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pypi: bnpy
Bayesian nonparametric machine learning for Python
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pypi: ment
python library to write daily log in markdown quickly and to synthesize daily logs based on category
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pypi: resourcer
A simple wrapper around 'requests'
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pypi: fsk
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cran: VaRES
Computes Value at Risk and Expected Shortfall for over 100 Parametric Distributions
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pypi: perc
This module calculates percentages (based on two numbers) and gives the option to include a decimal point declaration while defaulting to two
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pypi: MeneTools
Metabolic Network Topology Analysis Tools
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cran: rmapshaper
Client for 'mapshaper' for 'Geospatial' Operations
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bioconductor: sagenhaft
Collection of functions for reading and comparing SAGE libraries
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pypi: bmtools
System informations
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pypi: anki
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pypi: metafinder
MetaFinder - Metadata search through Search Engines
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pypi: bms
Block-Model Simulator for python
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pypi: ripple
Python client for rippled
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bioconductor: RTNsurvival
Survival analysis using transcriptional networks inferred by the RTN package
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pypi: gala
Galactic dynamics in Python
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pypi: Resound
Audio clip fingerprinting library
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bioconductor: rRDP
Interface to the RDP Classifier
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pypi: resident
Address processing
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bioconductor: Rhtslib
HTSlib high-throughput sequencing library as an R package
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bioconductor: rgsepd
Gene Set Enrichment / Projection Displays
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pypi: rmm
Utilities for Dask and CUDA interactions
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pypi: rivet
A Python-to-S3 interface with added convenience features.
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cran: rlog
A Simple, Opinionated Logging Utility
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