Packages with Software Mentions in Scientific Papers | Ecosyste.ms: Papers

pypi: pytc

Tokyo Cabinet Python bindings
Papers that mentioned: 1

Very Likely Science (65)

pypi: spikesorters

Python wrappers for popular spike sorters
Papers that mentioned: 1

Very Likely Science (100)

pypi: PythonCyc

A Python interface to Pathway Tools, 2019 update
Papers that mentioned: 1

Very Likely Science (100)

pypi: Cyrus

Papers that mentioned: 1

Very Likely Science (65)

pypi: spiketoolkit

Python toolkit for analysis, visualization, and comparison of spike sorting output
Papers that mentioned: 1

Very Likely Science (95)

cran: BiDAG

Bayesian Inference for Directed Acyclic Graphs
Papers that mentioned: 1

Very Likely Science (85)

pypi: python-graph

A library for working with graphs in Python
Papers that mentioned: 1

Very Likely Science (80)

pypi: pythongrid

High-level python wapper for the Sun Grid Engine (SGE) using DRMAA and ZMQ
Papers that mentioned: 1

Very Likely Science (65)

pypi: grammar

Python library for natural language processing
Papers that mentioned: 1

Very Likely Science (65)

pypi: python-rocksdb

Python bindings for RocksDB
Papers that mentioned: 1

Very Likely Science (65)

pypi: cy

Modelling CRISPR dropout data
Papers that mentioned: 1

Very Likely Science (100)

pypi: cx

Compute nearest neighbor distances along the coast with a view angle.
Papers that mentioned: 1

Very Likely Science (85)

pypi: pytleap

Interface to connect to a TP-Link EAP.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pytl

Command line tool that parses python file, enumerates classes and methods as a tree structure.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pytoda

pytoda: PaccMann PyTorch Dataset Classes.
Papers that mentioned: 1

Very Likely Science (80)

cran: graticule

Meridional and Parallel Lines for Maps
Papers that mentioned: 1

Very Likely Science (77)

pypi: pytsa

Simple, human-readable, fully tested, signature-preserving Python decorators to ensure your method abides to its contract.
Papers that mentioned: 1

Very Likely Science (65)

pypi: SpiNNakerGraphFrontEnd

Front end to the SpiNNaker tool chain which uses a basic graph
Papers that mentioned: 1

Very Likely Science (100)

pypi: PyTumblr

A Python Tumblr API v2 Client
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyTTE

Package to compute X-ray diffraction curves of bent crystals by numerically solving the 1D Takagi-Taupin equation.
Papers that mentioned: 1

Very Likely Science (85)

cran: gppm

Gaussian Process Panel Modeling
Papers that mentioned: 1

Very Likely Science (85)

pypi: PyWavefront

Python library for importing Wavefront .obj files
Papers that mentioned: 1

Very Likely Science (100)

pypi: pywindow

My short description for my project.
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyX

Python package for the generation of PostScript, PDF, and SVG files
Papers that mentioned: 1

Very Likely Science (80)

pypi: spl

Spigot/Bukkit Plugin Manager
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyxmolpp2

Utils for processing MD
Papers that mentioned: 1

Very Likely Science (65)

pypi: cwt

A Python implementation of CWT/COSE.
Papers that mentioned: 1

Very Likely Science (65)

pypi: cwlprov

cwlprov API for Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: splicer

the world is a database now you can query it with SQL
Papers that mentioned: 1

Very Likely Science (65)

pypi: cwl2argparse

Generating Python code from CWL tool descriptions with CWL inputs/outputs as argparse arguments
Papers that mentioned: 1

Very Likely Science (65)

cran: memoise

'Memoisation' of Functions
Papers that mentioned: 1

Very Likely Science (100)

pypi: q2-micom

QIIME 2 plugin for metabolic modeling of microbial communities.
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: easyreporting

Helps creating report for improving Reproducible Computational Research
Papers that mentioned: 1

Very Likely Science (89)

pypi: coyote

An attempt to make a Chaos Monkey like framework in Python
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: dks

The double Kolmogorov-Smirnov package for evaluating multiple testing procedures.
Papers that mentioned: 1

Very Likely Science (83)

pypi: msmbuilder

MSMBuilder: Statistical models for Biomolecular Dynamics
Papers that mentioned: 1

Very Likely Science (100)

pypi: SplitStrains

SplitStrains detects and separates mixed strains of Mycobacterium tuberculosis.
Papers that mentioned: 1

Very Likely Science (65)

pypi: qic

data(JSON/XML/YAML) command line query tools with interactive mode.
Papers that mentioned: 1

Very Likely Science (65)

cran: ggh4x

Hacks for 'ggplot2'
Papers that mentioned: 1

Very Likely Science (99)

pypi: vartrix

Easily manange and automate variables and parameters.
Papers that mentioned: 1

Very Likely Science (65)

cran: ggetho

Visualisation of High-Throughput Behavioural (i.e. Ethomics) Data
Papers that mentioned: 1

Very Likely Science (60)

pypi: cve_search

Useful towel-related stuff.
Papers that mentioned: 1

Very Likely Science (65)

cran: GeoDE

A geometrical Approach to Differential expression and gene-set enrichment
Papers that mentioned: 1

Very Likely Science (85)

pypi: qp

A web-application framework.
Papers that mentioned: 1

Very Likely Science (65)

pypi: vega

A Jupyter widget for Vega 5 and Vega-Lite 4
Papers that mentioned: 1

Very Likely Science (95)

pypi: sushi

Create package template for everything
Papers that mentioned: 1

Very Likely Science (65)

pypi: vbox

VirtualBox CLI bindings
Papers that mentioned: 1

Very Likely Science (85)

pypi: qreg

A quantile regression library to fit an arbitrary function
Papers that mentioned: 1

Very Likely Science (90)

pypi: qs

CLI program to quickly share directories using a http server
Papers that mentioned: 1

Very Likely Science (65)

pypi: vbind

sRNA profiler
Papers that mentioned: 1

Very Likely Science (80)

cran: genSurv

Generating Multi-State Survival Data
Papers that mentioned: 1

Very Likely Science (100)

pypi: qtlsearch

Uses OMA's HOGs to predict genes related to QTL.
Papers that mentioned: 1

Very Likely Science (85)

pypi: grad-cam

Many Class Activation Map methods implemented in Pytorch for classification, segmentation, object detection and more
Papers that mentioned: 1

Very Likely Science (100)

pypi: qu

Quickly generating unique url of a picture for markdown files.
Papers that mentioned: 1

Very Likely Science (65)

cran: memapp

The Moving Epidemic Method Web Application
Papers that mentioned: 1

Very Likely Science (72)

cran: gendata

Generate and Modify Synthetic Datasets
Papers that mentioned: 1

Very Likely Science (75)

cran: gems

Generalized Multistate Simulation Model
Papers that mentioned: 1

Very Likely Science (85)

pypi: quartet

A Python library for playing with strings
Papers that mentioned: 1

Very Likely Science (65)

cran: gapfill

Fill Missing Values in Satellite Data
Papers that mentioned: 1

Very Likely Science (81)

cran: gamboostMSM

Boosting Multistate Models
Papers that mentioned: 1

Very Likely Science (75)

pypi: cubature

Numerical integration technique
Papers that mentioned: 1

Very Likely Science (100)

cran: fso

Fuzzy Set Ordination
Papers that mentioned: 1

Very Likely Science (83)

cran: forams

Foraminifera and Community Ecology Analyses
Papers that mentioned: 1

Very Likely Science (85)

pypi: questions

Questions is a form library that uses the power of SurveyJS for the UI.
Papers that mentioned: 1

Very Likely Science (65)

pypi: msk

Mycroft Skills Kit
Papers that mentioned: 1

Very Likely Science (80)

pypi: ctorrent

Curses Torrent Browser
Papers that mentioned: 1

Very Likely Science (65)

pypi: spread

CSV Spreadsheet library
Papers that mentioned: 1

Very Likely Science (65)

pypi: zeta

SCM and Project Collaboration Suite
Papers that mentioned: 1

Very Likely Science (65)

pypi: vcam

Papers that mentioned: 1

Very Likely Science (65)

cran: fdrci

Permutation-Based FDR Point and Confidence Interval Estimation
Papers that mentioned: 1

Very Likely Science (83)

pypi: vidstab

Video Stabilization using OpenCV
Papers that mentioned: 1

Very Likely Science (65)

pypi: spreg

PySAL Spatial Econometric Regression in Python
Papers that mentioned: 1

Very Likely Science (100)

cran: BClustLonG

A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data
Papers that mentioned: 1

Very Likely Science (85)

pypi: spseg

A segmentation and postagging tool package
Papers that mentioned: 1

Very Likely Science (65)

pypi: r2d2

some handy functions
Papers that mentioned: 1

Very Likely Science (65)

pypi: SPTE

Simple Python Template Engine
Papers that mentioned: 1

Very Likely Science (65)

pypi: vce

Virtual Constellation Engine.
Papers that mentioned: 1

Very Likely Science (65)

pypi: vCenter

Connecting to a vCenter
Papers that mentioned: 1

Very Likely Science (65)

pypi: ElecSus

(Atomic Physics) Calculate the weak-probe electric susceptibility for alkali-metal vapours
Papers that mentioned: 1

Very Likely Science (100)

pypi: Rach

Python client for Rach
Papers that mentioned: 1

Likely Science (40)

pypi: RADD

RADD (Race Against Drift-Diffusion model) is a python package for fitting & simulating cognitive models of reinforcement learning and decision-making
Papers that mentioned: 1

Very Likely Science (100)

pypi: radiant

Brython Framework
Papers that mentioned: 1

Very Likely Science (65)

pypi: starfish

Pipelines and pipeline components for the analysis of image-based transcriptomics data
Papers that mentioned: 1

Very Likely Science (100)

pypi: stargaze

Parse and query stardict dictionary files.
Papers that mentioned: 1

Very Likely Science (65)

pypi: ele

A lightweight package with the periodic table of the elements
Papers that mentioned: 1

Very Likely Science (85)

pypi: starmie

A* algorithm implementation
Papers that mentioned: 1

Very Likely Science (75)

pypi: strategy

Papers that mentioned: 1

Very Likely Science (65)

pypi: strava

Parse https://www.strava.com website using asyncio
Papers that mentioned: 1

Unlikely Science (15)

pypi: GPViz

A Python package for Gaussian process visualisation.
Papers that mentioned: 1

Very Likely Science (90)

pypi: stt

A library for doing speech recognition using a Coqui STT model
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: cola

A Framework for Consensus Partitioning
Papers that mentioned: 1

Very Likely Science (92)

pypi: css

a small, fast css parser for python the utilizes the codetalker library
Papers that mentioned: 1

Very Likely Science (65)

pypi: zxcvbn

Python implementation of Dropbox's realistic password strength estimator
Papers that mentioned: 1

Very Likely Science (65)

pypi: vienna

a short python wrapper for vienna tools
Papers that mentioned: 1

Very Likely Science (100)

pypi: sumo

Heavy weight plotting tools for ab initio solid-state calculations
Papers that mentioned: 1

Very Likely Science (100)

pypi: cshell

A command line tool to transfer transfer a webshell into a reverse shell, execute command directly into the webshell, genrating payload
Papers that mentioned: 1

Very Likely Science (85)

pypi: vcf2fhir

Convert .vcf files to HL7 FHIR standard
Papers that mentioned: 1

Unlikely Science (15)

cran: ezknitr

Avoid the Typical Working Directory Pain When Using 'knitr'
Papers that mentioned: 1

Very Likely Science (99)

cran: eyeTrackR

Organising and Analysing Eye-Tracking Data
Papers that mentioned: 1

Likely Science (58)

cran: BCBCSF

Bias-Corrected Bayesian Classification with Selected Features
Papers that mentioned: 1

Very Likely Science (85)