Packages with Software Mentions in Scientific Papers

pypi: gnb

A tool to build gene co-expression network using Methylation Microarrays
Papers that mentioned: 1

Very Likely Science (90)

pypi: derivative

Numerical differentiation in python.
Papers that mentioned: 1

Very Likely Science (85)

pypi: coremltools

Community Tools for Core ML
Papers that mentioned: 1

Very Likely Science (80)

pypi: gst

Git status tool
Papers that mentioned: 1

Very Likely Science (65)

pypi: component

A python library that makes is easy to consume bower components with python.
Papers that mentioned: 1

Very Likely Science (65)

cran: ggspectra

Extensions to 'ggplot2' for Radiation Spectra
Papers that mentioned: 1

Very Likely Science (100)

cran: ggseg3d

Tri-Surface Mesh Plots for Brain Atlases
Papers that mentioned: 1

Very Likely Science (93)

cran: tsBSS

Blind Source Separation and Supervised Dimension Reduction for Time Series
Papers that mentioned: 1

Very Likely Science (75)

pypi: coms

fly.
Papers that mentioned: 1

Very Likely Science (65)

pypi: des

A pure Python implementation for the famous DES algorithm
Papers that mentioned: 1

Very Likely Science (95)

bioconductor: flowcatchR

Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells
Papers that mentioned: 1

Very Likely Science (82)

bioconductor: FilterFFPE

FFPE Artificial Chimeric Read Filter for NGS data
Papers that mentioned: 1

Very Likely Science (90)

pypi: concordance

Dilbilimcilerin ihtiyaçları doğrultusunda geliştirilen concordance aracı
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: fishpond

Fishpond: downstream methods and tools for expression data
Papers that mentioned: 1

Very Likely Science (100)

cran: ggResidpanel

Panels and Interactive Versions of Diagnostic Plots using 'ggplot2'
Papers that mentioned: 1

Very Likely Science (100)

pypi: scikit-surgeryspeech

Interface to speech services for image-guided surgery.
Papers that mentioned: 1

Very Likely Science (100)

cran: RcppMeCab

'rcpp' Wrapper for 'mecab' Library
Papers that mentioned: 1

Very Likely Science (95)

bioconductor: widgetTools

Creates an interactive tcltk widget
Papers that mentioned: 1

Very Likely Science (83)

bioconductor: fcScan

fcScan for detecting clusters of coordinates with user defined options
Papers that mentioned: 1

Very Likely Science (83)

bioconductor: fCCAC

functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: FastqCleaner

A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files
Papers that mentioned: 1

Very Likely Science (75)

cran: poisson

Simulating Homogenous & Non-Homogenous Poisson Processes
Papers that mentioned: 1

Very Likely Science (83)

pypi: confgen

ConfGen is a little command utility that will help you to generate some configurations thanks to jinja2 templating
Papers that mentioned: 1

Likely Science (40)

bioconductor: VariantFiltering

Filtering of coding and non-coding genetic variants
Papers that mentioned: 1

Very Likely Science (100)

cran: poker

Play Texas Hold Em Poker
Papers that mentioned: 1

Very Likely Science (75)

pypi: gmr

Gaussian Mixture Regression
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: eisaR

Exon-Intron Split Analysis (EISA) in R
Papers that mentioned: 1

Very Likely Science (100)

pypi: describe

An experimental behavioral framework inspired from rspec.
Papers that mentioned: 1

Very Likely Science (75)

cran: ggpointdensity

A Cross Between a 2D Density Plot and a Scatter Plot
Papers that mentioned: 1

Very Likely Science (97)

pypi: mural

Market game
Papers that mentioned: 1

Likely Science (40)

pypi: Conpot

Conpot is an ICS honeypot with the goal to collect intelligence about the motives and methods of adversaries targeting industrial control systems
Papers that mentioned: 1

Very Likely Science (65)

cran: pollimetry

Estimate Pollinator Body Size and Co-Varying Ecological Traits
Papers that mentioned: 1

Very Likely Science (85)

cran: fanc

Penalized Likelihood Factor Analysis via Nonconvex Penalty
Papers that mentioned: 1

Very Likely Science (85)

cran: Polychrome

Qualitative Palettes with Many Colors
Papers that mentioned: 1

Likely Science (50)

pypi: gsync

GSync - RSync for Google Drive
Papers that mentioned: 1

Very Likely Science (65)

cran: corpora

Statistics and Data Sets for Corpus Frequency Data
Papers that mentioned: 1

Very Likely Science (85)

pypi: constraint

constraints satisfaction solver in Python
Papers that mentioned: 1

Very Likely Science (65)

cran: stpp

Space-Time Point Pattern Simulation, Visualisation and Analysis
Papers that mentioned: 1

Very Likely Science (85)

pypi: context

A profiler that tells it how it is
Papers that mentioned: 1

Very Likely Science (65)

pypi: scikit-surgerynditracker

Interface for Northern Digital (NDI) Trackers with data to NumPy arrays
Papers that mentioned: 1

Very Likely Science (100)

cran: propOverlap

Feature (gene) selection based on the Proportional Overlapping Scores
Papers that mentioned: 1

Very Likely Science (83)

pypi: lobster

Split audio files into tracks with a single command
Papers that mentioned: 1

Likely Science (40)

pypi: contour3d

Contour 3D algorithm for grid data.
Papers that mentioned: 1

Very Likely Science (75)

cran: LPWC

Lag Penalized Weighted Correlation for Time Series Clustering
Papers that mentioned: 1

Very Likely Science (100)

pypi: DigiPathAI

Deep Learning toolbox for WSI (digital histopatology) analysis
Papers that mentioned: 1

Very Likely Science (81)

pypi: descriptors

A collection of descriptors for validating input data.
Papers that mentioned: 1

Very Likely Science (65)

pypi: coolpuppy

A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: dpeak

dPeak (Deconvolution of Peaks in ChIP-seq Analysis)
Papers that mentioned: 1

Very Likely Science (100)

pypi: maxflow

Papers that mentioned: 1

Very Likely Science (65)

pypi: mpt

Microstructure Protocol Toolbox
Papers that mentioned: 1

Very Likely Science (80)

bioconductor: TTMap

Two-Tier Mapper: a clustering tool based on topological data analysis
Papers that mentioned: 1

Very Likely Science (100)

pypi: Passbook

Passbook file generator
Papers that mentioned: 1

Very Likely Science (65)

pypi: cool

Make Python code cooler. Less is more.
Papers that mentioned: 1

Very Likely Science (65)

pypi: mps

Search, Stream and Download MP3
Papers that mentioned: 1

Likely Science (40)

cran: PoolTestR

Prevalence and Regression for Pool-Tested (Group-Tested) Data
Papers that mentioned: 1

Very Likely Science (100)

pypi: gmqtt

Client for MQTT protocol
Papers that mentioned: 1

Very Likely Science (65)

pypi: LiteSQL

Библиотека для легкого использования БД!
Papers that mentioned: 1

Very Likely Science (65)

pypi: mpq

Python bindings for StormLib
Papers that mentioned: 1

Very Likely Science (65)

pypi: scikit-surgeryimage

scikit-surgeryimage implements image processing tools and alogrithms for Image Guided Surgery.
Papers that mentioned: 1

Very Likely Science (100)

pypi: multipletau

A multiple-tau algorithm for Python/NumPy
Papers that mentioned: 1

Very Likely Science (90)

cran: treelet

An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and Unordered Data
Papers that mentioned: 1

Very Likely Science (75)

cran: ggiraph

Make 'ggplot2' Graphics Interactive
Papers that mentioned: 1

Very Likely Science (100)

pypi: tak

Tak is a two person board game dreamed up by Pat Rothfuss in "The Wise Man's Fear".
Papers that mentioned: 1

Likely Science (40)

cran: powerGWASinteraction

Power Calculations for GxE and GxG Interactions for GWAS
Papers that mentioned: 1

Very Likely Science (75)

pypi: cos2

Chinac COS (Object Storage Service) SDK
Papers that mentioned: 1

Very Likely Science (65)

pypi: cost

Papers that mentioned: 1

Unlikely Science (0)

cran: longitudinal

Analysis of Multiple Time Course Data
Papers that mentioned: 1

Very Likely Science (90)

bioconductor: chopsticks

The 'snp.matrix' and 'X.snp.matrix' Classes
Papers that mentioned: 1

Very Likely Science (90)

pypi: cox-nnet

Extension of neural networks for Cox Regression
Papers that mentioned: 1

Very Likely Science (90)

pypi: mpop

Meteorological post processing package
Papers that mentioned: 1

Very Likely Science (100)

cran: pps

PPS Sampling
Papers that mentioned: 1

Very Likely Science (75)

pypi: sxp

SXP for Python
Papers that mentioned: 1

Very Likely Science (80)

pypi: COWBAT

CFIA OLC Workflow for Bacterial Assembly and Typing
Papers that mentioned: 1

Very Likely Science (80)

cran: gggibbous

Moon Charts, a Pie Chart Alternative
Papers that mentioned: 1

Very Likely Science (93)

cran: TPES

Tumor Purity Estimation using SNVs
Papers that mentioned: 1

Very Likely Science (75)

cran: gggap

Streamlined Creation of Segments on the Y-Axis of 'ggplot2' Plots
Papers that mentioned: 1

Very Likely Science (75)

pypi: mplleaflet

Convert Matplotlib plots into Leaflet web maps
Papers that mentioned: 1

Very Likely Science (65)

pypi: contributions

Generate the most coolest github/gitlab timelines contributions
Papers that mentioned: 1

Very Likely Science (65)

pypi: scikit-surgerycore

scikit-surgerycore contains commonly used Image Guided Surgery algorithms and tools
Papers that mentioned: 1

Very Likely Science (100)

cran: qtlhot

Inference for QTL Hotspots
Papers that mentioned: 1

Very Likely Science (83)

cran: localgauss

Estimating Local Gaussian Parameters
Papers that mentioned: 1

Very Likely Science (75)

cran: lobstr

Visualize R Data Structures with Trees
Papers that mentioned: 1

Very Likely Science (85)

pypi: desolver

Differential Equation System Solver
Papers that mentioned: 1

Very Likely Science (100)

cran: PreProcess

Basic Functions for Pre-Processing Microarrays
Papers that mentioned: 1

Very Likely Science (85)

cran: presens

Interface for PreSens Fiber Optic Data
Papers that mentioned: 1

Very Likely Science (75)

pypi: matgen

Fast matrix generation in python, including python style and matlab style support
Papers that mentioned: 1

Very Likely Science (65)

cran: strm

Spatio-Temporal Regression Modeling
Papers that mentioned: 1

Very Likely Science (85)

cran: gfcanalysis

Tools for Working with Hansen et al. Global Forest Change Dataset
Papers that mentioned: 1

Very Likely Science (85)

pypi: detecting

detecting
Papers that mentioned: 1

Very Likely Science (71)

cran: gets

General-to-Specific (GETS) Modelling and Indicator Saturation Methods
Papers that mentioned: 1

Very Likely Science (85)

cran: geospt

Geostatistical Analysis and Design of Optimal Spatial Sampling Networks
Papers that mentioned: 1

Very Likely Science (93)

cran: lmom

L-Moments
Papers that mentioned: 1

Very Likely Science (75)

cran: geojsonR

A GeoJson Processing Toolkit
Papers that mentioned: 1

Very Likely Science (77)

pypi: cripto

Ferramentas para utilização em criptografia KRSA
Papers that mentioned: 1

Very Likely Science (65)

pypi: devbox

Developer environment candy
Papers that mentioned: 1

Very Likely Science (65)

cran: collapsibleTree

Interactive Collapsible Tree Diagrams using 'D3.js'
Papers that mentioned: 1

Very Likely Science (100)

The (Adaptive) Elastic Net and Lasso Penalized Sparse Asymmetric Least Squares (SALES) and Coupled Sparse Asymmetric Least Squares (COSALES) using Coordinate Descent and Proximal Gradient Algorithms
Papers that mentioned: 1

Very Likely Science (93)

cran: prioritylasso

Analyzing Multiple Omics Data with an Offset Approach
Papers that mentioned: 1

Very Likely Science (83)

pypi: contrastive

Python library for performing unsupervised learning (e.g. PCA) in contrastive settings, where one is interested in finding directions and patterns that exist one dataset, but not the other
Papers that mentioned: 1

Very Likely Science (100)

cran: geodata

Download Geographic Data
Papers that mentioned: 1

Very Likely Science (81)