bioconductor: TBSignatureProfiler
Profile RNA-Seq Data Using TB Pathway Signatures
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pypi: ingest
tool for data processing pipelines
Papers that mentioned: 2
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pypi: cond
Custom numeric data type for Python 3 with some additional properties
Papers that mentioned: 2
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cran: gambin
Fit the Gambin Model to Species Abundance Distributions
Papers that mentioned: 2
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pypi: CoAPthon
CoAPthon is an implementation of the CoAP protocol.
Papers that mentioned: 2
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cran: devEMF
EMF Graphics Output Device
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cran: sns
Stochastic Newton Sampler (SNS)
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cran: coenocliner
Coenocline Simulation
Papers that mentioned: 2
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pypi: coral
Coral: code-ify your synthetic DNA design workflow.
Papers that mentioned: 2
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bioconductor: clustifyr
Classifier for Single-cell RNA-seq Using Cell Clusters
Papers that mentioned: 2
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cran: gb
Generalize Lambda Distribution and Generalized Bootstrapping
Papers that mentioned: 2
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pypi: Contextual
Replace globals with context-safe variables and services
Papers that mentioned: 2
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cran: gamlss.dist
Distributions for Generalized Additive Models for Location Scale and Shape
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pypi: conf
Facilitates a convenient use of configuration files
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cran: adjclust
Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
Papers that mentioned: 2
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bioconductor: rnaseqcomp
Benchmarks for RNA-seq Quantification Pipelines
Papers that mentioned: 2
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bioconductor: rWikiPathways
rWikiPathways - R client library for the WikiPathways API
Papers that mentioned: 2
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pypi: scadnano
Python scripting library for generating designs readable by scadnano.
Papers that mentioned: 2
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pypi: marquee
A simple Python logging formatter and handler for CloudWatch Events
Papers that mentioned: 2
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cran: gasfluxes
Greenhouse Gas Flux Calculation from Chamber Measurements
Papers that mentioned: 2
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cran: TestDataImputation
Missing Item Responses Imputation for Test and Assessment Data
Papers that mentioned: 2
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bioconductor: PepsNMR
Pre-process 1H-NMR FID signals
Papers that mentioned: 2
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cran: SLEMI
Statistical Learning Based Estimation of Mutual Information
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cran: cmmr
CEU Mass Mediator RESTful API
Papers that mentioned: 2
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pypi: codex
A comic archive web server.
Papers that mentioned: 2
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pypi: mlo
Object-oriented learners for machine learning
Papers that mentioned: 2
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cran: polyqtlR
QTL Analysis in Autopolyploid Bi-Parental F1 Populations
Papers that mentioned: 2
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cran: colormap
Color Palettes using Colormaps Node Module
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pypi: pair
a ladder pairing/matching library
Papers that mentioned: 2
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bioconductor: tigre
Transcription factor Inference through Gaussian process Reconstruction of Expression
Papers that mentioned: 2
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pypi: compadre
Compatible Particle Discretization and Remap
Papers that mentioned: 2
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bioconductor: SeqSQC
A bioconductor package for sample quality check with next generation sequencing data
Papers that mentioned: 2
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bioconductor: contiBAIT
Improves Early Build Genome Assemblies using Strand-Seq Data
Papers that mentioned: 2
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cran: dbarts
Discrete Bayesian Additive Regression Trees Sampler
Papers that mentioned: 2
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bioconductor: CGHbase
CGHbase: Base functions and classes for arrayCGH data analysis.
Papers that mentioned: 2
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cran: countToFPKM
Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
Papers that mentioned: 2
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pypi: subset
A cli-based word game
Papers that mentioned: 2
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pypi: compositional
Compositional data analysis in Python
Papers that mentioned: 2
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pypi: ScanWatch
Local tracker for address on Ethereum, BSC and Polygon chains
Papers that mentioned: 2
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pypi: mixture
Mixin classes for great objects !
Papers that mentioned: 2
Very Likely Science (60)
pypi: scheduler
A simple in-process python scheduler library with asyncio, threading and timezone support. Use datetime standard library objects for planning of Jobs depending on time cycles, fixed times, weekdays, dates, weights, offsets and execution counts.
Papers that mentioned: 2
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pypi: scedar
Single-cell exploratory data analysis for RNA-Seq
Papers that mentioned: 2
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cran: brlrmr
Bias Reduction with Missing Binary Response
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cran: colourvision
Colour Vision Models
Papers that mentioned: 2
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pypi: mpg
MPG: Markov Process Generator of DNA sequences
Papers that mentioned: 2
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bioconductor: chimeraviz
Visualization tools for gene fusions
Papers that mentioned: 2
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cran: corx
Create and Format Correlation Matrices
Papers that mentioned: 2
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bioconductor: ANCOMBC
Microbiome differential abudance and correlation analyses with bias correction
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cran: geodetector
Stratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation
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bioconductor: topconfects
Top Confident Effect Sizes
Papers that mentioned: 2
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cran: later
Utilities for Scheduling Functions to Execute Later with Event Loops
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bioconductor: BiocFileCache
Manage Files Across Sessions
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cran: geogrid
Turn Geospatial Polygons into Regular or Hexagonal Grids
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bioconductor: BiocOncoTK
Bioconductor components for general cancer genomics
Papers that mentioned: 2
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pypi: pqr
Lightweight library for backtesting factor strategies
Papers that mentioned: 2
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pypi: igor
igor: interface for reading binary IGOR files.
Papers that mentioned: 2
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pypi: GMDN
A python implementation of XKCD''s Geothmetic Meandian ( https://xkcd.com/2435/ )
Papers that mentioned: 2
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pypi: collate
Aggregated feature generation made easy.
Papers that mentioned: 2
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cran: geonames
Interface to the "Geonames" Spatial Query Web Service
Papers that mentioned: 2
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cran: geoscale
Geological Time Scale Plotting
Papers that mentioned: 2
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cran: bootStepAIC
Bootstrap stepAIC
Papers that mentioned: 2
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cran: AutoScore
An Interpretable Machine Learning-Based Automatic Clinical Score Generator
Papers that mentioned: 2
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bioconductor: AllelicImbalance
Investigates Allele Specific Expression
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cran: germinationmetrics
Seed Germination Indices and Curve Fitting
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cran: gesca
Generalized Structured Component Analysis (GSCA)
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cran: degreenet
Models for Skewed Count Distributions Relevant to Networks
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cran: clr
Curve Linear Regression via Dimension Reduction
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pypi: scikit-surgeryarucotracker
scikit-surgeryarucotracker is a simple tracking interface using ARuCo markers
Papers that mentioned: 2
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cran: GFM
Generalized Factor Model
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cran: DataVisualizations
Visualizations of High-Dimensional Data
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cran: coop
Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations
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cran: biwt
Compute the Biweight Mean Vector and Covariance & Correlation Matrice
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pypi: mkdir
mkdir
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cran: bcROCsurface
Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests
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cran: easyanova
Analysis of Variance and Other Important Complementary Analyses
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cran: tiger
TIme series of Grouped ERrors
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bioconductor: chipenrich
Gene Set Enrichment For ChIP-seq Peak Data
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pypi: glmtree
Generalized linear model tree
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cran: logbin
Relative Risk Regression Using the Log-Binomial Model
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pypi: mpld3
D3 Viewer for Matplotlib
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pypi: MLML
offers support for a variety of algorithms on memory-limited infrastructure
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pypi: Swoop
Swoop is a Python library for working with CadSoft Eagle files.
Papers that mentioned: 2
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cran: RWebLogo
plotting custom sequence logos
Papers that mentioned: 2
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cran: rTensor
Tools for Tensor Analysis and Decomposition
Papers that mentioned: 2
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bioconductor: recount3
Explore and download data from the recount3 project
Papers that mentioned: 2
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cran: s20x
Functions for University of Auckland Course STATS 201/208 Data Analysis
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pypi: human
Human intelligence module: solves AI-complete problems using MobileWorks.
Papers that mentioned: 2
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cran: ascii
Export R Objects to Several Markup Languages
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bioconductor: debrowser
Interactive Differential Expresion Analysis Browser
Papers that mentioned: 2
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bioconductor: transcriptogramer
Transcriptional analysis based on transcriptograms
Papers that mentioned: 2
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cran: DEMOVA
DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set
Papers that mentioned: 2
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cran: ggformula
Formula Interface to the Grammar of Graphics
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bioconductor: Travel
An utility to create an ALTREP object with a virtual pointer
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cran: doMPI
Foreach Parallel Adaptor for the Rmpi Package
Papers that mentioned: 2
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cran: landsat
Radiometric and Topographic Correction of Satellite Imagery
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cran: pool
Object Pooling
Papers that mentioned: 2
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cran: fastmatch
Fast 'match()' Function
Papers that mentioned: 2
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bioconductor: chromswitch
An R package to detect chromatin state switches from epigenomic data
Papers that mentioned: 2
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cran: acepack
ACE and AVAS for Selecting Multiple Regression Transformations
Papers that mentioned: 2
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bioconductor: cicero
Predict cis-co-accessibility from single-cell chromatin accessibility data
Papers that mentioned: 2
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