Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

cran: mixRasch
Mixture Rasch Models with JMLE
Papers that mentioned: 1
cran: mixsep
Forensic Genetics DNA Mixture Separation
Papers that mentioned: 1
pypi: ample

Papers that mentioned: 1
pypi: amplify
Amplify SDK for Quantum Annealing and Ising Machines
Papers that mentioned: 1
bioconductor: QuartPAC
Identification of mutational clusters in protein quaternary structures.
Papers that mentioned: 1
bioconductor: pvac
PCA-based gene filtering for Affymetrix arrays
Papers that mentioned: 1
cran: mixsmsn
Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions
Papers that mentioned: 1
bioconductor: proteinProfiles
Protein Profiling
Papers that mentioned: 1
cran: MixTwice
Large-Scale Hypothesis Testing by Variance Mixing
Papers that mentioned: 1
cran: mkde
2D and 3D Movement-Based Kernel Density Estimates (MKDEs)
Papers that mentioned: 1
bioconductor: profileScoreDist
Profile score distributions
Papers that mentioned: 1
cran: MLCM
Maximum Likelihood Conjoint Measurement
Papers that mentioned: 1
bioconductor: proFIA
Preprocessing of FIA-HRMS data
Papers that mentioned: 1
cran: MLEcens
Computation of the MLE for Bivariate Interval Censored Data
Papers that mentioned: 1
cran: mlegp
Maximum Likelihood Estimates of Gaussian Processes
Papers that mentioned: 1
bioconductor: proBAMr
Generating SAM file for PSMs in shotgun proteomics data
Papers that mentioned: 1
bioconductor: prebs
Probe region expression estimation for RNA-seq data for improved microarray comparability
Papers that mentioned: 1
cran: mlmm.gwas
Pipeline for GWAS Using MLMM
Papers that mentioned: 1
cran: gpairs
The Generalized Pairs Plot
Papers that mentioned: 1
bioconductor: powerTCR
Model-Based Comparative Analysis of the TCR Repertoire
Papers that mentioned: 1
cran: GOxploreR
Structural Exploration of the Gene Ontology (GO) Knowledge Base
Papers that mentioned: 1
bioconductor: podkat
Position-Dependent Kernel Association Test
Papers that mentioned: 1
bioconductor: PoDCall
Positive Droplet Calling for DNA Methylation Droplet Digital PCR
Papers that mentioned: 1
cran: MM4LMM
Inference of Linear Mixed Models Through MM Algorithm
Papers that mentioned: 1
bioconductor: plethy
R framework for exploration and analysis of respirometry data
Papers that mentioned: 1
cran: MMAC
Data for Mathematical Modeling and Applied Calculus
Papers that mentioned: 1
bioconductor: planet
Placental DNA methylation analysis tools
Papers that mentioned: 1
bioconductor: pipeComp
pipeComp pipeline benchmarking framework
Papers that mentioned: 1
cran: mmeta
Multivariate Meta-Analysis
Papers that mentioned: 1
cran: MMLR
Fitting Markov-Modulated Linear Regression Models
Papers that mentioned: 1
bioconductor: pcxn
Exploring, analyzing and visualizing functions utilizing the pcxnData package
Papers that mentioned: 1
cran: MNLpred
Simulated Predicted Probabilities for Multinomial Logit Models
Papers that mentioned: 1
cran: lmDiallel
Linear Fixed/Mixed Effects Models for Diallel Crosses
Papers that mentioned: 1
cran: mnreadR
MNREAD Parameters Estimation and Curve Plotting
Papers that mentioned: 1
cran: LLSR
Data Analysis of Liquid-Liquid Systems using R
Papers that mentioned: 1
cran: LKT
Logistic Knowledge Tracing
Papers that mentioned: 1
cran: listdtr
List-Based Rules for Dynamic Treatment Regimes
Papers that mentioned: 1
cran: list
Statistical Methods for the Item Count Technique and List Experiment
Papers that mentioned: 1
cran: Modalclust
Hierarchical Modal Clustering
Papers that mentioned: 1
cran: lipidomeR
Integrative Visualizations of the Lipidome
Papers that mentioned: 1
cran: LINselect
Selection of Linear Estimators
Papers that mentioned: 1
cran: modMax
Community Structure Detection via Modularity Maximization
Papers that mentioned: 1
cran: linearModel
Linear Model Functions
Papers that mentioned: 1
cran: lilikoi
Metabolomics Personalized Pathway Analysis Tool
Papers that mentioned: 1
cran: GNRS
Access the 'Geographic Name Resolution Service'
Papers that mentioned: 1
cran: lift
Compute the Top Decile Lift and Plot the Lift Curve
Papers that mentioned: 1
cran: monographaR
Taxonomic Monographs Tools
Papers that mentioned: 1
cran: MonoPhy
Explore Monophyly of Taxonomic Groups in a Phylogeny
Papers that mentioned: 1
cran: LifeTables
Two-Parameter HMD Model Life Table System
Papers that mentioned: 1
cran: morse
Modelling Reproduction and Survival Data in Ecotoxicology
Papers that mentioned: 1
cran: MortCast
Estimation and Projection of Age-Specific Mortality Rates
Papers that mentioned: 1
cran: gnomonicM
Estimate Natural Mortality for Different Life Stages
Papers that mentioned: 1
cran: LeMaRns
Length-Based Multispecies Analysis by Numerical Simulation
Papers that mentioned: 1
cran: leafSTAR
Silhouette to Area Ratio of Tilted Surfaces
Papers that mentioned: 1
cran: moveVis
Movement Data Visualization
Papers that mentioned: 1
cran: MPAgenomics
Multi-Patient Analysis of Genomic Markers
Papers that mentioned: 1
cran: ldamatch
Selection of Statistically Similar Research Groups
Papers that mentioned: 1
cran: MPCI
Multivariate Process Capability Indices (MPCI)
Papers that mentioned: 1
cran: mpm
Multivariate Projection Methods
Papers that mentioned: 1
cran: mpmcorrelogram
Multivariate Partial Mantel Correlogram
Papers that mentioned: 1
cran: lcc
Longitudinal Concordance Correlation
Papers that mentioned: 1
cran: mpr
Multi-Parameter Regression (MPR)
Papers that mentioned: 1
cran: lbm
Log Binomial Regression Model in Exact Method
Papers that mentioned: 1
cran: lazyWeave
LaTeX Wrappers for R Users
Papers that mentioned: 1
cran: MPsychoR
Modern Psychometrics with R
Papers that mentioned: 1
cran: mpt
Multinomial Processing Tree Models
Papers that mentioned: 1
bioconductor: panelcn.mops
CNV detection tool for targeted NGS panel data
Papers that mentioned: 1
bioconductor: pandaR
PANDA Algorithm
Papers that mentioned: 1
cran: mratios
Ratios of Coefficients in the General Linear Model
Papers that mentioned: 1
cran: MRCE
Multivariate Regression with Covariance Estimation
Papers that mentioned: 1
cran: gmeta
Meta-Analysis via a Unified Framework of Confidence Distribution
Papers that mentioned: 1
cran: GMDH
Short Term Forecasting via GMDH-Type Neural Network Algorithms
Papers that mentioned: 1
cran: mrfDepth
Depth Measures in Multivariate, Regression and Functional Settings
Papers that mentioned: 1
bioconductor: paircompviz
Multiple comparison test visualization
Papers that mentioned: 1
bioconductor: OTUbase
Provides structure and functions for the analysis of OTU data
Papers that mentioned: 1
bioconductor: OpenStats
A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association
Papers that mentioned: 1
cran: mro
Multiple Correlation
Papers that mentioned: 1
bioconductor: openPrimeR
Multiplex PCR Primer Design and Analysis
Papers that mentioned: 1
cran: ms.sev
Package for Calculation of ARMSS, Local MSSS and Global MSSS
Papers that mentioned: 1
bioconductor: oneSENSE
One-Dimensional Soli-Expression by Nonlinear Stochastic Embedding (OneSENSE)
Papers that mentioned: 1
cran: MSCMT
Multivariate Synthetic Control Method Using Time Series
Papers that mentioned: 1
bioconductor: OMICsPCA
An R package for quantitative integration and analysis of multiple omics assays from heterogeneous samples
Papers that mentioned: 1
cran: msgps
Degrees of Freedom of Elastic Net, Adaptive Lasso and Generalized Elastic Net
Papers that mentioned: 1
bioconductor: omicplotR
Visual Exploration of Omic Datasets Using a Shiny App
Papers that mentioned: 1
bioconductor: npGSEA
Permutation approximation methods for gene set enrichment analysis (non-permutation GSEA)
Papers that mentioned: 1
cran: MSwM
Fitting Markov Switching Models
Papers that mentioned: 1
cran: lassoshooting
L1 Regularized Regression (Lasso) Solver using the Cyclic Coordinate Descent Algorithm aka Lasso Shooting
Papers that mentioned: 1
cran: MTAR
Multi-Trait Analysis of Rare-Variant Association Study
Papers that mentioned: 1
cran: LARF
Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects
Papers that mentioned: 1
cran: GmAMisc
'Gianmarco Alberti' Miscellaneous
Papers that mentioned: 1
cran: mtsdi
Multivariate Time Series Data Imputation
Papers that mentioned: 1
cran: landsepi
Landscape Epidemiology and Evolution
Papers that mentioned: 1
cran: landpred
Landmark Prediction of a Survival Outcome
Papers that mentioned: 1
cran: landest
Landmark Estimation of Survival and Treatment Effect
Papers that mentioned: 1
bioconductor: nnNorm
Spatial and intensity based normalization of cDNA microarray data based on robust neural nets
Papers that mentioned: 1
pypi: Anemone
Monitor long running analyses by remote plotting of selected variables
Papers that mentioned: 1
cran: glrt
Generalized Logrank Tests for Interval-censored Failure Time Data
Papers that mentioned: 1
pypi: Anika
this is just a test, please ignore it
Papers that mentioned: 1
pypi: ani.py
Python interface for anime APIs
Papers that mentioned: 1
pypi: anki

Papers that mentioned: 1