Packages with Software Mentions in Scientific Papers

pypi: spgl1

SPGL1: A solver for large-scale sparse reconstruction.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pyramid-arima

Python's forecast::auto.arima equivalent
Papers that mentioned: 1

Very Likely Science (95)

Pyreport makes notes out of a python script. It can run the script in a sandbox and capture its output. It allows for embedding RestructuredText or LaTeX comments in the code for literate programming and generates a report made of the literate comments, the code, pretty printed, and the output of the script (pyreport can capture pylab figures). This is useful for documentations, making tutorials, but also for sharing python-based calculations with colleagues.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pyret

Tools for the analysis of neural electrophysiology data
Papers that mentioned: 1

Very Likely Science (100)

cran: predict3d

Draw Three Dimensional Predict Plot Using Package 'rgl'
Papers that mentioned: 1

Very Likely Science (70)

pypi: spi

Pure Python SPI Interface using spidev
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyRserve

A Python client to remotely access the R statistic package via network
Papers that mentioned: 1

Very Likely Science (90)

pypi: pyrtlsdr

A Python wrapper for librtlsdr (a driver for Realtek RTL2832U based SDR's)
Papers that mentioned: 1

Very Likely Science (65)

pypi: spidev

Python bindings for Linux SPI access through spidev
Papers that mentioned: 1

Likely Science (40)

pypi: spikeinterface

Python toolkit for analysis, visualization, and comparison of spike sorting output
Papers that mentioned: 1

Very Likely Science (90)

pypi: PyscesToolbox

A set of metabolic model analysis tools for PySCeS.
Papers that mentioned: 1

Very Likely Science (100)

pypi: strf

string format locals
Papers that mentioned: 1

Very Likely Science (65)

pypi: PySimpleGUI

Python GUIs for Humans. Launched in 2018. It's 2022 & PySimpleGUI is an ACTIVE & supported project. Super-simple to create custom GUI's. 325+ Demo programs & Cookbook for rapid start. Extensive documentation. Main docs at www.PySimpleGUI.org. Fun & your success are the focus. Examples using Machine Learning (GUI, OpenCV Integration), Rainmeter Style Desktop Widgets, Matplotlib + Pyplot, PIL support, add GUI to command line scripts, PDF & Image Viewers. Great for beginners & advanced GUI programmers.
Papers that mentioned: 1

Very Likely Science (90)

pypi: spikely

Spike sorting made simple
Papers that mentioned: 1

Very Likely Science (100)

cran: BayesCombo

Bayesian Evidence Combination
Papers that mentioned: 1

Very Likely Science (89)

pypi: GoogleAppEnginePipeline

Enable asynchronous pipeline style data processing on App Engine
Papers that mentioned: 1

Likely Science (40)

pypi: spikesorters

Python wrappers for popular spike sorters
Papers that mentioned: 1

Very Likely Science (100)

pypi: PythonCyc

A Python interface to Pathway Tools, 2019 update
Papers that mentioned: 1

Very Likely Science (100)

cran: BALLI

Expression RNA-Seq Data Analysis Based on Linear Mixed Model
Papers that mentioned: 1

Very Likely Science (93)

pypi: spiketoolkit

Python toolkit for analysis, visualization, and comparison of spike sorting output
Papers that mentioned: 1

Very Likely Science (95)

pypi: python-graph

A library for working with graphs in Python
Papers that mentioned: 1

Very Likely Science (80)

pypi: pythongrid

High-level python wapper for the Sun Grid Engine (SGE) using DRMAA and ZMQ
Papers that mentioned: 1

Very Likely Science (65)

cran: backbone

Extracts the Backbone from Graphs
Papers that mentioned: 1

Very Likely Science (100)

pypi: python-rocksdb

Python bindings for RocksDB
Papers that mentioned: 1

Very Likely Science (65)

cran: BaBooN

Bayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data
Papers that mentioned: 1

Very Likely Science (85)

cran: babar

Bayesian Bacterial Growth Curve Analysis in R
Papers that mentioned: 1

Very Likely Science (85)

pypi: pytleap

Interface to connect to a TP-Link EAP.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pytl

Command line tool that parses python file, enumerates classes and methods as a tree structure.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pytoda

pytoda: PaccMann PyTorch Dataset Classes.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pytsa

Simple, human-readable, fully tested, signature-preserving Python decorators to ensure your method abides to its contract.
Papers that mentioned: 1

Very Likely Science (65)

pypi: SpiNNakerGraphFrontEnd

Front end to the SpiNNaker tool chain which uses a basic graph
Papers that mentioned: 1

Very Likely Science (100)

pypi: PyTumblr

A Python Tumblr API v2 Client
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyTTE

Package to compute X-ray diffraction curves of bent crystals by numerically solving the 1D Takagi-Taupin equation.
Papers that mentioned: 1

Very Likely Science (85)

pypi: PyWavefront

Python library for importing Wavefront .obj files
Papers that mentioned: 1

Very Likely Science (100)

pypi: pywindow

My short description for my project.
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyX

Python package for the generation of PostScript, PDF, and SVG files
Papers that mentioned: 1

Very Likely Science (80)

pypi: spl

Spigot/Bukkit Plugin Manager
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyxmolpp2

Utils for processing MD
Papers that mentioned: 1

Very Likely Science (65)

pypi: Gooey

Turn (almost) any command line program into a full GUI application with one line
Papers that mentioned: 1

Very Likely Science (65)

pypi: metasearch

Pre built metasearch repository for easy uses.
Papers that mentioned: 1

Very Likely Science (65)

pypi: splicer

the world is a database now you can query it with SQL
Papers that mentioned: 1

Very Likely Science (65)

cran: audio

Audio Interface for R
Papers that mentioned: 1

Very Likely Science (75)

pypi: q2-micom

QIIME 2 plugin for metabolic modeling of microbial communities.
Papers that mentioned: 1

Very Likely Science (100)

cran: prcbench

Testing Workbench for Precision-Recall Curves
Papers that mentioned: 1

Very Likely Science (100)

pypi: QCluster

An SDK to enable quick clustering of microservices.
Papers that mentioned: 1

Very Likely Science (100)

pypi: qd

QD-Engineering Python Library for CAE
Papers that mentioned: 1

Very Likely Science (80)

pypi: qdiv

Microbial diversity calculations
Papers that mentioned: 1

Likely Science (55)

pypi: qic

data(JSON/XML/YAML) command line query tools with interactive mode.
Papers that mentioned: 1

Very Likely Science (65)

cran: agridat

Agricultural Datasets
Papers that mentioned: 1

Very Likely Science (75)

pypi: eulerangles

Simplify the handling of large sets of Euler angles in Python
Papers that mentioned: 1

Very Likely Science (65)

cran: BoolFilter

Optimal Estimation of Partially Observed Boolean Dynamical Systems
Papers that mentioned: 1

Very Likely Science (83)

pypi: qp

A web-application framework.
Papers that mentioned: 1

Very Likely Science (65)

pypi: sushi

Create package template for everything
Papers that mentioned: 1

Very Likely Science (65)

pypi: gon

Processing of planar geometries.
Papers that mentioned: 1

Very Likely Science (85)

pypi: QPT

QPT-基于Python的快捷环境封装工具
Papers that mentioned: 1

Very Likely Science (65)

pypi: tigreBrowser

Gene expression model browser for results from tigre R package (http://www.bioconductor.org/packages/release/bioc/html/tigre.html)
Papers that mentioned: 1

Very Likely Science (100)

pypi: scluster

an implementation of spectral clustering for text document collections
Papers that mentioned: 1

Very Likely Science (71)

pypi: qsim

A simple package for simulating quantum circuits.
Papers that mentioned: 1

Very Likely Science (80)

pypi: spopt

Spatial Optimization in PySAL
Papers that mentioned: 1

Very Likely Science (100)

pypi: qstats

SGE qstat info
Papers that mentioned: 1

Very Likely Science (85)

cran: Mcomp

Data from the M-Competitions
Papers that mentioned: 1

Very Likely Science (100)

pypi: quantile

Python Implementation of Graham Cormode and S. Muthukrishnan's Effective Computation of Biased Quantiles over Data Streams in ICDE'05
Papers that mentioned: 1

Very Likely Science (80)

pypi: til

Keep track of things you learn each day
Papers that mentioned: 1

Very Likely Science (65)

pypi: quartz

Track events in other applications
Papers that mentioned: 1

Very Likely Science (65)

pypi: golden

Python library to extract data from tech companies and topics.
Papers that mentioned: 1

Very Likely Science (65)

pypi: Covid19India

A Python3 Library to get India's Covid-19 Patient Count.
Papers that mentioned: 1

Very Likely Science (65)

pypi: questioner

A lightweight Python interface for annotating things.
Papers that mentioned: 1

Very Likely Science (85)

pypi: questions

Questions is a form library that uses the power of SurveyJS for the UI.
Papers that mentioned: 1

Very Likely Science (65)

pypi: timer

Python Code Timer
Papers that mentioned: 1

Very Likely Science (65)

pypi: triangulation

3D triangulation algorithms
Papers that mentioned: 1

Very Likely Science (95)

pypi: spread

CSV Spreadsheet library
Papers that mentioned: 1

Very Likely Science (65)

pypi: zeta

SCM and Project Collaboration Suite
Papers that mentioned: 1

Very Likely Science (65)

cran: mecor

Measurement Error Correction in Linear Models with a Continuous Outcome
Papers that mentioned: 1

Very Likely Science (100)

pypi: spreg

PySAL Spatial Econometric Regression in Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: spseg

A segmentation and postagging tool package
Papers that mentioned: 1

Very Likely Science (65)

pypi: r2d2

some handy functions
Papers that mentioned: 1

Very Likely Science (65)

pypi: SPTE

Simple Python Template Engine
Papers that mentioned: 1

Very Likely Science (65)

pypi: hyp

Partial JSON API implementation in Python on top of Schematics
Papers that mentioned: 1

Very Likely Science (65)

pypi: neighborhood

Neighborhood Algorithm Optimization and Ensemble Appraisal
Papers that mentioned: 1

Very Likely Science (100)

pypi: neighbors

A Python package for performing collaborative filtering on social and emotion datasets
Papers that mentioned: 1

Very Likely Science (100)

pypi: Neil

A utility program to generate boilerplate code/text from templates.
Papers that mentioned: 1

Unlikely Science (15)

pypi: plant

Filesystem for humans
Papers that mentioned: 1

Very Likely Science (85)

pypi: ICONCLASS

A multilingual subject classification system for cultural content
Papers that mentioned: 1

Very Likely Science (65)

pypi: ncbi-taxonomist

Toolbox to manage NCBI taxonomical data
Papers that mentioned: 1

Very Likely Science (100)

cran: recommenderlab

Lab for Developing and Testing Recommender Algorithms
Papers that mentioned: 1

Very Likely Science (100)

pypi: NetComp

Network Comparison
Papers that mentioned: 1

Very Likely Science (75)

pypi: netrd

netrd: A library for network {reconstruction, distances, dynamics}
Papers that mentioned: 1

Very Likely Science (100)

pypi: timeseries

Time series modelling and analysis
Papers that mentioned: 1

Very Likely Science (75)

cran: SCtools

Extensions for Synthetic Controls Analysis
Papers that mentioned: 1

Very Likely Science (93)

cran: SoundShape

Sound Waves Onto Morphometric Data
Papers that mentioned: 1

Very Likely Science (100)

pypi: Rach

Python client for Rach
Papers that mentioned: 1

Likely Science (40)

cran: rasterdiv

Diversity Indices for Numerical Matrices
Papers that mentioned: 1

Very Likely Science (100)

cran: rare

Linear Model with Tree-Based Lasso Regularization for Rare Features
Papers that mentioned: 1

Very Likely Science (100)

cran: scorecard

Credit Risk Scorecard
Papers that mentioned: 1

Very Likely Science (75)

cran: scdhlm

Estimating Hierarchical Linear Models for Single-Case Designs
Papers that mentioned: 1

Very Likely Science (100)

pypi: navis

Neuron Analysis and Visualization library
Papers that mentioned: 1

Very Likely Science (100)

pypi: imperial

A mirror package for imperial.py. Please install that instead.
Papers that mentioned: 1

Very Likely Science (65)

pypi: importance

Papers that mentioned: 1

Very Likely Science (65)

cran: SPAtest

Score Test and Meta-Analysis Based on Saddlepoint Approximation
Papers that mentioned: 1

Very Likely Science (93)

pypi: ey

Simple and easy-to-use library for executing shell commands saving data to the file system without re-executing already executed tasks.
Papers that mentioned: 1

Very Likely Science (80)