Packages with Software Mentions in Scientific Papers

Quality Control (QC), Visualization/plotting, and postprocessing software for Illumina methylation array data. See https://life-epigenetics-methylcheck.readthedocs-hosted.com/en/latest/ for full documentation and examples.
Papers that mentioned: 1

Very Likely Science (100)

pypi: any

Command Line Interface for Anyscale
Papers that mentioned: 1

Very Likely Science (65)

pypi: methylnet

A modular deep learning approach for Methylation Predictions.
Papers that mentioned: 1

Very Likely Science (100)

pypi: uce

µce
Papers that mentioned: 1

Very Likely Science (65)

pypi: tarsier

describe() on steroids - DASKified
Papers that mentioned: 1

Very Likely Science (65)

pypi: carpentry

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: genepy

Simple genetic programming library using tree representation for individuals
Papers that mentioned: 1

Very Likely Science (90)

pypi: TControl

用于自动控制系统分析的Python库。
Papers that mentioned: 1

Very Likely Science (65)

pypi: omnibus

omnibus.
Papers that mentioned: 1

Very Likely Science (65)

pypi: comtypes

Pure Python COM package
Papers that mentioned: 1

Very Likely Science (85)

pypi: genepy3d

Python Library for 3D Quantitative Geometry in Computation Microscopy
Papers that mentioned: 1

Very Likely Science (100)

pypi: hx

Papers that mentioned: 1

Unlikely Science (0)

pypi: ssz

ssz: Python implementation of the Simple Serialization encoding and decoding
Papers that mentioned: 1

Very Likely Science (85)

pypi: omniidl

omniidl library for writing backends
Papers that mentioned: 1

Very Likely Science (65)

pypi: carto

SDK around CARTO's APIs
Papers that mentioned: 1

Very Likely Science (100)

pypi: unicodecsv

Python2's stdlib csv module is nice, but it doesn't support unicode. This module is a drop-in replacement which *does*.
Papers that mentioned: 1

Very Likely Science (65)

pypi: aoa

Python client for Teradata AnalyticOps Accelerator (AOA)
Papers that mentioned: 1

Very Likely Science (65)

pypi: httpie

HTTPie: modern, user-friendly command-line HTTP client for the API era.
Papers that mentioned: 1

Very Likely Science (80)

pypi: onnx

Open Neural Network Exchange
Papers that mentioned: 1

Very Likely Science (100)

pypi: opencv-contrib-python

Wrapper package for OpenCV python bindings.
Papers that mentioned: 1

Very Likely Science (80)

cran: wvtool

Papers that mentioned: 1

Unlikely Science (0)

cran: XBRL

Extraction of Business Financial Information from 'XBRL' Documents
Papers that mentioned: 1

Likely Science (58)

pypi: rosapi

Routerboard API
Papers that mentioned: 1

Very Likely Science (65)

pypi: generics

A classy toolkit designed with OOP in mind.
Papers that mentioned: 1

Very Likely Science (65)

cran: seismic

Predict Information Cascade by Self-Exciting Point Process
Papers that mentioned: 1

Very Likely Science (75)

cran: sen2r

Find, Download and Process Sentinel-2 Data
Papers that mentioned: 1

Very Likely Science (75)

cran: LAGOSNE

Interface to the Lake Multi-Scaled Geospatial and Temporal Database
Papers that mentioned: 1

Very Likely Science (100)

cran: WorldFlora

Standardize Plant Names According to World Flora Online Taxonomic Backbone
Papers that mentioned: 1

Very Likely Science (75)

cran: sensmediation

Parametric Estimation and Sensitivity Analysis of Direct and Indirect Effects
Papers that mentioned: 1

Very Likely Science (85)

cran: seqgendiff

RNA-Seq Generation/Modification for Simulation
Papers that mentioned: 1

Very Likely Science (95)

pypi: Colonyzer2

Image analysis for microbial cultures growing on solid agar surfaces
Papers that mentioned: 1

Very Likely Science (90)

pypi: CommonPart

tools model
Papers that mentioned: 1

Very Likely Science (65)

cran: seasonal

R Interface to X-13-ARIMA-SEATS
Papers that mentioned: 1

Very Likely Science (75)

pypi: metro

Metro framework for Airflow
Papers that mentioned: 1

Very Likely Science (65)

cran: xtal

Crystallization Toolset
Papers that mentioned: 1

Very Likely Science (75)

cran: SASxport

Papers that mentioned: 1

Unlikely Science (0)

pypi: team

Papers that mentioned: 1

Unlikely Science (0)

cran: scrapeR

Papers that mentioned: 1

Unlikely Science (0)

pypi: case

Python unittest Utilities
Papers that mentioned: 1

Very Likely Science (65)

pypi: ao

a minimal example package (pure python version)
Papers that mentioned: 1

Very Likely Science (65)

pypi: apap

Declarative and handy RESTful client factory
Papers that mentioned: 1

Very Likely Science (65)

pypi: ohsome

A Python client for the ohsome API
Papers that mentioned: 1

Very Likely Science (100)

pypi: rover

Tool for the robust retrieval of seismic data
Papers that mentioned: 1

Very Likely Science (100)

pypi: catalogue

Super lightweight function registries for your library
Papers that mentioned: 1

Very Likely Science (80)

pypi: CMakeCatchTemplate

A template project, to enable people to build nicely structured C++ projects.
Papers that mentioned: 1

Very Likely Science (80)

pypi: osqp

OSQP: The Operator Splitting QP Solver
Papers that mentioned: 1

Very Likely Science (65)

pypi: Underscore

Obfuscating code by changing the variable names to underscores
Papers that mentioned: 1

Very Likely Science (65)

pypi: catcher

Microservices automated test tool.
Papers that mentioned: 1

Very Likely Science (65)

pypi: catenae

Python library for easy development of scalable stream processing topologies.
Papers that mentioned: 1

Very Likely Science (65)

pypi: yall

Yet Another Lazy Loader for Python
Papers that mentioned: 1

Very Likely Science (65)

cran: dotenv

Load Environment Variables from '.env'
Papers that mentioned: 1

Very Likely Science (75)

pypi: OIPA

A fork of https://github.com/zimmerman-zimmerman/OIPA used at Catalpa.
Papers that mentioned: 1

Very Likely Science (65)

cran: mtsdi

Multivariate Time Series Data Imputation
Papers that mentioned: 1

Very Likely Science (85)

pypi: coplot

A personal plotting library that commonly used in the research of cosmology and astrophysics.
Papers that mentioned: 1

Very Likely Science (75)

pypi: ReEncrypt

A Encryption Method
Papers that mentioned: 1

Very Likely Science (65)

pypi: tellurium

Tellurium: An biological modeling environment for Python
Papers that mentioned: 1

Very Likely Science (75)

pypi: telomerehunter

Estimation of Telomere Content from WGS Data
Papers that mentioned: 1

Very Likely Science (65)

pypi: ter

Papers that mentioned: 1

Unlikely Science (0)

pypi: PartSeg

PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,
Papers that mentioned: 1

Very Likely Science (100)

pypi: textblob

Simple, Pythonic text processing. Sentiment analysis, part-of-speech tagging, noun phrase parsing, and more.
Papers that mentioned: 1

Very Likely Science (70)

pypi: cbase

Collective Knowledge DataBase
Papers that mentioned: 1

Very Likely Science (85)

pypi: ensembler

A python package for ensemling models via Stacking/Bleanding, bagging etc
Papers that mentioned: 1

Very Likely Science (65)

pypi: ko

Papers that mentioned: 1

Very Likely Science (65)

pypi: package1

Papers that mentioned: 1

Unlikely Science (0)

pypi: CBGT

CBGT contains code for implementing the CBGT network and drift-diffusion model (DDM) fits described in the manuscript Reward-driven changes in striatal pathway competition shape evidence evaluation in decision-making.
Papers that mentioned: 1

Very Likely Science (100)

cran: PredCRG

Computational Prediction of Proteins Encoded by Circadian Genes
Papers that mentioned: 1

Very Likely Science (85)

pypi: Cozy

用于判断回文第一个对外发布的模块，测试
Papers that mentioned: 1

Very Likely Science (65)