Packages with Software Mentions in Scientific Papers

pypi: mafs

Quickly conjure up virtual fileysystems
Papers that mentioned: 1

Very Likely Science (65)

Takes algorithm, train, test, X variables, Y variables, column names required for submission and name of submission file as input and produces an output csv for submitting in the competition.
Papers that mentioned: 1

Very Likely Science (75)

cran: phytotools

Phytoplankton Production Tools
Papers that mentioned: 1

Very Likely Science (75)

pypi: lizard

A code analyzer without caring the C/C++ header files. It works with Java, C/C++, JavaScript, Python, Ruby, Swift, Objective C. Metrics includes cyclomatic complexity number etc.
Papers that mentioned: 1

Very Likely Science (85)

pypi: Maki

minimalist functional library
Papers that mentioned: 1

Very Likely Science (65)

cran: RGenetics

R packages for genetics research
Papers that mentioned: 1

Very Likely Science (85)

pypi: cite

Command line tool to turn DOIs into citations
Papers that mentioned: 1

Very Likely Science (100)

cran: mlegp

Maximum Likelihood Estimates of Gaussian Processes
Papers that mentioned: 1

Very Likely Science (83)

cran: MLEcens

Computation of the MLE for Bivariate Interval Censored Data
Papers that mentioned: 1

Very Likely Science (75)

pypi: ledapy

Ledapy is a minimal port of Ledalab (www.ledalab.de) for Python
Papers that mentioned: 1

Very Likely Science (100)

cran: swirlify

A Toolbox for Writing 'swirl' Courses
Papers that mentioned: 1

Very Likely Science (75)

cran: MLCM

Maximum Likelihood Conjoint Measurement
Papers that mentioned: 1

Very Likely Science (75)

pypi: EXONEST

Papers that mentioned: 1

Very Likely Science (65)

pypi: minorminer

heuristic algorithm to find graph minor embeddings
Papers that mentioned: 1

Very Likely Science (81)

cran: symbolicDA

Analysis of Symbolic Data
Papers that mentioned: 1

Very Likely Science (85)

pypi: toxin

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

cran: rinat

Access 'iNaturalist' Data Through APIs
Papers that mentioned: 1

Likely Science (50)

cran: taxlist

Handling Taxonomic Lists
Papers that mentioned: 1

Very Likely Science (75)

pypi: min

A simple printer of nested list
Papers that mentioned: 1

Very Likely Science (65)

pypi: orbkit

A Toolbox for Post-Processing Quantum Chemical Wavefunction Data
Papers that mentioned: 1

Very Likely Science (80)

cran: rIP

Detects Fraud in Online Surveys by Tracing, Scoring, and Visualizing IP Addresses
Papers that mentioned: 1

Very Likely Science (83)

pypi: fnc

Functional programming in Python with generators and other utilities.
Papers that mentioned: 1

Likely Science (40)

cran: DeducerPlugInScaling

Reliability and factor analysis plugin
Papers that mentioned: 1

Very Likely Science (60)

pypi: legato

Papers that mentioned: 1

Unlikely Science (0)

pypi: mlab

Mlab is a high-level python to Matlab bridge that lets Matlab look like a normal python library
Papers that mentioned: 1

Very Likely Science (85)

cran: miRtest

Combined miRNA- And mRNA-Testing
Papers that mentioned: 1

Very Likely Science (75)

pypi: mints

Clean and elegant CLI development kit
Papers that mentioned: 1

Very Likely Science (75)

pypi: manipulation

MIT 6.421 - Robotic Manipulation
Papers that mentioned: 1

Very Likely Science (65)

pypi: cividis

Register `cividis` with matplotlib, a color map optimized for color vision deficiency, as published in Nuñez, et al. (2018), PLoS ONE 13(7): e0199239 .
Papers that mentioned: 1

Very Likely Science (65)

pypi: frags

Finding recombinations in reads
Papers that mentioned: 1

Very Likely Science (80)

pypi: Lectio

A Lectio API, used for accessing lectio.dk
Papers that mentioned: 1

Very Likely Science (65)

pypi: allostery

This package deals with analysis of MD trajectories in order to understantd allostery.
Papers that mentioned: 1

Very Likely Science (75)

pypi: Millet

A simple framework for building complex dialogue systems.
Papers that mentioned: 1

Very Likely Science (65)

pypi: kontroller

Python lib for kubernetes controllers
Papers that mentioned: 1

Very Likely Science (65)

cran: milorGWAS

Mixed Logistic Regression for Genome-Wide Analysis Studies (GWAS)
Papers that mentioned: 1

Very Likely Science (85)

cran: TEQR

Target Equivalence Range Design
Papers that mentioned: 1

Very Likely Science (75)

cran: Ternary

Create Ternary and Holdridge Plots
Papers that mentioned: 1

Very Likely Science (100)

pypi: MiniML

MiniML - a minimal machine learning API based on Apache MADlib and PostgreSQL
Papers that mentioned: 1

Very Likely Science (90)

cran: textreuse

Detect Text Reuse and Document Similarity
Papers that mentioned: 1

Very Likely Science (95)

cran: cvms

Cross-Validation for Model Selection
Papers that mentioned: 1

Very Likely Science (100)

pypi: correlate

Correlates two sets of data by matching
Papers that mentioned: 1

Very Likely Science (65)

pypi: mirror

Mirror for open source mirror site to sync files
Papers that mentioned: 1

Very Likely Science (65)

pypi: traffic

A toolbox for manipulating and analysing air traffic data
Papers that mentioned: 1

Very Likely Science (100)

pypi: fuchsia

Fuchsia reduces differential equations for Feynman master integrals to canonical form
Papers that mentioned: 1

Very Likely Science (90)

pypi: TranscriptSim

Package for Coaching Session Transcripts Similarity Calculations
Papers that mentioned: 1

Very Likely Science (65)

pypi: aladin

Analysis of large-dimensional data in neuroscience
Papers that mentioned: 1

Very Likely Science (75)

cran: RSocrata

Download or Upload 'Socrata' Data Sets
Papers that mentioned: 1

Very Likely Science (65)

pypi: kafka-python

Pure Python client for Apache Kafka
Papers that mentioned: 1

Very Likely Science (85)

pypi: BayesASE

Bayesian analysis of allele specific expression
Papers that mentioned: 1

Very Likely Science (100)

pypi: jsonschema

An implementation of JSON Schema validation for Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: jscatter

Combines dataArrays with attributes for fitting plotting and analysis including models for Xray and neutron scattering
Papers that mentioned: 1

Very Likely Science (90)

cran: junctions

The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
Papers that mentioned: 1

Very Likely Science (75)

pypi: funniest

The funniest joke in the world
Papers that mentioned: 1

Very Likely Science (65)

cran: cubature

Adaptive Multivariate Integration over Hypercubes
Papers that mentioned: 1

Very Likely Science (100)

pypi: alea

Papers that mentioned: 1

Very Likely Science (65)

pypi: JSNMF

Papers that mentioned: 1

Unlikely Science (0)

pypi: enki

A Python library to analyze PYBOSSA project's results
Papers that mentioned: 1

Very Likely Science (95)

pypi: bayes

Bayes classification implementation
Papers that mentioned: 1

Very Likely Science (65)

pypi: treelab

Papers that mentioned: 1

Very Likely Science (65)

pypi: mod-wsgi

Installer for Apache/mod_wsgi.
Papers that mentioned: 1

Very Likely Science (100)

cran: RMKdiscrete

Sundry Discrete Probability Distributions
Papers that mentioned: 1

Very Likely Science (83)

pypi: classes

Smart, pythonic, ad-hoc, typed polymorphism for Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: saenopy

Semi-elastic fiber optimisation in python.
Papers that mentioned: 1

Very Likely Science (65)

pypi: miRge-build

miRge-build: Building libraries of small RNA sequencing Data
Papers that mentioned: 1

Very Likely Science (100)

pypi: monai

AI Toolkit for Healthcare Imaging
Papers that mentioned: 1

Very Likely Science (100)

pypi: moniker

Simple batch file renaming tool.
Papers that mentioned: 1

Very Likely Science (65)

pypi: mono

Papers that mentioned: 1

Unlikely Science (0)

pypi: CMash

Fast and accurate set similarity estimation via containment min hash (for genomic datasets).
Papers that mentioned: 1

Very Likely Science (100)

pypi: garnett

Samples, parsers, and writers for formats used in the Glotzer Group.
Papers that mentioned: 1

Very Likely Science (80)

cran: vennplot

Venn Diagrams in 2D and 3D
Papers that mentioned: 1

Very Likely Science (75)

pypi: submitter

Simple SGE job submitter.
Papers that mentioned: 1

Very Likely Science (85)

cran: RSpectra

Solvers for Large-Scale Eigenvalue and SVD Problems
Papers that mentioned: 1

Very Likely Science (75)

pypi: mirmap

Comprehensive prediction of microRNA target repression strength | Vejnar et. al
Papers that mentioned: 1

Very Likely Science (100)

cran: spotifyr

R Wrapper for the 'Spotify' Web API
Papers that mentioned: 1

Very Likely Science (85)

pypi: battery

Command Line Utilities in Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: jetson-stats

Interactive system-monitor and process viewer for all NVIDIA Jetson [Orin, Xavier, Nano, TX] series
Papers that mentioned: 1

Very Likely Science (65)

cran: SteinIV

Semi-Parametric Stein-Like Estimator with Instrumental Variables
Papers that mentioned: 1

Very Likely Science (83)

pypi: jets

Papers that mentioned: 1

Unlikely Science (0)

cran: wavelets

Functions for Computing Wavelet Filters, Wavelet Transforms and Multiresolution Analyses
Papers that mentioned: 1

Very Likely Science (75)

cran: WaverR

Data Estimation using Weighted Averages of Multiple Regressions
Papers that mentioned: 1

Very Likely Science (85)

cran: wdm

Weighted Dependence Measures
Papers that mentioned: 1

Very Likely Science (75)

pypi: jaguar

Papers that mentioned: 1

Unlikely Science (0)

cran: RSSL

Implementations of Semi-Supervised Learning Approaches for Classification
Papers that mentioned: 1

Very Likely Science (91)

pypi: JavaCard

Papers that mentioned: 1

Unlikely Science (0)

pypi: jazz

Papers that mentioned: 1

Unlikely Science (0)

pypi: misa

MISA: a mixed samples analysis tool
Papers that mentioned: 1

Very Likely Science (100)

cran: weatherr

Tools for Handling and Scraping Instant Weather Forecast Feeds
Papers that mentioned: 1

Very Likely Science (75)

pypi: raspberry

food
Papers that mentioned: 1

Very Likely Science (65)

pypi: xtal

Tools to manipulate atomic trajectories
Papers that mentioned: 1

Very Likely Science (100)

cran: BigVAR

Dimension Reduction Methods for Multivariate Time Series
Papers that mentioned: 1

Very Likely Science (100)

pypi: ivy

The unified machine learning framework, enabling framework-agnostic functions, layers and libraries.
Papers that mentioned: 1

Very Likely Science (100)

cran: crs

Categorical Regression Splines
Papers that mentioned: 1

Very Likely Science (89)

pypi: gec

A ECC implementation via oop style abstract algebra
Papers that mentioned: 1

Very Likely Science (65)

pypi: cleanup

A simple command line utility that organises files in a directory into subdirectories.
Papers that mentioned: 1

Likely Science (40)

pypi: ADTM

Adaptive Data Tabulation Markup
Papers that mentioned: 1

Very Likely Science (65)

pypi: iter

Iter
Papers that mentioned: 1

Very Likely Science (65)

pypi: Misago

Misago is modern, fully featured forum application written in Python and ES6, powered by Django and React.js. It works out of the box and can be run alone or be connected to existing site with built in OAuth 2 client.
Papers that mentioned: 1

Very Likely Science (65)

pypi: IRTools

a computational toolset for detection and analysis of intron retention from RNA-Seq libraries
Papers that mentioned: 1

Very Likely Science (90)

pypi: javax

Papers that mentioned: 1

Unlikely Science (0)

pypi: moth

token system using MongoDB
Papers that mentioned: 1

Very Likely Science (65)