Packages with Software Mentions in Scientific Papers

pypi: f1

a simple
Papers that mentioned: 1

Very Likely Science (65)

pypi: mimeo

Scan genomes for internally repeated sequences, elements which are repetitive in another species, or high-identity HGT candidate regions between species.
Papers that mentioned: 1

Very Likely Science (80)

pypi: whippet

Install make based git hooks with ease.
Papers that mentioned: 1

Very Likely Science (65)

pypi: scallop

Robustness of single-cell clustering solutions.
Papers that mentioned: 1

Very Likely Science (96)

pypi: md-plot

Draws a mirrored density plot for each input column
Papers that mentioned: 1

Very Likely Science (80)

pypi: bids

bids: a template for small scientific Python projects
Papers that mentioned: 1

Very Likely Science (75)

cran: rwty

R We There Yet? Visualizing MCMC Convergence in Phylogenetics
Papers that mentioned: 1

Very Likely Science (85)

pypi: whiteboard

Take math notes in your browser
Papers that mentioned: 1

Very Likely Science (65)

pypi: wilson

Toolkit for effective field theories beyond the Standard Model
Papers that mentioned: 1

Very Likely Science (71)

pypi: beautifulsoup4

Screen-scraping library
Papers that mentioned: 1

Very Likely Science (65)

pypi: running

User-friendly running pace calculator
Papers that mentioned: 1

Very Likely Science (65)

pypi: sch

A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 1

Very Likely Science (65)

pypi: scapy

Scapy: interactive packet manipulation tool
Papers that mentioned: 1

Very Likely Science (80)

pypi: chrono

A (BSD licensed) context manager for timing execution.
Papers that mentioned: 1

Likely Science (40)

pypi: edgebox

Edgebox for MobiledgeX
Papers that mentioned: 1

Very Likely Science (65)

pypi: bedshift

BED file perturbations
Papers that mentioned: 1

Very Likely Science (80)

pypi: echopype

Enhancing the interoperability and scalability in analyzing ocean sonar data
Papers that mentioned: 1

Very Likely Science (100)

pypi: svk

adding number
Papers that mentioned: 1

Very Likely Science (65)

pypi: chrysalis

Chrysalis Python Cloud SDK for streaming live media
Papers that mentioned: 1

Likely Science (40)

pypi: edb

Core EdgeDB Namespace
Papers that mentioned: 1

Very Likely Science (80)

pypi: indy

Interactive command-line fuzzy file search, based off how Ctrl-P works in Sublime Text
Papers that mentioned: 1

Very Likely Science (65)

pypi: Factom

Papers that mentioned: 1

Very Likely Science (65)

cran: rrecsys

Environment for Evaluating Recommender Systems
Papers that mentioned: 1

Very Likely Science (75)

A software package for the integration of metrological input into an agent-based system for the consideration of measurement uncertainty in current industrial manufacturing processes.
Papers that mentioned: 1

Very Likely Science (100)

pypi: WordInfo

A library to find defintions, pos, synonyms, antonyms, and word origins. It is python 3 compatible and requires bs4 and urllib.request
Papers that mentioned: 1

Very Likely Science (65)

pypi: docutils

Docutils -- Python Documentation Utilities
Papers that mentioned: 1

Very Likely Science (65)

pypi: draft

Papers that mentioned: 1

Very Likely Science (65)

pypi: ecp

Eraple ECP (e-Commerce Platform)
Papers that mentioned: 1

Likely Science (40)

pypi: scvi-tools

Deep probabilistic analysis of single-cell omics data.
Papers that mentioned: 1

Very Likely Science (100)

pypi: scvi

Single-cell Variational Inference
Papers that mentioned: 1

Very Likely Science (100)

pypi: cider

Hassle-free bootstrapping using Homebrew.
Papers that mentioned: 1

Very Likely Science (65)

pypi: django-mongodb-engine

MongoDB backend for Django-nonrel
Papers that mentioned: 1

Very Likely Science (65)

pypi: sect

Geometries partitioning.
Papers that mentioned: 1

Very Likely Science (65)

pypi: seesaw

ArchiveTeam seesaw kit
Papers that mentioned: 1

Very Likely Science (65)

pypi: security

The security toolkit for the Python comminity.
Papers that mentioned: 1

Very Likely Science (65)

pypi: SeeMee

Application which detects which camera you're looking at
Papers that mentioned: 1

Very Likely Science (65)

pypi: diffractem

Some tools for working with serial electron microscopy data.
Papers that mentioned: 1

Very Likely Science (75)

cran: rrpack

Reduced-Rank Regression
Papers that mentioned: 1

Very Likely Science (93)

pypi: ding

Papers that mentioned: 1

Unlikely Science (0)

pypi: fanova

Functional ANOVA: an implementation of the ICML 2014 paper 'An Efficient Approach for Assessing Hyperparameter Importance' by Frank Hutter, Holger Hoos and Kevin Leyton-Brown.
Papers that mentioned: 1

Likely Science (55)

pypi: farsi

Python Persian Language Support
Papers that mentioned: 1

Very Likely Science (65)

pypi: cImage

Image manipulation library for media computation education
Papers that mentioned: 1

Very Likely Science (100)

pypi: jpylyzer

JP2 (JPEG 2000 Part 1) image validator and properties extractor
Papers that mentioned: 1

Very Likely Science (65)

pypi: giotto

Web development simplified. An MVC framework supporting Python 3.
Papers that mentioned: 1

Very Likely Science (85)

pypi: settings

Papers that mentioned: 1

Unlikely Science (0)

pypi: sharpe

sharpe
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: ceRNAnetsim

Regulation Simulator of Interaction between miRNA and Competing RNAs (ceRNA)
Papers that mentioned: 1

Very Likely Science (100)

pypi: dg

Papers that mentioned: 1

Very Likely Science (65)

pypi: eGUI

基于Python的GUI界面，函数使用中文命名，使用简单，界面丰富，上手方便，持续更新。
Papers that mentioned: 1

Very Likely Science (65)

pypi: workshop

webAppWorkshop tools and dependencies
Papers that mentioned: 1

Very Likely Science (65)

pypi: devkit

A tool to efficiently manage development environment
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: cBioPortalData

Exposes and makes available data from the cBioPortal web resources
Papers that mentioned: 1

Very Likely Science (100)

pypi: workspace

Workspace Overmind
Papers that mentioned: 1

Very Likely Science (65)

pypi: bbcflib

Utility modules for deploying workflows in the BBCF
Papers that mentioned: 1

Likely Science (55)

cran: rebmix

Finite Mixture Modeling, Clustering & Classification
Papers that mentioned: 1

Very Likely Science (93)

pypi: bbrc-validator

Systematic sanity checks on imaging datasets within an XNAT environment
Papers that mentioned: 1

Very Likely Science (80)

pypi: deicode

Robust Aitchison compositional biplots from sparse count data
Papers that mentioned: 1

Very Likely Science (80)

cran: rfigshare

An R Interface to 'figshare'
Papers that mentioned: 1

Very Likely Science (100)

cran: nimbleCarbon

Bayesian Analyses of Radiocarbon Dates with NIMBLE
Papers that mentioned: 1

Very Likely Science (85)

pypi: skfeature-chappers

Unofficial Fork of Feature Selection Repository in Python (DMML Lab@ASU)
Papers that mentioned: 1

Very Likely Science (65)

pypi: slayer

Slayer... the QA Automation Framework that came to SLAY!
Papers that mentioned: 1

Very Likely Science (65)

pypi: smartcare

Elderly wandering prediction AI
Papers that mentioned: 1

Very Likely Science (65)

cran: PHeval

Evaluation of the Proportional Hazards Assumption with a Standardized Score Process
Papers that mentioned: 1

Very Likely Science (75)

pypi: dame

Manage your dataflows seamlessly
Papers that mentioned: 1

Very Likely Science (65)

pypi: FastSent

FastSent is one of the solution for Sentiment classification using Recurrent Neural Networks(GRU)
Papers that mentioned: 1

Very Likely Science (75)

pypi: DAPN

this is a test package for finding All prime_number under input.
Papers that mentioned: 1

Very Likely Science (65)

pypi: dask-ml

A library for distributed and parallel machine learning
Papers that mentioned: 1

Very Likely Science (100)

cran: NIRStat

Novel Statistical Methods for Studying Near-Infrared Spectroscopy (NIRS) Time Series Data
Papers that mentioned: 1

Very Likely Science (85)

cran: nimbleSCR

Spatial Capture-Recapture (SCR) Methods Using 'nimble'
Papers that mentioned: 1

Very Likely Science (75)

pypi: curv

Papers that mentioned: 1

Unlikely Science (0)

cran: emplik

Empirical Likelihood Ratio for Censored/Truncated Data
Papers that mentioned: 1

Very Likely Science (75)

pypi: Beetroot

A General Purpose Utility package for Python 3
Papers that mentioned: 1

Likely Science (40)

pypi: bamp

Bamp version according to semantic versioning
Papers that mentioned: 1

Very Likely Science (65)

pypi: zipath

Papers that mentioned: 1

Very Likely Science (65)

pypi: earthpy

A set of helper functions to make working with spatial data in open source tools easier. This package is maintained by Earth Lab and was originally designed to support the earth analytics education program.
Papers that mentioned: 1

Very Likely Science (100)

pypi: csh

A collection of utilities for interacting with CSH services.
Papers that mentioned: 1

Very Likely Science (65)

pypi: scikit-surgerycore

scikit-surgerycore contains commonly used Image Guided Surgery algorithms and tools
Papers that mentioned: 1

Very Likely Science (100)

pypi: SPLICE-q

SPLICE-q is a fast and user-friendly Python tool for genome-wide SPLICing Efficiency quantification
Papers that mentioned: 1

Very Likely Science (65)

pypi: staccato

Twitter API wrapper for python 3
Papers that mentioned: 1

Likely Science (40)

cran: subscore

Computing Subscores in Classical Test Theory and Item Response Theory
Papers that mentioned: 1

Very Likely Science (83)

cran: SubVis

Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices
Papers that mentioned: 1

Very Likely Science (83)

cran: supcluster

Supervised Cluster Analysis
Papers that mentioned: 1

Very Likely Science (93)

pypi: lulz

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

cran: elrm

Exact Logistic Regression via MCMC
Papers that mentioned: 1

Very Likely Science (85)

pypi: mgl

Papers that mentioned: 1

Very Likely Science (65)

pypi: lists

some functions for list
Papers that mentioned: 1

Very Likely Science (65)

pypi: balanced

Payments platform for marketplaces
Papers that mentioned: 1

Likely Science (40)

pypi: threads

UNKNOWN
Papers that mentioned: 1

Likely Science (40)

cran: RFOC

Graphics for Spherical Distributions and Earthquake Focal Mechanisms
Papers that mentioned: 1

Very Likely Science (93)

pypi: jex

JSON/YAML interactive explorer - no JQ
Papers that mentioned: 1

Very Likely Science (65)

pypi: mints

Clean and elegant CLI development kit
Papers that mentioned: 1

Very Likely Science (75)

pypi: manipulation

MIT 6.421 - Robotic Manipulation
Papers that mentioned: 1

Very Likely Science (65)

pypi: cividis

Register `cividis` with matplotlib, a color map optimized for color vision deficiency, as published in Nuñez, et al. (2018), PLoS ONE 13(7): e0199239 .
Papers that mentioned: 1

Very Likely Science (65)