pypi: EpiTator
Annotators for extracting epidemiological information from text.
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pypi: Darbe
RDS MySQL replication setup tool
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bioconductor: miQC
Flexible, probabilistic metrics for quality control of scRNA-seq data
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bioconductor: seqPattern
Visualising oligonucleotide patterns and motif occurrences across a set of sorted sequences
Papers that mentioned: 1
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pypi: dap
DAP (Data Access Protocol) client and server for Python.
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pypi: DataExtraction
this is a test package.
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pypi: DanTDM
It's just a name snipe.
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pypi: DataLine
Simple class to aid the process of data cleaning.
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cran: JWileymisc
Miscellaneous Utilities and Functions
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pypi: GraphHierarchy
A module calculating quantities related to a network metric known as trophic coherence but now generalised to all networks, see Moutsinas, G., Shuaib, C., Guo, W., & Jarvis, S. (2019). Graph hierarchy and spread of infections. arXiv preprint arXiv:1908.04358 for more details.
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pypi: data-loader
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pypi: mta
Multi-Touch Attribution
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cran: kcirt
k-Cube Thurstonian IRT Models
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cran: TNC
Temporal Network Centrality (TNC) Measures
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bioconductor: plethy
R framework for exploration and analysis of respirometry data
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pypi: dan
Data analyzer.
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bioconductor: MouseFM
In-silico methods for genetic finemapping in inbred mice
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cran: hht
The Hilbert-Huang Transform: Tools and Methods
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pypi: graphs
A library for graph-based machine learning.
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pypi: oc
OpenShift CLI (oc) thin wrapper library for Python3
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pypi: eulerangles
Simplify the handling of large sets of Euler angles in Python
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pypi: datasketch
Probabilistic data structures for processing and searching very large datasets
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pypi: dal
a python database abstraction layer.
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cran: kselection
Selection of K in K-Means Clustering
Papers that mentioned: 1
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pypi: datavis
Visualization tools for Scientific Data analysis (e.g Images and Tables)
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cran: grapes
Make Binary Operators
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pypi: mtable
format data to reStructedText and Markup Table
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pypi: iarm
An interpreter for the ARM instruction set and an accompanying Jupyter kernel
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pypi: grapheme
Unicode grapheme helpers
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cran: lassopv
Nonparametric P-Value Estimation for Predictors in Lasso
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bioconductor: LinkHD
LinkHD: a versatile framework to explore and integrate heterogeneous data
Papers that mentioned: 1
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cran: HeritSeq
Heritability of Gene Expression for Next-Generation Sequencing
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pypi: datawig
Imputation for tables with missing values
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bioconductor: optimalFlow
optimalFlow
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pypi: daily
Simple CLI tool to write on the #daily slack channel and its corresponding timesheet.
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pypi: scot
EEG/MEG Source Connectivity Toolbox
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cran: LCF
Linear Combination Fitting
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pypi: datawrapper
A light-weight python wrapper for the Datawrapper API
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cran: granovaGG
Graphical Analysis of Variance Using ggplot2
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cran: metaBMA
Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis
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pypi: mtest
Two-sample test based on model selection and with better performance than the t-test on small sample sizes.
Papers that mentioned: 1
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cran: igraphdata
A Collection of Network Data Sets for the 'igraph' Package
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cran: HCD
Hierarchical Community Detection by Recursive Partitioning
Papers that mentioned: 1
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cran: lm.br
Linear Model with Breakpoint
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pypi: OCBO
Offline Contextual Bayesian Optimization
Papers that mentioned: 1
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pypi: iAST
A library for defining and manipulating ASTs
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bioconductor: QuaternaryProd
Computes the Quaternary Dot Product Scoring Statistic for Signed and Unsigned Causal Graphs
Papers that mentioned: 1
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bioconductor: restfulSE
Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface
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pypi: db3
Python 3 client for SSDB
Papers that mentioned: 1
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bioconductor: Rtpca
Thermal proximity co-aggregation with R
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pypi: grappa
Behavior-oriented, expressive, developer-friendly assertions library
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cran: SMME
Soft Maximin Estimation for Large Scale Heterogeneous Data
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cran: progress
Terminal Progress Bars
Papers that mentioned: 1
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bioconductor: scDataviz
scDataviz: single cell dataviz and downstream analyses
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pypi: dbd
dbd is a data loading and transformation tool that enables data analysts and engineers to load and transform data in SQL databases.
Papers that mentioned: 1
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bioconductor: HPAStainR
Queries the Human Protein Atlas Staining Data for Multiple Proteins and Genes
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pypi: mtg
Console-based access to the Gatherer Magic Card Database.
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pypi: grass
Annotation of de novo assemblies using semi-supervised learning on graphs
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bioconductor: sevenC
Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs
Papers that mentioned: 1
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pypi: d3plot
A D3.js frontend executable using JSON/YAML file as user input
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pypi: dbest
Model-based Approximate Query Processing (AQP) engine.
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pypi: GraTeLPy
Graph theoretic linear stability analysis
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bioconductor: StarBioTrek
StarBioTrek
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pypi: dbp
Simple program to manage gbp-docker container lifecycle.
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cran: LocFDRPois
Functions for Performing Local FDR Estimation when Null and Alternative are Poisson
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cran: loop
loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecology
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pypi: GraviPy
Tensor Calculus Package for General Relativity
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pypi: MTGA
python-mtga: a python-accessible interface for MTGA cards
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pypi: d2
CLI to get API JSON data and show as table
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cran: MAAPER
Analysis of Alternative Polyadenylation Using 3' End-Linked Reads
Papers that mentioned: 1
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cran: MAGNAMWAR
A Pipeline for Meta-Genome Wide Association
Papers that mentioned: 1
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cran: manipulate
Interactive Plots for RStudio
Papers that mentioned: 1
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cran: maptpx
MAP Estimation of Topic Models
Papers that mentioned: 1
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bioconductor: GNET2
Constructing gene regulatory networks from expression data through functional module inference
Papers that mentioned: 1
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pypi: DBWrapper
Thread-safe wrapper for Python sqlite3 bindings.
Papers that mentioned: 1
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cran: matchmaker
Flexible Dictionary-Based Cleaning
Papers that mentioned: 1
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cran: gnomonicM
Estimate Natural Mortality for Different Life Stages
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cran: mcca
Multi-Category Classification Accuracy
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pypi: dcat
Data Cataloging Service
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cran: GMCM
Fast Estimation of Gaussian Mixture Copula Models
Papers that mentioned: 1
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pypi: cytoflow
Python tools for quantitative, reproducible flow cytometry analysis
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pypi: grapes
Helper for dataflow based programming
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pypi: cyto
SBT Instruments' framework for Python-based applications
Papers that mentioned: 1
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cran: mdscore
Improved Score Tests for Generalized Linear Models
Papers that mentioned: 1
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cran: PPMR
Probabilistic Two Sample Mendelian Randomization
Papers that mentioned: 1
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cran: touch
Tools of Utilization and Cost in Healthcare
Papers that mentioned: 1
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pypi: dcm2bids
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
Papers that mentioned: 1
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pypi: graper
A Spider FrameWork
Papers that mentioned: 1
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pypi: dcmrtstruct2nii
Convert DICOM RT-Struct to nii
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pypi: oly
Oly Cli
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pypi: 2to3
Adds the 2to3 command directly to entry_points.
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pypi: 256
Papers that mentioned: 1
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pypi: Cyrus
Papers that mentioned: 1
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pypi: ddb
A serviceless sql interface for flat files written in cython
Papers that mentioned: 1
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pypi: abacus
Helper Library for Tornado Web Framework
Papers that mentioned: 1
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pypi: scorecardpy
Credit Risk Scorecard
Papers that mentioned: 1
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pypi: ddpg
Tensorflow implimentation of the DDPG algorithm
Papers that mentioned: 1
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pypi: acf
Lightweight recommender engine
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pypi: acquire
A tool to quickly gather forensic artifacts from disk images or a live system into a lightweight container
Papers that mentioned: 1
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pypi: Cylon
XMPP bot
Papers that mentioned: 1
Very Likely Science (65)