Packages with Software Mentions in Scientific Papers

The integration of single-cell RNA-sequencing datasets from multiple sources is critical for deciphering cell-cell heterogeneities and interactions in complex biological systems. We present a novel unsupervised batch removal framework, called iMAP, based on two state-of-art deep generative models – autoencoders and generative adversarial networks.
Papers that mentioned: 1

Very Likely Science (90)

pypi: mz

Package-based Mass Spectrometry/Proteomics Toolkit
Papers that mentioned: 1

Very Likely Science (75)

pypi: dpy

A tool that automatically generates quality documentation for Python projects.
Papers that mentioned: 1

Very Likely Science (65)

pypi: sealed

An example
Papers that mentioned: 1

Very Likely Science (65)

pypi: interact

Immediately start an interactive session
Papers that mentioned: 1

Very Likely Science (65)

pypi: JaqalPaq

Python tools for Jaqal
Papers that mentioned: 1

Very Likely Science (80)

pypi: kpdf

Papers that mentioned: 1

Very Likely Science (65)

pypi: lara

Lara - A web framework in python (you can create your own ;))
Papers that mentioned: 1

Very Likely Science (65)

pypi: launch

Launch: An Application Launcher
Papers that mentioned: 1

Very Likely Science (65)

pypi: SeCo

Python data serialization and compression made easy.
Papers that mentioned: 1

Very Likely Science (100)

pypi: loganalyzer

Collect and analyze log from multiples sources
Papers that mentioned: 1

Very Likely Science (65)

pypi: Logentries

Python Logger plugin to send logs to Logentries
Papers that mentioned: 1

Very Likely Science (65)

pypi: hextof-processor

Hextof Offline Analyzer
Papers that mentioned: 1

Very Likely Science (96)

cran: tensorBF

Bayesian Tensor Factorization
Papers that mentioned: 1

Very Likely Science (85)

pypi: Mars24

Mars24 wrapper to use marstime
Papers that mentioned: 1

Very Likely Science (65)

pypi: dtools

Wrapper object around relativedelta to manage date and datetime strings
Papers that mentioned: 1

Very Likely Science (65)

cran: trimmer

Trim an Object
Papers that mentioned: 1

Very Likely Science (75)

pypi: mcm

Map, Clean, Merge. For mapping data from one schema to another.
Papers that mentioned: 1

Very Likely Science (65)

cran: TripleR

Social Relation Model (SRM) Analyses for Single or Multiple Groups
Papers that mentioned: 1

Very Likely Science (75)

pypi: duckduckgo

Library for querying the Duck Duck Go API
Papers that mentioned: 1

Very Likely Science (65)

cran: varclust

Variables Clustering
Papers that mentioned: 1

Very Likely Science (75)

pypi: durian

Webhooks for Django **EXPERIMENTAL**
Papers that mentioned: 1

Very Likely Science (75)

pypi: selforgmap

self organizing maps
Papers that mentioned: 1

Very Likely Science (65)

cran: wordnet

WordNet Interface
Papers that mentioned: 1

Very Likely Science (75)

cran: WRSS

Water Resources System Simulator
Papers that mentioned: 1

Very Likely Science (75)

pypi: pdfkit

Wkhtmltopdf python wrapper to convert html to pdf using the webkit rendering engine and qt
Papers that mentioned: 1

Very Likely Science (65)

pypi: proMAD

Semiquantitative densitometric measurement of protein microarrays
Papers that mentioned: 1

Very Likely Science (90)

pypi: pymunk

Pymunk is a easy-to-use pythonic 2d physics library
Papers that mentioned: 1

Very Likely Science (90)

pypi: pymzml

high-throughput mzML parsing
Papers that mentioned: 1

Likely Science (55)

pypi: pyxform

A Python package to create XForms for ODK Collect.
Papers that mentioned: 1

Very Likely Science (65)

pypi: qam

QAM is a simple RPC Framework which uses the AMQP Protocol as Transport Protocol.
Papers that mentioned: 1

Very Likely Science (65)

pypi: seplot

A front-end for Python PyX
Papers that mentioned: 1

Very Likely Science (85)

pypi: Renamer

rename files according to a ruleset
Papers that mentioned: 1

Very Likely Science (65)

pypi: Rotater

Lakshay
Papers that mentioned: 1

Very Likely Science (65)

pypi: sfs

Sound Field Synthesis Toolbox
Papers that mentioned: 1

Very Likely Science (80)

pypi: shub

Scrapinghub Command Line Client
Papers that mentioned: 1

Very Likely Science (65)

pypi: Soho

A static web site generator
Papers that mentioned: 1

Very Likely Science (65)

pypi: spyke

A skype connection manager.
Papers that mentioned: 1

Very Likely Science (65)

pypi: tor

A Simple, Lightweight and Easy To Use, TOR Proxy Client Library For Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: vins

Voice INterfaces Service CLI
Papers that mentioned: 1

Very Likely Science (65)

pypi: Yuan

description
Papers that mentioned: 1

Very Likely Science (65)

cran: probemod

Statistical Tools for Probing Moderation Effects
Papers that mentioned: 1

Very Likely Science (85)

pypi: JNJ

Package providing a Jinja2-based template framework.
Papers that mentioned: 1

Very Likely Science (65)

pypi: esl

eva shell language for eva-shell
Papers that mentioned: 1

Very Likely Science (65)

pypi: EvoMSA

Sentiment Analysis System based on B4MSA and EvoDAG
Papers that mentioned: 1

Very Likely Science (90)

pypi: evtx

Python bindings for https://github.com/omerbenamram/evtx
Papers that mentioned: 1

Very Likely Science (65)

cran: proteomics

Statistical Analysis of High Throughput Proteomics Data
Papers that mentioned: 1

Very Likely Science (60)

pypi: ewstools

Python package to compute early warning signals (EWS)
Papers that mentioned: 1

Very Likely Science (100)

pypi: nasp

Northern Arizona SNP Pipeline
Papers that mentioned: 1

Very Likely Science (100)

pypi: stb

Security Tool Builder (STB): Tool for creating hacking tools
Papers that mentioned: 1

Very Likely Science (65)

cran: readtext

Import and Handling for Plain and Formatted Text Files
Papers that mentioned: 1

Very Likely Science (100)

cran: QHOT

QTL Hotspot Detection
Papers that mentioned: 1

Very Likely Science (75)

pypi: KVS

Python key-value store manager.
Papers that mentioned: 1

Very Likely Science (100)

cran: qlcMatrix

Utility Sparse Matrix Functions for Quantitative Language Comparison
Papers that mentioned: 1

Likely Science (50)

pypi: kyp

A simple printer of nested lists
Papers that mentioned: 1

Very Likely Science (65)

cran: sasLM

'SAS' Linear Model
Papers that mentioned: 1

Very Likely Science (75)

cran: quanteda.textmodels

Scaling Models and Classifiers for Textual Data
Papers that mentioned: 1

Very Likely Science (100)

cran: sate

Scientific Analysis of Trial Errors (SATE)
Papers that mentioned: 1

Very Likely Science (93)

cran: QuantNorm

Mitigating the Adverse Impact of Batch Effects in Sample Pattern Detection
Papers that mentioned: 1

Very Likely Science (100)

cran: satellite

Handling and Manipulating Remote Sensing Data
Papers that mentioned: 1

Very Likely Science (75)

cran: qvcalc

Quasi Variances for Factor Effects in Statistical Models
Papers that mentioned: 1

Very Likely Science (100)

cran: scatterD3

D3 JavaScript Scatterplot from R
Papers that mentioned: 1

Likely Science (58)

pypi: fa2

The fastest ForceAtlas2 algorithm for Python (and NetworkX)
Papers that mentioned: 1

Very Likely Science (90)

cran: scLink

Inferring Functional Gene Co-Expression Networks from Single Cell Data
Papers that mentioned: 1

Very Likely Science (93)

cran: rblt

Bio-Logging Toolbox
Papers that mentioned: 1

Very Likely Science (99)

pypi: ipecac

Generate Swagger/OAS 3.0 documentation from Python comments
Papers that mentioned: 1

Very Likely Science (65)

cran: sdafilter

Symmetrized Data Aggregation
Papers that mentioned: 1

Very Likely Science (75)

cran: registry

Infrastructure for R Package Registries
Papers that mentioned: 1

Very Likely Science (75)

pypi: stdlib

An alternate standard library for Python 2.7.
Papers that mentioned: 1

Very Likely Science (65)

cran: sensR

Thurstonian Models for Sensory Discrimination
Papers that mentioned: 1

Very Likely Science (75)

cran: simplePHENOTYPES

Simulation of Pleiotropic, Linked and Epistatic Phenotypes
Papers that mentioned: 1

Very Likely Science (100)

pypi: httplib2

A comprehensive HTTP client library.
Papers that mentioned: 1

Very Likely Science (65)

pypi: hu

Helpful utility software for open source programmers
Papers that mentioned: 1

Likely Science (40)

pypi: hues

Colored terminal text made easy for Python and happiness.
Papers that mentioned: 1

Very Likely Science (65)

pypi: nd

A Python library for n-dimensional Earth observation data processing
Papers that mentioned: 1

Very Likely Science (100)

cran: simcross

Simulate Experimental Crosses
Papers that mentioned: 1

Very Likely Science (100)

pypi: ndlib

Network Diffusion Library
Papers that mentioned: 1

Very Likely Science (100)

pypi: neoepiscope

comprehensive neoepitope prediction software
Papers that mentioned: 1

Very Likely Science (100)

pypi: neon

colorful cui utility
Papers that mentioned: 1

Likely Science (40)

pypi: nescience

Machine Learning with the Minimum Nescience Principle
Papers that mentioned: 1

Very Likely Science (75)

pypi: netplot

Ultralight 3D renderer of neural network architecture for TF/Keras Models
Papers that mentioned: 1

Very Likely Science (95)

pypi: informer

debug tool
Papers that mentioned: 1

Very Likely Science (85)

pypi: SequenceAligner

FASTA sequence aligner - test
Papers that mentioned: 1

Very Likely Science (65)

cran: SoundShape

Sound Waves Onto Morphometric Data
Papers that mentioned: 1

Very Likely Science (100)

pypi: netzwerk

Peer to peer decentralised networking package
Papers that mentioned: 1

Very Likely Science (75)

pypi: importlib

Backport of importlib.import_module() from Python 2.7
Papers that mentioned: 1

Very Likely Science (65)

pypi: Seraph

A static blog generator, with jinja2 template and Markdown support.
Papers that mentioned: 1

Likely Science (40)

pypi: indexer

a RDBMS full text index library for python
Papers that mentioned: 1

Very Likely Science (65)

pypi: Neuroharmony

A tool to perform Freesurfer volume Harminization in unseen scanner.
Papers that mentioned: 1

Very Likely Science (100)