Packages with Software Mentions in Scientific Papers

Predictive imputation of missing values with sklearn interface. This is a simple implementation of the idea presented in the MissForest R package.
Papers that mentioned: 1

Very Likely Science (65)

pypi: ppmd

A tool to convert from PowerPoint OOXML files to Markdown Presentations
Papers that mentioned: 1

Likely Science (40)

pypi: ppmc

Calculate Pearson Product Moment Correlation between two (or more) vectors.
Papers that mentioned: 1

Very Likely Science (90)

pypi: PyAuth

Google Authenticator (TOTP) desktop client
Papers that mentioned: 1

Very Likely Science (65)

pypi: presto

A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pretext

A package to author, build, and deploy PreTeXt projects.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pplot

This module can be used to create high-quality, presentation-ready X-Y graphs quickly and easily.
Papers that mentioned: 1

Very Likely Science (65)

pypi: tsclust

Streaming Time-series Clustering
Papers that mentioned: 1

Very Likely Science (85)

cran: stplanr

Sustainable Transport Planning
Papers that mentioned: 1

Very Likely Science (100)

pypi: primed

The Primed Toolkit
Papers that mentioned: 1

Very Likely Science (100)

pypi: sniff

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: pow

Command line text snippets, inspired by Zach Holman's **boom**.
Papers that mentioned: 1

Very Likely Science (65)

pypi: povme

POVME (Pocket VOlume MEasurer) is a Python package for extracting actionable information from ensembles of protein structures for use in drug design.
Papers that mentioned: 1

Very Likely Science (100)

pypi: snfpy

A Python toolbox for performing similarity network fusion (SNF)
Papers that mentioned: 1

Very Likely Science (100)

pypi: tspex

A Python package for calculating tissue-specificity metrics for gene expression.
Papers that mentioned: 1

Very Likely Science (90)

pypi: snp-caller

Initial implementation of Rheos SNP caller
Papers that mentioned: 1

Very Likely Science (65)

pypi: snpflip

Report reverse and ambiguous strand SNPs.
Papers that mentioned: 1

Very Likely Science (80)

pypi: primers

Create PCR primers with optimal lengths, tms, gc%s and free energies
Papers that mentioned: 1

Very Likely Science (95)

pypi: prin

simplePrint
Papers that mentioned: 1

Very Likely Science (65)

pypi: prince

Factor analysis in Python: PCA, CA, MCA, MFA, FAMD, GPA
Papers that mentioned: 1

Very Likely Science (75)

pypi: positional

Library to enforce positional or key-word arguments (deprecated/unmaintained)
Papers that mentioned: 1

Very Likely Science (65)

pypi: poseidon

DigitalOcean API v2 with SSH integration
Papers that mentioned: 1

Very Likely Science (65)

pypi: prepro

Useful for Auto Pre-processing
Papers that mentioned: 1

Very Likely Science (65)

pypi: probability

Probability in Python 3
Papers that mentioned: 1

Very Likely Science (65)

pypi: proboscis

Extends Nose with certain TestNG like features.
Papers that mentioned: 1

Very Likely Science (65)

pypi: procedure

Simple way to use Interactor Pattern in python
Papers that mentioned: 1

Very Likely Science (85)

pypi: pour

A lightweight Flask app generator.
Papers that mentioned: 1

Very Likely Science (65)

pypi: prizm

Papers that mentioned: 1

Very Likely Science (65)

pypi: potentials

API database tools for accessing the NIST Interatomic Potentials Repository: explore and download interatomic potentials and computed properties.
Papers that mentioned: 1

Very Likely Science (100)

pypi: yorick

a project skeleton / template / boilerplate tool
Papers that mentioned: 1

Likely Science (40)

pypi: tsp

Making permafrost data effortless
Papers that mentioned: 1

Very Likely Science (100)

pypi: prm

pip repository manager
Papers that mentioned: 1

Very Likely Science (65)

pypi: procfs

Python API for the Linux /proc virtual filesystem
Papers that mentioned: 1

Very Likely Science (65)

pypi: snapshotter

Very easy incremental snapshot backups using rsync
Papers that mentioned: 1

Likely Science (40)

pypi: tss

Threshold Secret Sharing (Shamir's secret sharing scheme).
Papers that mentioned: 1

Likely Science (40)

pypi: procrustes

validation library
Papers that mentioned: 1

Very Likely Science (65)

pypi: Proxi

Python Library for Proximity Network Inference.
Papers that mentioned: 1

Very Likely Science (75)

pypi: turn

A shared-resource-locking queue system using python and redis.
Papers that mentioned: 1

Very Likely Science (65)

pypi: tssenrich

Calculate TSS enrichment for ATAC-seq data
Papers that mentioned: 1

Very Likely Science (100)

pypi: porter

Porter: Simple File Operations in Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: sho

Visualize python objects in the best way possible
Papers that mentioned: 1

Very Likely Science (65)

pypi: snapshot

Extract named tuples from classes with a simple descriptor
Papers that mentioned: 1

Likely Science (40)

pypi: poppler-utils

Precompiled command-line utilities (based on Poppler) for manipulating PDF files and converting them to other formats.
Papers that mentioned: 1

Very Likely Science (65)

pypi: popeye

popeye : voxel population receptive fields from fMRI data
Papers that mentioned: 1

Very Likely Science (100)

pypi: tst

TST Simple Test Runner
Papers that mentioned: 1

Very Likely Science (65)

pypi: progress

Easy to use progress bars
Papers that mentioned: 1

Very Likely Science (65)

pypi: popcorn

The Python implementation of Inverse
Papers that mentioned: 1

Very Likely Science (65)

pypi: SNAKES

SNAKES is the Net Algebra Kit for Editors and Simulators
Papers that mentioned: 1

Very Likely Science (80)

pypi: polymorphism

Ad hoc polymorphism for Python classes!
Papers that mentioned: 1

Very Likely Science (65)

pypi: prolog

Simple, robust features for expediting application logging configuration
Papers that mentioned: 1

Very Likely Science (65)

pypi: PolyMID

PolyMID is a software package for analyzing stable-isotope tracing data.
Papers that mentioned: 1

Very Likely Science (100)

pypi: snakefmt

The uncompromising Snakemake code formatter
Papers that mentioned: 1

Very Likely Science (95)

pypi: pycsa

Python implementation of coupled simulated annealing (CSA)
Papers that mentioned: 1

Very Likely Science (80)

pypi: polygraph

Python library for defining GraphQL schemas
Papers that mentioned: 1

Very Likely Science (65)

pypi: pronto

Python frontend to ontologies.
Papers that mentioned: 1

Very Likely Science (90)

pypi: polygon

A Complete Python Wrapper for Polygon.io APIs.
Papers that mentioned: 1

Very Likely Science (80)

pypi: Tasty

rich, general purpose tagging engine built as a REST service
Papers that mentioned: 1

Very Likely Science (65)

pypi: sobol

SOBOL quasi random number sequence generator
Papers that mentioned: 1

Very Likely Science (85)

pypi: snafu

Swiss Army Knife of Serverless Computing
Papers that mentioned: 1

Very Likely Science (100)

pypi: Propel

A package to deploy sites in virtualenv, run scripts, and deploy workers with supervisor
Papers that mentioned: 1

Very Likely Science (65)

pypi: polybench

Multivariate polynomial arithmetic benchmark tests.
Papers that mentioned: 1

Very Likely Science (100)

pypi: polo

Optimal Linear Ordering of Hierarchical Trees
Papers that mentioned: 1

Very Likely Science (65)

pypi: propnet

A knowledge graph for Materials Science. Not yet ready for public use.
Papers that mentioned: 1

Very Likely Science (100)

pypi: poll

Utilities for polling, retrying, and exception handling
Papers that mentioned: 1

Very Likely Science (65)

pypi: socrates

Socrates is a simple static site generator.
Papers that mentioned: 1

Very Likely Science (65)

cran: stminsights

A 'Shiny' Application for Inspecting Structural Topic Models
Papers that mentioned: 1

Very Likely Science (85)

pypi: polecat

Papers that mentioned: 1

Very Likely Science (65)

pypi: tsview

Plugin to `tshistory` which provides a `view` subcommand to visualize time series from a repository and a flask blueprint
Papers that mentioned: 1

Very Likely Science (80)

pypi: protaccel

Package to infer kinetics from scRNA-seq/feature barcoding data.
Papers that mentioned: 1

Very Likely Science (100)

pypi: pole

A micro framework for PyGtk, PDF, XML, Utilities and Brazilan NFe.
Papers that mentioned: 1

Very Likely Science (65)

pypi: proxima

Pythonic Makefile
Papers that mentioned: 1

Very Likely Science (65)

pypi: prt

PRT reference server-side implementation
Papers that mentioned: 1

Very Likely Science (65)

pypi: smv

A modular framework for creating applications in Apache Spark
Papers that mentioned: 1

Very Likely Science (100)

pypi: protcomp

Python package to reconstruct protein complexes from protein pairwise interactions.
Papers that mentioned: 1

Very Likely Science (65)

pypi: lmdb

Universal Python binding for the LMDB 'Lightning' Database
Papers that mentioned: 1

Very Likely Science (65)

pypi: pnq

Papers that mentioned: 1

Very Likely Science (80)

pypi: pnp

Pull 'n' Push
Papers that mentioned: 1

Very Likely Science (65)

pypi: proton

Proton Template Engine
Papers that mentioned: 1

Very Likely Science (65)

pypi: pnoise

Vectorized port of Processing noise() function
Papers that mentioned: 1

Very Likely Science (80)

pypi: protosearch

Software for enumerating crystal structure prototypes to by used for active learning exploration with DFT and machine learning.
Papers that mentioned: 1

Very Likely Science (90)