Packages with Software Mentions in Scientific Papers

pypi: catenae

Python library for easy development of scalable stream processing topologies.
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: methimpute

Imputation-guided re-construction of complete methylomes from WGBS data
Papers that mentioned: 1

Very Likely Science (90)

bioconductor: metavizr

R Interface to the metaviz web app for interactive metagenomics data analysis and visualization
Papers that mentioned: 1

Very Likely Science (100)

pypi: yall

Yet Another Lazy Loader for Python
Papers that mentioned: 1

Very Likely Science (65)

cran: ms.sev

Package for Calculation of ARMSS, Local MSSS and Global MSSS
Papers that mentioned: 1

Very Likely Science (75)

pypi: OIPA

A fork of https://github.com/zimmerman-zimmerman/OIPA used at Catalpa.
Papers that mentioned: 1

Very Likely Science (65)

pypi: GaitAnalysisToolKit

Various tools for gait analysis used at the Cleveland State University Human Motion and Control Lab.
Papers that mentioned: 1

Very Likely Science (100)

cran: mrfDepth

Depth Measures in Multivariate, Regression and Functional Settings
Papers that mentioned: 1

Very Likely Science (85)

pypi: coplot

A personal plotting library that commonly used in the research of cosmology and astrophysics.
Papers that mentioned: 1

Very Likely Science (75)

pypi: imagen

Generic Python library for 0D, 1D, and 2D pattern distributions.
Papers that mentioned: 1

Very Likely Science (100)

pypi: history

Papers that mentioned: 1

Unlikely Science (0)

pypi: ted

ted package
Papers that mentioned: 1

Very Likely Science (65)

pypi: tek

Papers that mentioned: 1

Very Likely Science (65)

pypi: testcode

A simple printer of nested lists
Papers that mentioned: 1

Very Likely Science (65)

pypi: metaspace

Create Python modules using class syntax.
Papers that mentioned: 1

Very Likely Science (65)

pypi: holidays

Generate and work with holidays in Python
Papers that mentioned: 1

Likely Science (40)

pypi: tensor2tensor

Tensor2Tensor
Papers that mentioned: 1

Very Likely Science (100)

cran: MRCE

Multivariate Regression with Covariance Estimation
Papers that mentioned: 1

Very Likely Science (93)

pypi: UP-Tree

This is a simple module which takes input of transactions and provides it's UP-Tree, HeaderTable, and transactions dictionary
Papers that mentioned: 1

Very Likely Science (65)

cran: mpt

Multinomial Processing Tree Models
Papers that mentioned: 1

Very Likely Science (75)

pypi: edt

Multi-Label Anisotropic Euclidean Distance Transform 3D
Papers that mentioned: 1

Very Likely Science (100)

cran: PostcodesioR

API Wrapper Around 'Postcodes.io'
Papers that mentioned: 1

Very Likely Science (75)

pypi: PartSeg

PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,
Papers that mentioned: 1

Very Likely Science (100)

pypi: textblob

Simple, Pythonic text processing. Sentiment analysis, part-of-speech tagging, noun phrase parsing, and more.
Papers that mentioned: 1

Very Likely Science (70)

pypi: cbase

Collective Knowledge DataBase
Papers that mentioned: 1

Very Likely Science (85)

pypi: Riffle

Filesystem browser for PySide.
Papers that mentioned: 1

Very Likely Science (65)

cran: MortCast

Estimation and Projection of Age-Specific Mortality Rates
Papers that mentioned: 1

Very Likely Science (83)

pypi: ae

Python accoustic emission tools
Papers that mentioned: 1

Very Likely Science (67)

cran: MonoInc

Monotonic Increasing
Papers that mentioned: 1

Very Likely Science (83)

pypi: ko

Papers that mentioned: 1

Very Likely Science (65)

pypi: package1

Papers that mentioned: 1

Unlikely Science (0)

CBGT contains code for implementing the CBGT network and drift-diffusion model (DDM) fits described in the manuscript Reward-driven changes in striatal pathway competition shape evidence evaluation in decision-making.
Papers that mentioned: 1

Very Likely Science (100)

cran: PredCRG

Computational Prediction of Proteins Encoded by Circadian Genes
Papers that mentioned: 1

Very Likely Science (85)

pypi: Cozy

用于判断回文第一个对外发布的模块，测试
Papers that mentioned: 1

Very Likely Science (65)

cran: mnreadR

MNREAD Parameters Estimation and Curve Plotting
Papers that mentioned: 1

Very Likely Science (98)

cran: MMAC

Data for Mathematical Modeling and Applied Calculus
Papers that mentioned: 1

Very Likely Science (98)

pypi: pandoc-xnos

Library code for the pandoc-xnos filter suite.
Papers that mentioned: 1

Very Likely Science (65)

pypi: htsint

API and database for high-throughput sequencing analyses.
Papers that mentioned: 1

Very Likely Science (65)

pypi: briekit

BRIE-kit: Preprocessing tool kit of BRIE in splicing analysis
Papers that mentioned: 1

Very Likely Science (75)

cran: mixsmsn

Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions
Papers that mentioned: 1

Very Likely Science (75)

pypi: amplify

Amplify SDK for Quantum Annealing and Ising Machines
Papers that mentioned: 1

Very Likely Science (80)

pypi: particlefever

Particle filtering Monte Carlo inference for dynamic models
Papers that mentioned: 1

Very Likely Science (80)

pypi: cbptools

Regional Connectivity-Based Parcellation tool for Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: pv

minimal wsgi framework
Papers that mentioned: 1

Very Likely Science (65)

pypi: Paste

Tools for using a Web Server Gateway Interface stack
Papers that mentioned: 1

Very Likely Science (100)

pypi: torchsummary

Model summary in PyTorch similar to `model.summary()` in Keras
Papers that mentioned: 1

Very Likely Science (100)

pypi: genomediff

GenomeDiff (*.gd) file reader
Papers that mentioned: 1

Very Likely Science (100)

pypi: Rider

Python Web Application Framework
Papers that mentioned: 1

Very Likely Science (65)

pypi: patman

A fast and thought free service client for python
Papers that mentioned: 1

Very Likely Science (65)

pypi: ccAF

Classify scRNA-seq profiling with highly resolved cell cycle phases.
Papers that mentioned: 1

Very Likely Science (100)

pypi: pca_module

PCA Module for Python (with SVD and NIPALS Support)
Papers that mentioned: 1

Very Likely Science (80)

pypi: pch

Extra hooks for pre-commit.
Papers that mentioned: 1

Very Likely Science (65)

pypi: cco

CKAN Cloud Kubernetes operator
Papers that mentioned: 1

Very Likely Science (80)

pypi: brian2modelfitting

Modelfitting Toolbox for the Brian 2 simulator
Papers that mentioned: 1

Very Likely Science (90)

pypi: uvicorn

The lightning-fast ASGI server.
Papers that mentioned: 1

Very Likely Science (100)

pypi: JAEN

JAEN
Papers that mentioned: 1

Very Likely Science (65)

pypi: ribosome

neovim plugin framework
Papers that mentioned: 1

Very Likely Science (65)

cran: TSdist

Distance Measures for Time Series Data
Papers that mentioned: 1

Very Likely Science (75)

cran: TSrepr

Time Series Representations
Papers that mentioned: 1

Very Likely Science (75)

pypi: Alp

Alp time tools
Papers that mentioned: 1

Very Likely Science (65)

cran: PanelMatch

Matching Methods for Causal Inference with Time-Series Cross-Sectional Data
Papers that mentioned: 1

Very Likely Science (100)

pypi: curc

Papers that mentioned: 1

Very Likely Science (65)

pypi: aiotg

Asynchronous Python API for building Telegram bots
Papers that mentioned: 1

Likely Science (40)

pypi: editdistance

Fast implementation of the edit distance(Levenshtein distance)
Papers that mentioned: 1

Very Likely Science (75)

pypi: rpvm

Restricted Python Virtual Machine
Papers that mentioned: 1

Very Likely Science (65)

pypi: aggregation

Papers that mentioned: 1

Very Likely Science (65)

pypi: brange

A range which automatically deals with either direction.
Papers that mentioned: 1

Very Likely Science (65)

pypi: mflow

Utility library for ZMQ data streaming
Papers that mentioned: 1

Likely Science (40)

pypi: vasprun

Utility/library to process vasprun.xml, possibly more.
Papers that mentioned: 1

Likely Science (55)

pypi: pesel

Papers that mentioned: 1

Very Likely Science (65)

pypi: aerpy

a python library for reading ".aedat" format for event-camera logs.
Papers that mentioned: 1

Likely Science (55)

pypi: exoplanet

Fast and scalable MCMC for all your exoplanet needs
Papers that mentioned: 1

Very Likely Science (80)

pypi: pySCATMECH

A Python interface to the SCATMECH library
Papers that mentioned: 1

Very Likely Science (80)

pypi: daq

Dataset Query
Papers that mentioned: 1

Very Likely Science (65)

pypi: rgs

A small package to display and manipulate random geometry structures like pairings, meanders, triangulations and tilings.
Papers that mentioned: 1

Very Likely Science (65)

pypi: immuneML

immuneML is a software platform for machine learning analysis of immune receptor repertoires.
Papers that mentioned: 1

Very Likely Science (100)

pypi: musk

A simulations package
Papers that mentioned: 1

Very Likely Science (75)

pypi: matchms

Python library for large-scale comparisons and processing of tandem mass spectral data
Papers that mentioned: 1

Very Likely Science (100)

pypi: PhaseNet

PhaseNet
Papers that mentioned: 1

Very Likely Science (80)

pypi: twin

Papers that mentioned: 1

Very Likely Science (65)

pypi: geocell

Location estimation using GSM Cells with Google Maps Geolocation API
Papers that mentioned: 1

Very Likely Science (65)

pypi: DataGrid

Tabular data rendering library
Papers that mentioned: 1

Very Likely Science (65)

cran: permutations

The Symmetric Group: Permutations of a Finite Set
Papers that mentioned: 1

Very Likely Science (100)

pypi: xmlrpclib

Stand-alone distribution of xmlrpclib.
Papers that mentioned: 1

Very Likely Science (65)

pypi: cdn-fmri

Implementations of Causal Dynamic Network Analysis of fMRI
Papers that mentioned: 1

Very Likely Science (100)

pypi: dataTXT

python interface for SpazioDati's dataTXT and DBpedia
Papers that mentioned: 1

Very Likely Science (65)

pypi: sim-reads

Generate simulated reads.
Papers that mentioned: 1

Very Likely Science (80)

pypi: gpiozero

A simple interface to GPIO devices with Raspberry Pi
Papers that mentioned: 1

Very Likely Science (85)

pypi: vaderSentiment

VADER Sentiment Analysis. VADER (Valence Aware Dictionary and sEntiment Reasoner) is a lexicon and rule-based sentiment analysis tool that is specifically attuned to sentiments expressed in social media, and works well on texts from other domains.
Papers that mentioned: 1

Very Likely Science (80)