Packages with Software Mentions in Scientific Papers

pypi: man

Project manager for pypi libraries
Papers that mentioned: 1

Very Likely Science (65)

pypi: trajectory

Trajectory data lossy compression format based on Google's Encoded Polyline Algorithm Format
Papers that mentioned: 1

Very Likely Science (90)

pypi: vela

A simple framework for Gemini servers inspired by Flask and Express.js.
Papers that mentioned: 1

Very Likely Science (65)

cran: STEPCAM

ABC-SMC Inference of STEPCAM
Papers that mentioned: 1

Very Likely Science (100)

pypi: transfer

Transfer learning for deep image classification
Papers that mentioned: 1

Very Likely Science (65)

pypi: transfat

Play audio files on your car stereo and maintain sanity
Papers that mentioned: 1

Very Likely Science (65)

pypi: transformers

State-of-the-art Machine Learning for JAX, PyTorch and TensorFlow
Papers that mentioned: 1

Very Likely Science (100)

pypi: Turbulence

Code for Turbulence Analyze
Papers that mentioned: 1

Very Likely Science (65)

cran: stemmatology

Stemmatological Analysis of Textual Traditions
Papers that mentioned: 1

Very Likely Science (100)

pypi: transmart

An python client for communicating with the transmart rest api.
Papers that mentioned: 1

Very Likely Science (100)

cran: statsr

Companion Software for the Coursera Statistics with R Specialization
Papers that mentioned: 1

Very Likely Science (100)

pypi: nnlo

Distributed Machine Learning tool for High Performance Computing
Papers that mentioned: 1

Very Likely Science (100)

pypi: nippy

Miscellenous utils
Papers that mentioned: 1

Very Likely Science (65)

cran: statsExpressions

Tidy Dataframes and Expressions with Statistical Details
Papers that mentioned: 1

Very Likely Science (100)

pypi: laspy

Native Python ASPRS LAS read/write library
Papers that mentioned: 1

Very Likely Science (100)

cran: stationaRy

Detailed Meteorological Data from Stations All Over the World
Papers that mentioned: 1

Very Likely Science (75)

treacle is an AGI (Asterisk Gateway Interface) script which handles public holidays and opening hours in different offices with different timezones and different public holidays.
Papers that mentioned: 1

Likely Science (40)

pypi: nmrquant

Quantify metabolites from 1D Proton NMR experiments
Papers that mentioned: 1

Very Likely Science (75)

cran: statgenGWAS

Genome Wide Association Studies
Papers that mentioned: 1

Very Likely Science (100)

pypi: treefit

The first software for quantitative trajectory inference
Papers that mentioned: 1

Very Likely Science (80)

pypi: treefrog

Organize the Slippi game files in your filesystem according to their attributes
Papers that mentioned: 1

Likely Science (40)

pypi: stella

For finding flares in TESS 2-min data with a CNN
Papers that mentioned: 1

Very Likely Science (100)

pypi: peakdet

A Python toolbox for the identification and processing of peaks and troughs in physiological data
Papers that mentioned: 1

Very Likely Science (100)

pypi: SHFS

Feature election group of classes calculate the importance of features based on the Shap library for the classification and regression problem Only works with randomforest models for efficiency or gradient boosting models. DFwrapper - remove multicollinearity and outliers
Papers that mentioned: 1

Very Likely Science (75)

pypi: NMRPyStar

a parser for the NMR-STAR data format
Papers that mentioned: 1

Very Likely Science (65)

pypi: ll

linked list data structure in cpython.
Papers that mentioned: 1

Very Likely Science (65)

pypi: Stego

<function readme at 0x100757f28>
Papers that mentioned: 1

Very Likely Science (65)

pypi: trident

Spectrum generator for astrophysical simulation data
Papers that mentioned: 1

Very Likely Science (90)

pypi: trig

Many trigonometric functions
Papers that mentioned: 1

Very Likely Science (65)

pypi: lixtools

software tools for data collection/processing at LiX
Papers that mentioned: 1

Very Likely Science (80)

pypi: venom

Venom is an upcoming RPC framework for Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: trimesh

Import, export, process, analyze and view triangular meshes.
Papers that mentioned: 1

Very Likely Science (100)

pypi: trimmer

MP3 song normalizer
Papers that mentioned: 1

Very Likely Science (65)

pypi: livescript

Call LiveScript from Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: ViewModel

Model and View support for bottle framework, currently supports MongoDB. The ViewModel provides a high level DB schema and interface to a database as well as an interface from the DB to views. Current version works with bottle framework and pymongo however a previous version supported SQLAlchemy and other frameworks could be supported.
Papers that mentioned: 1

Very Likely Science (65)

pypi: triqler

Triqler: TRansparent Identification-Quantification-Linked Error Rates
Papers that mentioned: 1

Very Likely Science (100)

cran: tidystats

Save Output of Statistical Tests
Papers that mentioned: 1

Very Likely Science (85)

pypi: venture

Rofi / Wofi based project selector
Papers that mentioned: 1

Very Likely Science (65)

pypi: veranda

veranda is a place for IO related classes and operations dealing with multi-dimensional vector and raster data.
Papers that mentioned: 1

Very Likely Science (100)

pypi: tropescraper

A TvTropes scrapper
Papers that mentioned: 1

Very Likely Science (75)

pypi: truffle

Code search, documentation aid, code visualizer
Papers that mentioned: 1

Very Likely Science (65)

cran: tidySEM

Tidy Structural Equation Modeling
Papers that mentioned: 1

Very Likely Science (100)

pypi: verif

A verification program for meteorological forecasts and observations
Papers that mentioned: 1

Very Likely Science (100)

pypi: listcompare

This module provides support to compare two lists that have same or different types of data in it.
Papers that mentioned: 1

Very Likely Science (85)

pypi: trx

tools for (T)ime (R)esolved (X)-ray techniques
Papers that mentioned: 1

Very Likely Science (65)

pypi: tsclust

Streaming Time-series Clustering
Papers that mentioned: 1

Very Likely Science (85)

pypi: liso

Python API for LInac Simulation and Optimization
Papers that mentioned: 1

Very Likely Science (90)

pypi: tspex

A Python package for calculating tissue-specificity metrics for gene expression.
Papers that mentioned: 1

Very Likely Science (90)

pypi: ppmd

A tool to convert from PowerPoint OOXML files to Markdown Presentations
Papers that mentioned: 1

Likely Science (40)

pypi: tsp

Making permafrost data effortless
Papers that mentioned: 1

Very Likely Science (100)

pypi: tss

Threshold Secret Sharing (Shamir's secret sharing scheme).
Papers that mentioned: 1

Likely Science (40)

pypi: ppmc

Calculate Pearson Product Moment Correlation between two (or more) vectors.
Papers that mentioned: 1

Very Likely Science (90)

pypi: turn

A shared-resource-locking queue system using python and redis.
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyAuth

Google Authenticator (TOTP) desktop client
Papers that mentioned: 1

Very Likely Science (65)

pypi: tssenrich

Calculate TSS enrichment for ATAC-seq data
Papers that mentioned: 1

Very Likely Science (100)

pypi: Lisk

Papers that mentioned: 1

Very Likely Science (65)

pypi: pplot

This module can be used to create high-quality, presentation-ready X-Y graphs quickly and easily.
Papers that mentioned: 1

Very Likely Science (65)

pypi: primed

The Primed Toolkit
Papers that mentioned: 1

Very Likely Science (100)

pypi: predictive_imputer

Predictive imputation of missing values with sklearn interface. This is a simple implementation of the idea presented in the MissForest R package.
Papers that mentioned: 1

Very Likely Science (65)

pypi: sniff

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: tst

TST Simple Test Runner
Papers that mentioned: 1

Very Likely Science (65)

pypi: preg

Python-customisable grep-like command-line searcher.
Papers that mentioned: 1

Very Likely Science (65)

pypi: snipit

snipit
Papers that mentioned: 1

Very Likely Science (85)

pypi: pow

Command line text snippets, inspired by Zach Holman's **boom**.
Papers that mentioned: 1

Very Likely Science (65)

pypi: preprocessor

Preprocessor for files.
Papers that mentioned: 1

Very Likely Science (65)

pypi: povme

POVME (Pocket VOlume MEasurer) is a Python package for extracting actionable information from ensembles of protein structures for use in drug design.
Papers that mentioned: 1

Very Likely Science (100)

pypi: shellac

+shellac+ is an extension of the standard python library 'cmd', which aims to offer an alternative approach to nesting commands.
Papers that mentioned: 1

Very Likely Science (100)

pypi: snfpy

A Python toolbox for performing similarity network fusion (SNF)
Papers that mentioned: 1

Very Likely Science (100)

pypi: positional

Library to enforce positional or key-word arguments (deprecated/unmaintained)
Papers that mentioned: 1

Very Likely Science (65)

pypi: poseidon

DigitalOcean API v2 with SSH integration
Papers that mentioned: 1

Very Likely Science (65)

pypi: prepro

Useful for Auto Pre-processing
Papers that mentioned: 1

Very Likely Science (65)

pypi: presto

A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pretext

A package to author, build, and deploy PreTeXt projects.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pour

A lightweight Flask app generator.
Papers that mentioned: 1

Very Likely Science (65)

pypi: tsview

Plugin to `tshistory` which provides a `view` subcommand to visualize time series from a repository and a flask blueprint
Papers that mentioned: 1

Very Likely Science (80)

pypi: linger

Message queue and pubsub service with HTTP API
Papers that mentioned: 1

Very Likely Science (80)

pypi: potentials

API database tools for accessing the NIST Interatomic Potentials Repository: explore and download interatomic potentials and computed properties.
Papers that mentioned: 1

Very Likely Science (100)

pypi: snapshotter

Very easy incremental snapshot backups using rsync
Papers that mentioned: 1

Likely Science (40)

pypi: porter

Porter: Simple File Operations in Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: snapshot

Extract named tuples from classes with a simple descriptor
Papers that mentioned: 1

Likely Science (40)

pypi: poppler-utils

Precompiled command-line utilities (based on Poppler) for manipulating PDF files and converting them to other formats.
Papers that mentioned: 1

Very Likely Science (65)

pypi: ttclust

TTclust : A molecular simulation clustering program
Papers that mentioned: 1

Very Likely Science (100)

pypi: snp-caller

Initial implementation of Rheos SNP caller
Papers that mentioned: 1

Very Likely Science (65)

pypi: snpflip

Report reverse and ambiguous strand SNPs.
Papers that mentioned: 1

Very Likely Science (80)

pypi: primers

Create PCR primers with optimal lengths, tms, gc%s and free energies
Papers that mentioned: 1

Very Likely Science (95)

pypi: prin

simplePrint
Papers that mentioned: 1

Very Likely Science (65)

pypi: prince

Factor analysis in Python: PCA, CA, MCA, MFA, FAMD, GPA
Papers that mentioned: 1

Very Likely Science (75)

pypi: popeye

popeye : voxel population receptive fields from fMRI data
Papers that mentioned: 1

Very Likely Science (100)

pypi: popcorn

The Python implementation of Inverse
Papers that mentioned: 1

Very Likely Science (65)

pypi: SNAKES

SNAKES is the Net Algebra Kit for Editors and Simulators
Papers that mentioned: 1

Very Likely Science (80)

pypi: probability

Probability in Python 3
Papers that mentioned: 1

Very Likely Science (65)

pypi: proboscis

Extends Nose with certain TestNG like features.
Papers that mentioned: 1

Very Likely Science (65)

pypi: procedure

Simple way to use Interactor Pattern in python
Papers that mentioned: 1

Very Likely Science (85)

pypi: polymorphism

Ad hoc polymorphism for Python classes!
Papers that mentioned: 1

Very Likely Science (65)

pypi: prizm

Papers that mentioned: 1

Very Likely Science (65)

pypi: PolyMID

PolyMID is a software package for analyzing stable-isotope tracing data.
Papers that mentioned: 1

Very Likely Science (100)

pypi: yorick

a project skeleton / template / boilerplate tool
Papers that mentioned: 1

Likely Science (40)

pypi: linfit

Linear regression with MCMC
Papers that mentioned: 1

Very Likely Science (100)

pypi: prm

pip repository manager
Papers that mentioned: 1

Very Likely Science (65)

pypi: procfs

Python API for the Linux /proc virtual filesystem
Papers that mentioned: 1

Very Likely Science (65)