Packages with Software Mentions in Scientific Papers

Vectools - A bioinformatics-focused command-line utility for linear algebra, table manipulation, machine leaning, networks/graphs, and more.
Papers that mentioned: 1

Likely Science (50)

pypi: pyngsi

NGSI Python framework intended to build a Fiware NGSI Agent
Papers that mentioned: 1

Very Likely Science (80)

pypi: pynnotator

A Python Annotation Framework for VCFs using multiple tools (Ex. VEP, SnpEff and SnpSift) and databases (Ex. 1000genomes, dbSNP and dbnfsp) .
Papers that mentioned: 1

Very Likely Science (100)

pypi: PyNLPIR

A Python wrapper around the NLPIR/ICTCLAS Chinese segmentation software.
Papers that mentioned: 1

Very Likely Science (85)

pypi: PyNomo

PyNomo - Python Nomograms
Papers that mentioned: 1

Very Likely Science (80)

pypi: PyNonpar

Nonparametric Test Statistics
Papers that mentioned: 1

Very Likely Science (90)

pypi: specification

Python implementaion of the `Specification` pattern
Papers that mentioned: 1

Very Likely Science (65)

pypi: pynrrd

Pure python module for reading and writing NRRD files.
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyo

Python module to build digital signal processing program.
Papers that mentioned: 1

Likely Science (55)

pypi: PyODE

Python wrapper for the Open Dynamics Engine
Papers that mentioned: 1

Very Likely Science (80)

pypi: ntplib

Python NTP library
Papers that mentioned: 1

Very Likely Science (80)

pypi: nteract

UNKNOWN
Papers that mentioned: 1

Very Likely Science (80)

pypi: pyparallel

Python Parallel Port Extension
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyows

OWS utilities
Papers that mentioned: 1

Very Likely Science (80)

pypi: pypes

An actor based programming framework
Papers that mentioned: 1

Very Likely Science (65)

pypi: spectrogram

Spectrogram (80MHz bandwidth) accelerator for LimeSDR
Papers that mentioned: 1

Very Likely Science (65)

pypi: pypez

simple pipelines in python
Papers that mentioned: 1

Very Likely Science (65)

pypi: spectroscopy

Spectroscopy of systems with explicit vibrational degrees of Freedom
Papers that mentioned: 1

Very Likely Science (85)

pypi: SpectroscPy

SpectroscPy: Python tools for spectroscopy.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pypofatu

programmatic access to pofatu-data
Papers that mentioned: 1

Very Likely Science (65)

pypi: pypoman

Python module for polyhedral geometry.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pypop

A python library to compose pop songs automatically.
Papers that mentioned: 1

Likely Science (40)

pypi: PyProcessMacro

A Python library for moderation, mediation and conditional process analysis. Based on Andrew F. Hayes Process Macro.
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyProCT

pyProCT is an open source cluster analysis software especially adapted for jobs related with structural proteomics
Papers that mentioned: 1

Very Likely Science (75)

pypi: pypylon

The python wrapper for the Basler pylon Camera Software Suite.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pyproteome

Package for managing proteomics data
Papers that mentioned: 1

Very Likely Science (100)

pypi: veh

virtualenv for hg
Papers that mentioned: 1

Very Likely Science (65)

cran: synlik

Synthetic Likelihood Methods for Intractable Likelihoods
Papers that mentioned: 1

Very Likely Science (75)

pypi: spgl1

SPGL1: A solver for large-scale sparse reconstruction.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pyramid-arima

Python's forecast::auto.arima equivalent
Papers that mentioned: 1

Very Likely Science (95)

pypi: PyRAS

Papers that mentioned: 1

Very Likely Science (80)

pypi: PyRat

Python ray tracing
Papers that mentioned: 1

Very Likely Science (90)

Pyreport makes notes out of a python script. It can run the script in a sandbox and capture its output. It allows for embedding RestructuredText or LaTeX comments in the code for literate programming and generates a report made of the literate comments, the code, pretty printed, and the output of the script (pyreport can capture pylab figures). This is useful for documentations, making tutorials, but also for sharing python-based calculations with colleagues.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pyret

Tools for the analysis of neural electrophysiology data
Papers that mentioned: 1

Very Likely Science (100)

cran: Taba

Taba Robust Correlations
Papers that mentioned: 1

Very Likely Science (93)

pypi: spi

Pure Python SPI Interface using spidev
Papers that mentioned: 1

Very Likely Science (65)

pypi: spicy

Because spellchecker. SciPy at your fingertips
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyRMSD

pyRMSD is a small Python package that aims to offer an integrative and efficient way of performing RMSD calculations of large sets of structures. It is specially tuned to do fast collective RMSD calculations, as pairwise RMSD matrices.
Papers that mentioned: 1

Very Likely Science (85)

pypi: PyRNA

View RNA secondary structure and BLAST search it for identification
Papers that mentioned: 1

Very Likely Science (80)

pypi: pyRserve

A Python client to remotely access the R statistic package via network
Papers that mentioned: 1

Very Likely Science (90)

pypi: pyrtlsdr

A Python wrapper for librtlsdr (a driver for Realtek RTL2832U based SDR's)
Papers that mentioned: 1

Very Likely Science (65)

pypi: spidev

Python bindings for Linux SPI access through spidev
Papers that mentioned: 1

Likely Science (40)

pypi: major

Python implementation of the major system.
Papers that mentioned: 1

Very Likely Science (65)

pypi: spikeextractors

Python module for extracting recorded and spike sorted extracellular data from different file types and formats
Papers that mentioned: 1

Very Likely Science (100)

pypi: pysat

'Supports science analysis across disparate data platforms'
Papers that mentioned: 1

Very Likely Science (100)

pypi: spikeinterface

Python toolkit for analysis, visualization, and comparison of spike sorting output
Papers that mentioned: 1

Very Likely Science (90)

pypi: PyscesToolbox

A set of metabolic model analysis tools for PySCeS.
Papers that mentioned: 1

Very Likely Science (100)

pypi: strf

string format locals
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyscf

PySCF: Python-based Simulations of Chemistry Framework
Papers that mentioned: 1

Very Likely Science (90)

pypi: pysha3

SHA-3 (Keccak) for Python 2.7 - 3.5
Papers that mentioned: 1

Very Likely Science (65)

pypi: PySimpleGUI

Python GUIs for Humans. Launched in 2018. It's 2022 & PySimpleGUI is an ACTIVE & supported project. Super-simple to create custom GUI's. 325+ Demo programs & Cookbook for rapid start. Extensive documentation. Main docs at www.PySimpleGUI.org. Fun & your success are the focus. Examples using Machine Learning (GUI, OpenCV Integration), Rainmeter Style Desktop Widgets, Matplotlib + Pyplot, PIL support, add GUI to command line scripts, PDF & Image Viewers. Great for beginners & advanced GUI programmers.
Papers that mentioned: 1

Very Likely Science (90)

pypi: spikely

Spike sorting made simple
Papers that mentioned: 1

Very Likely Science (100)

pypi: PyStanfordDependencies

Python interface for converting Penn Treebank trees to Universal Dependencies and Stanford Dependencies
Papers that mentioned: 1

Very Likely Science (90)

pypi: pytabix

Python interface for tabix
Papers that mentioned: 1

Very Likely Science (80)

pypi: pytc

Tokyo Cabinet Python bindings
Papers that mentioned: 1

Very Likely Science (65)

pypi: spikesorters

Python wrappers for popular spike sorters
Papers that mentioned: 1

Very Likely Science (100)

pypi: PythonCyc

A Python interface to Pathway Tools, 2019 update
Papers that mentioned: 1

Very Likely Science (100)

pypi: spiketoolkit

Python toolkit for analysis, visualization, and comparison of spike sorting output
Papers that mentioned: 1

Very Likely Science (95)

pypi: Pytheas

Framework for a fetch-and-send daemon.
Papers that mentioned: 1

Very Likely Science (65)

pypi: python-barcode

Create standard barcodes with Python. No external modules needed. (optional Pillow support included).
Papers that mentioned: 1

Very Likely Science (100)

pypi: python-graph

A library for working with graphs in Python
Papers that mentioned: 1

Very Likely Science (80)

pypi: pythongrid

High-level python wapper for the Sun Grid Engine (SGE) using DRMAA and ZMQ
Papers that mentioned: 1

Very Likely Science (65)

pypi: python-rocksdb

Python bindings for RocksDB
Papers that mentioned: 1

Very Likely Science (65)

cran: syt

Standard Young Tableaux
Papers that mentioned: 1

Very Likely Science (75)

pypi: python-pptx

Generate and manipulate Open XML PowerPoint (.pptx) files
Papers that mentioned: 1

Likely Science (40)

pypi: spikewidgets

Python widgets for spike sorting and electrophysiology
Papers that mentioned: 1

Very Likely Science (100)

pypi: python_speech_features

Python Speech Feature extraction
Papers that mentioned: 1

Very Likely Science (95)

pypi: spinach

Modern Redis task queue for Python 3
Papers that mentioned: 1

Very Likely Science (65)

pypi: pytplot

A python version of IDL tplot libraries
Papers that mentioned: 1

Very Likely Science (100)

pypi: Pytrack

face tracking software for use with the raspberry pi.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pytleap

Interface to connect to a TP-Link EAP.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pytl

Command line tool that parses python file, enumerates classes and methods as a tree structure.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pytoda

pytoda: PaccMann PyTorch Dataset Classes.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pytri

Pytri, redux
Papers that mentioned: 1

Very Likely Science (85)

pypi: pyts

A python package for time series classification
Papers that mentioned: 1

Very Likely Science (100)

pypi: pytsa

Simple, human-readable, fully tested, signature-preserving Python decorators to ensure your method abides to its contract.
Papers that mentioned: 1

Very Likely Science (65)

pypi: SpiNNakerGraphFrontEnd

Front end to the SpiNNaker tool chain which uses a basic graph
Papers that mentioned: 1

Very Likely Science (100)

pypi: PyTumblr

A Python Tumblr API v2 Client
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyTTE

Package to compute X-ray diffraction curves of bent crystals by numerically solving the 1D Takagi-Taupin equation.
Papers that mentioned: 1

Very Likely Science (85)

pypi: vegans

A library to easily train various existing GANs in PyTorch.
Papers that mentioned: 1

Very Likely Science (95)

pypi: pyvjoy

Python bindings for vJoy
Papers that mentioned: 1

Very Likely Science (65)

pypi: spitz

The reference python implementation of the SPITS programming model
Papers that mentioned: 1

Very Likely Science (100)

pypi: PyWavefront

Python library for importing Wavefront .obj files
Papers that mentioned: 1

Very Likely Science (100)

pypi: pywindow

My short description for my project.
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyX

Python package for the generation of PostScript, PDF, and SVG files
Papers that mentioned: 1

Very Likely Science (80)

pypi: spl

Spigot/Bukkit Plugin Manager
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyxmolpp2

Utils for processing MD
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyxMPI

Pyrex wrapper for MPI (Message Passing Interface) 1.1
Papers that mentioned: 1

Very Likely Science (65)

pypi: splicer

the world is a database now you can query it with SQL
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyzotero

Python wrapper for the Zotero API
Papers that mentioned: 1

Very Likely Science (100)

pypi: srd

Modele de simulation du revenu disponible Quebec
Papers that mentioned: 1

Very Likely Science (75)

pypi: mailchimp

Deprecated. Replaced by mailchimp-marketing - A CLI client and Python API library for the MailChimp email platform.
Papers that mentioned: 1

Likely Science (40)

pypi: q2-micom

QIIME 2 plugin for metabolic modeling of microbial communities.
Papers that mentioned: 1

Very Likely Science (100)