Packages with Software Mentions in Scientific Papers

pypi: gar

gar brings context-specific tests to nose
Papers that mentioned: 1

Very Likely Science (65)

pypi: galaxyxml

Galaxy XML generation library
Papers that mentioned: 1

Very Likely Science (65)

pypi: geck

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: dmipy

dmipy: diffusion microstructure imaging in python
Papers that mentioned: 1

Very Likely Science (90)

pypi: dmp

Repackaging of Google's Diff Match and Patch libraries. Offers robust algorithms to perform the operations required for synchronizing plain text.
Papers that mentioned: 1

Likely Science (50)

pypi: geemap

A Python package for interactive mapping using Google Earth Engine and ipyleaflet
Papers that mentioned: 1

Very Likely Science (100)

pypi: gencove

Gencove API and CLI tool
Papers that mentioned: 1

Very Likely Science (65)

cran: rocc

ROC Based Classification
Papers that mentioned: 1

Very Likely Science (75)

pypi: genomictools

Tools for processing genomic ranges
Papers that mentioned: 1

Very Likely Science (65)

pypi: dnachisel

Optimize DNA sequences under constraints.
Papers that mentioned: 1

Very Likely Science (86)

pypi: dnaio

Read and write FASTA and FASTQ files efficiently
Papers that mentioned: 1

Very Likely Science (90)

pypi: ops

The Python library behind great charms
Papers that mentioned: 1

Very Likely Science (65)

pypi: docere

Tools for publishing analyses as a static site
Papers that mentioned: 1

Very Likely Science (65)

cran: rts

Raster Time Series Analysis
Papers that mentioned: 1

Very Likely Science (85)

pypi: letters

A simple method to customize your programs to infinity!
Papers that mentioned: 1

Very Likely Science (65)

pypi: globetrotter

Approximate country and language name matching.
Papers that mentioned: 1

Very Likely Science (65)

pypi: gpio

gpio access via the standard linux sysfs interface
Papers that mentioned: 1

Very Likely Science (65)

pypi: GPU-BSM

A GPU-based Tool to Map Bisulfite-Threated Reads
Papers that mentioned: 1

Likely Science (55)

pypi: doctor

This module uses python 3 type hints to validate request and response data in Flask Python APIs and generate API documentation.
Papers that mentioned: 1

Very Likely Science (65)

pypi: synthesizer

A simple virtual analog synthesizer.
Papers that mentioned: 1

Very Likely Science (65)

pypi: Graphy

A simple chart library for Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: Kohlrabi

An asyncio-based task queue.
Papers that mentioned: 1

Very Likely Science (65)

pypi: group-lasso

Fast group lasso regularised linear models in a sklearn-style API.
Papers that mentioned: 1

Very Likely Science (75)

pypi: dog

dog is a simple wrapper for "docker run" to make it simple to call tools residing inside docker containers
Papers that mentioned: 1

Very Likely Science (65)

pypi: hbase

Hbase REST API client built using uplink
Papers that mentioned: 1

Very Likely Science (65)

pypi: gsmodutils

Utilities for the management and testing of genome scale models in a cross platform, open manner.
Papers that mentioned: 1

Very Likely Science (80)

pypi: domain

Python client for the Domain property API
Papers that mentioned: 1

Very Likely Science (65)

pypi: hd

Hexdump library and utility.
Papers that mentioned: 1

Likely Science (40)

pypi: healthcareai

Tools for healthcare machine learning
Papers that mentioned: 1

Very Likely Science (90)

pypi: domaincaller

A python implementation of original DI-based domain caller proposed by Dixon et al. (2012)
Papers that mentioned: 1

Very Likely Science (100)

pypi: donut

Makes symlinks to dotfiles.
Papers that mentioned: 1

Very Likely Science (75)

pypi: hnget

Shows and opens links on Hacker news from the terminal
Papers that mentioned: 1

Very Likely Science (65)

pypi: Hockey

Hockey Stats
Papers that mentioned: 1

Very Likely Science (65)

pypi: Houndify

Houndify libraries and SoundHound speex encoder
Papers that mentioned: 1

Very Likely Science (65)

cran: sams

Merge-Split Samplers for Conjugate Bayesian Nonparametric Models
Papers that mentioned: 1

Very Likely Science (93)

pypi: doodle

A library to segment objects in an image in a semi-automated fashion.
Papers that mentioned: 1

Very Likely Science (65)

pypi: sdmx

Read SDMX XML files
Papers that mentioned: 1

Very Likely Science (65)

cran: SDMPlay

Species Distribution Modelling Playground
Papers that mentioned: 1

Very Likely Science (85)

pypi: dota2

Module for interacting Dota2's Game Coordinator
Papers that mentioned: 1

Likely Science (40)

pypi: dotnet

Python Interoperability with the Microsoft .NET Framework
Papers that mentioned: 1

Likely Science (40)

cran: SkewHyperbolic

The Skew Hyperbolic Student t-Distribution
Papers that mentioned: 1

Very Likely Science (83)

pypi: sdt_metrics

Signal Detection Theory (SDT) metrics for Python
Papers that mentioned: 1

Very Likely Science (80)

cran: spatialnbda

Performs spatial NBDA in a Bayesian context
Papers that mentioned: 1

Very Likely Science (85)

pypi: naga

A powerful Haskell/Clojure-inspired Python-hybrid-monster!
Papers that mentioned: 1

Very Likely Science (65)

cran: spselect

Selecting Spatial Scale of Covariates in Regression Models
Papers that mentioned: 1

Very Likely Science (93)

cran: ssgraph

Bayesian Graph Structure Learning using Spike-and-Slab Priors
Papers that mentioned: 1

Very Likely Science (85)

pypi: hemi

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: seasonal

Estimate trend and seasonal effects in a timeseries
Papers that mentioned: 1

Very Likely Science (80)

pypi: jupyter-repo2docker

Repo2docker: Turn code repositories into Jupyter enabled Docker Images
Papers that mentioned: 1

Very Likely Science (100)

pypi: Lina

Text template library
Papers that mentioned: 1

Very Likely Science (65)

pypi: lightsheet

Papers that mentioned: 1

Unlikely Science (0)

pypi: DStream

An experimental Java-8-stream-like lib.
Papers that mentioned: 1

Very Likely Science (75)

pypi: ly

This is just a test module
Papers that mentioned: 1

Very Likely Science (65)

pypi: hgdb

Hardware generator debugger
Papers that mentioned: 1

Very Likely Science (100)

pypi: seglearn

A template for scikit-learn compatible packages.
Papers that mentioned: 1

Very Likely Science (100)

pypi: dts

Generate sequence of datatimes, like seq
Papers that mentioned: 1

Likely Science (40)

pypi: segtools

tools for exploratory analysis of genomic segmentations
Papers that mentioned: 1

Very Likely Science (90)

pypi: HiCAssembler

Hi-C guided genome assembly
Papers that mentioned: 1

Very Likely Science (100)

pypi: duiker

Automatically index your shell history in a full-text search database. Magic!
Papers that mentioned: 1

Very Likely Science (65)

pypi: durian

Webhooks for Django **EXPERIMENTAL**
Papers that mentioned: 1

Very Likely Science (75)

pypi: selfea

Papers that mentioned: 1

Very Likely Science (65)

pypi: openfermionpyscf

A plugin allowing OpenFermion to interface with PySCF.
Papers that mentioned: 1

Very Likely Science (65)

pypi: openopt

A python module for numerical optimization
Papers that mentioned: 1

Very Likely Science (90)

pypi: pirecorder

A python package for controlled and automated image and video recording with the raspberry pi
Papers that mentioned: 1

Very Likely Science (80)

pypi: proMAD

Semiquantitative densitometric measurement of protein microarrays
Papers that mentioned: 1

Very Likely Science (90)

pypi: pyModeS

Python Mode-S and ADS-B Decoder
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyxform

A Python package to create XForms for ODK Collect.
Papers that mentioned: 1

Very Likely Science (65)

pypi: qam

QAM is a simple RPC Framework which uses the AMQP Protocol as Transport Protocol.
Papers that mentioned: 1

Very Likely Science (65)

pypi: seplot

A front-end for Python PyX
Papers that mentioned: 1

Very Likely Science (85)

pypi: Renamer

rename files according to a ruleset
Papers that mentioned: 1

Very Likely Science (65)

pypi: ripser

A Lean Persistent Homology Library for Python
Papers that mentioned: 1

Very Likely Science (80)

pypi: ri

A remote import library
Papers that mentioned: 1

Very Likely Science (65)

pypi: rita

Python Web Application Framework
Papers that mentioned: 1

Very Likely Science (65)

pypi: rn

Easy multiple renaming command
Papers that mentioned: 1

Very Likely Science (65)

pypi: Selecting

Object-based abstraction over the system call select()
Papers that mentioned: 1

Very Likely Science (80)

pypi: snet

3D Scattering transform using periodic wavelet.
Papers that mentioned: 1

Very Likely Science (80)

pypi: snpcaller

Read bam file and find the snp positions
Papers that mentioned: 1

Very Likely Science (65)

pypi: snscrape

A social networking service scraper
Papers that mentioned: 1

Very Likely Science (75)

pypi: spyke

A skype connection manager.
Papers that mentioned: 1

Very Likely Science (65)

pypi: tor

A Simple, Lightweight and Easy To Use, TOR Proxy Client Library For Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: wellmap

File format for 96-well plate layouts.
Papers that mentioned: 1

Very Likely Science (65)

pypi: Whoosh

Fast, pure-Python full text indexing, search, and spell checking library.
Papers that mentioned: 1

Very Likely Science (65)

pypi: efficiency

A package for efficient programming
Papers that mentioned: 1

Very Likely Science (100)

pypi: hidraw

hidraw Linux module
Papers that mentioned: 1

Very Likely Science (65)

pypi: epitopepredict

Python package for epitope prediction
Papers that mentioned: 1

Very Likely Science (100)

pypi: his

Utree package
Papers that mentioned: 1

Very Likely Science (65)

pypi: icl

Interval Container Library
Papers that mentioned: 1

Very Likely Science (65)

pypi: synthia

Multidimensional synthetic data generation in Python
Papers that mentioned: 1

Very Likely Science (90)

cran: pspline.inference

Estimation of Characteristics of Seasonal and Sporadic Infectious Disease Outbreaks Using Generalized Additive Modeling with Penalized Basis Splines
Papers that mentioned: 1

Very Likely Science (100)

cran: pvsR

An R package to interact with the Project Vote Smart API for scientific research
Papers that mentioned: 1

Very Likely Science (85)

cran: quadrupen

Sparsity by Worst-Case Quadratic Penalties
Papers that mentioned: 1

Very Likely Science (75)

cran: sarima

Simulation and Prediction with Seasonal ARIMA Models
Papers that mentioned: 1

Very Likely Science (100)

cran: SARP.compo

Network-Based Interpretation of Changes in Compositional Data
Papers that mentioned: 1

Very Likely Science (60)

pypi: expipe

Experiment-data management platform
Papers that mentioned: 1

Very Likely Science (100)

pypi: explainer

The first unified explainability toolkit for explainable software and hardware systems.
Papers that mentioned: 1

Very Likely Science (80)

pypi: navi

A framework for quickly building better and open personal assistants
Papers that mentioned: 1

Likely Science (40)

pypi: navigation

Python library for learning a website and retrieving information from it
Papers that mentioned: 1

Likely Science (40)

cran: scatr

Create Scatter Plots with Marginal Density or Box Plots
Papers that mentioned: 1

Very Likely Science (75)

pypi: fa2

The fastest ForceAtlas2 algorithm for Python (and NetworkX)
Papers that mentioned: 1

Very Likely Science (90)

cran: scLink

Inferring Functional Gene Co-Expression Networks from Single Cell Data
Papers that mentioned: 1

Very Likely Science (93)