Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi projects 9,932

pypi: Bunny
Hop around the experiment space
Papers that mentioned: 1
pypi: bufio

Papers that mentioned: 1
pypi: bud
bud runs stuff for you
Papers that mentioned: 1
pypi: bubbles
Virtual Data Object framework for data processing (ETL) and quality monitoring
Papers that mentioned: 1
pypi: bubble
cli tool to bubble information from one to another service, with rule based transformations ">>>"
Papers that mentioned: 1
pypi: bss
BrainSuite statistics toolbox
Papers that mentioned: 1
pypi: bs4
Dummy package for Beautiful Soup
Papers that mentioned: 1
pypi: brt
Business research tools
Papers that mentioned: 1
pypi: Brill
The Brill API
Papers that mentioned: 1
pypi: brancher
A user-centered Python package for differentiable probabilistic inference
Papers that mentioned: 1
pypi: brama
API Gateway proxy server with plugins
Papers that mentioned: 1
pypi: brainglobe
Python-based tools for computational neuroanatomy.
Papers that mentioned: 1
pypi: Braid
Meta-framework for faster prototyping in Deep Learning
Papers that mentioned: 1
pypi: br
batch rename
Papers that mentioned: 1
pypi: bp-utils
A set of scripts for Bitbucket Pipelines
Papers that mentioned: 1
pypi: bpmn

Papers that mentioned: 1
pypi: bpg
template engine with expression
Papers that mentioned: 1
pypi: bpel

Papers that mentioned: 1
pypi: bower

Papers that mentioned: 1
pypi: Boutique
The command line tool for boutiqueforge.com. It contains a web server embedded that can emulate the BoutiqueForge environment. This allows you to develop and test on your local machine before pushing any changes to online. More information at https://boutiqueforge.com/docs/article/getting_started
Papers that mentioned: 1
pypi: botox
Boto3 Extended
Papers that mentioned: 1
pypi: booster
Boost your project
Papers that mentioned: 1
pypi: Bookmark
Web bookmark manager
Papers that mentioned: 1
pypi: Bluebook
Pylot is a Flask extension that adds structure and map your views and templates together for rapid application development
Papers that mentioned: 1
pypi: blow
Small script to dos evil hackers.
Papers that mentioned: 1
pypi: BloomFilter
A simple implement of bloom filter
Papers that mentioned: 1
pypi: blob
UNKNOWN
Papers that mentioned: 1
pypi: blind
Blind Client: The easiest ML tracking library
Papers that mentioned: 1
pypi: bits
UNKNOWN
Papers that mentioned: 1
pypi: biskit
A Python platform for structural bioinformatics
Papers that mentioned: 1
pypi: birdsuite
UNKNOWN
Papers that mentioned: 1
pypi: bioseq
Bioseq is a lightweight Python package for handling nucleotide, protein, and codon sequences.
Papers that mentioned: 1
pypi: BioMetAll

Papers that mentioned: 1
pypi: biomass
A Python Framework for Modeling and Analysis of Signaling Systems
Papers that mentioned: 1
pypi: BioDendro
a package to cluster metabolomics data and plot dendrograms
Papers that mentioned: 1
pypi: binpacker
Distribute weighted tasks equally to workers by solving Bin Packing problem. This package provides an abstraction for user to extend
Papers that mentioned: 1
pypi: biotool
Utilities such as binary search on the lines of a file
Papers that mentioned: 1
pypi: bilbo
Commands to help build and maintain a gollum wiki
Papers that mentioned: 1
pypi: BIF
有用的内置函数。
Papers that mentioned: 1
pypi: BIDSHandler
Simple way to manage and manipulate BIDS compatible data
Papers that mentioned: 1
pypi: BibReview
BibReview is a software for managing bibliographic database. It includes avanced functions for literature reviews.
Papers that mentioned: 1
pypi: bids
bids: a template for small scientific Python projects
Papers that mentioned: 1
pypi: bester
A simple sorter of oddly formatted data!
Papers that mentioned: 1
pypi: bertha
Python client library and console util for BerthaD
Papers that mentioned: 1
pypi: Benchmarker
small but awesome utility for benchmarking
Papers that mentioned: 1
pypi: bedshift
BED file perturbations
Papers that mentioned: 1
pypi: beautifulsoup4
Screen-scraping library
Papers that mentioned: 1
pypi: beatboxer
A beatboxer to create custom beats.
Papers that mentioned: 1
pypi: beat
'Bayesian Earthquake Analysis Tool'
Papers that mentioned: 1
pypi: beatbox
A Python library for querying/updating Saleforce.com data via SOAP API
Papers that mentioned: 1
pypi: Bcfg2
Bcfg2 Server
Papers that mentioned: 1
pypi: bcca
Helpers from Base Camp Coding Academy
Papers that mentioned: 1
pypi: bbrc-validator
Systematic sanity checks on imaging datasets within an XNAT environment
Papers that mentioned: 1
pypi: bbcflib
Utility modules for deploying workflows in the BBCF
Papers that mentioned: 1
pypi: bbb
Buildbot <-> Taskcluster Bridge
Papers that mentioned: 1
pypi: BayesDB
A Bayesian database table for querying the probable implications of data as easily as SQL databases query the data itself.
Papers that mentioned: 1
pypi: Batcher
Cut sliceable objects into batches, eg for paging display on a website
Papers that mentioned: 1
pypi: Basket
A local static PyPI repository builder
Papers that mentioned: 1
pypi: base-package
python package template.
Papers that mentioned: 1
pypi: banjo
Not a placeholder for an internal library
Papers that mentioned: 1
pypi: bamp
Bamp version according to semantic versioning
Papers that mentioned: 1
pypi: bamboo
A stream routing service
Papers that mentioned: 1
pypi: bam2fasta
tool for converting a bam file to fastas
Papers that mentioned: 1
pypi: balloon
Set of cloud computing automation utilities
Papers that mentioned: 1
pypi: balena
A Balena client.
Papers that mentioned: 1
pypi: bamsnap
A converter from .bam to .png for specific genomic region.
Papers that mentioned: 1
pypi: balanced
Payments platform for marketplaces
Papers that mentioned: 1
pypi: bal
A framework for analyzing and manipulating binary data
Papers that mentioned: 1
pypi: baidumap
api handle for baidu map
Papers that mentioned: 1
pypi: Bananas
My Bananas project. Learning how to use project skeletons and make packages.
Papers that mentioned: 1
pypi: bagpipe

Papers that mentioned: 1
pypi: babylon
ML implementations in Python.
Papers that mentioned: 1
pypi: Avant-garde
Temporary package for must-have features included in future Django versions that can be used in projects with previous ones.
Papers that mentioned: 1
pypi: avantage

Papers that mentioned: 1
pypi: autogen
Automate development tasks
Papers that mentioned: 1
pypi: autocompleter

Papers that mentioned: 1
pypi: aura
A plarform for reproducible deep learning and machine learning at scale.
Papers that mentioned: 1
pypi: audiomath
A package for recording, reading, manipulating, playing and writing sound files
Papers that mentioned: 1
pypi: audio
UNKNOWN
Papers that mentioned: 1
pypi: Attic
Deduplicated backups
Papers that mentioned: 1
pypi: atracsys
The atracsys SDK wrapper for the fusionTrack and the spryTrack
Papers that mentioned: 1
pypi: atomap
Library for analysing atomic resolution images
Papers that mentioned: 1
pypi: aText
Analysis of Text (aText)
Papers that mentioned: 1
pypi: asyncio
reference implementation of PEP 3156
Papers that mentioned: 1
pypi: associations
Assocition management package
Papers that mentioned: 1
pypi: assign
A Black Magic for support obj.__assign__ method
Papers that mentioned: 1
pypi: ase
Atomic Simulation Environment
Papers that mentioned: 1
pypi: asciinema
Terminal session recorder
Papers that mentioned: 1
pypi: artificial
Artificial tools
Papers that mentioned: 1
pypi: arteria
Helper classes for the arteria project
Papers that mentioned: 1
pypi: arr
Astronomic Reference Resolver
Papers that mentioned: 1
pypi: arithmetic
Arithmetic module
Papers that mentioned: 1
pypi: aria
MBT utils
Papers that mentioned: 1
pypi: argweaver
Ancestral recombination graph sampling method
Papers that mentioned: 1
pypi: arg
Parse command line arguments made easier...
Papers that mentioned: 1
pypi: arff
Python package for reading and writing Weka arff files
Papers that mentioned: 1
pypi: Ardi
A Python module created by Muhammad Ardi Putra. Currently working on machine learning and computer vision
Papers that mentioned: 1
pypi: Archiver
Manage files based on their SHA1 hashes
Papers that mentioned: 1
pypi: arcane
Python library for creating dynamic websites.
Papers that mentioned: 1
pypi: arachnid
Single Particle Data Analysis Suite
Papers that mentioned: 1