Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi projects 9,932

pypi: autoconf
PyAuto Configration
Papers that mentioned: 1
pypi: ChainLink

Papers that mentioned: 1
pypi: autocbei
"autoCBEI.py" can calculate the potential CBEI loci of the target CDSs and perform statistics and plots.
Papers that mentioned: 1
pypi: Authcode
Awesome authentication code
Papers that mentioned: 1
pypi: aurora
Processing Codes for Magnetotelluric Data
Papers that mentioned: 1
pypi: asterix
Manage python components startup quickly and efficiently
Papers that mentioned: 1
pypi: auk
Micro-package for compiling s-expressions into Python's predicate functions
Papers that mentioned: 1
pypi: bf
File interface library
Papers that mentioned: 1
pypi: audition
A small web framework that validates requests and provides an API.
Papers that mentioned: 1
pypi: Dyson
Dyson Selenium framework.
Papers that mentioned: 1
pypi: astar
generic A-Star path searching algorithm
Papers that mentioned: 1
pypi: assist
A library high accuracy ephemeris in REBOUND
Papers that mentioned: 1
pypi: asq
LINQ-for-objects style queries for Python iterables.
Papers that mentioned: 1
pypi: aspect
Lightweight Aspect-oriented Module for Python
Papers that mentioned: 1
pypi: chainer
A flexible framework of neural networks
Papers that mentioned: 1
pypi: asia
Papers that mentioned: 1
pypi: bam2fasta
tool for converting a bam file to fastas
Papers that mentioned: 1
pypi: asg
A tool to automatically generate schematics from SPICE netlists
Papers that mentioned: 1
pypi: asdf
Python implementation of the ASDF Standard
Papers that mentioned: 1
pypi: arviz
Exploratory analysis of Bayesian models
Papers that mentioned: 1
pypi: articles
An extremely simple blog engine based on Markdown files
Papers that mentioned: 1
pypi: arrowhead
micro-framework for flowchart-like computing
Papers that mentioned: 1
pypi: argv
Simpler command line argument parsing
Papers that mentioned: 1
pypi: argutils
Functions to build matched argument parsers and config files
Papers that mentioned: 1
pypi: ArduinoInterface
Papers that mentioned: 1
pypi: biggest
A utility for finding the biggest files and/or directories in a directory tree
Papers that mentioned: 1
pypi: bfit
β-NMR and β-NQR Data Analysis
Papers that mentioned: 1
pypi: argparse2tool
Instrument for forming Galaxy XML and CWL tool descriptions from argparse arguments
Papers that mentioned: 1
pypi: argos
Argos HDF5/NetCDF/scientific data viewer.
Papers that mentioned: 1
pypi: bg
Implementation of Breakpoint Graph data structure
Papers that mentioned: 1
pypi: ares
Python wrapper around https://cve.circl.lu.
Papers that mentioned: 1
pypi: chaco
interactive 2-dimensional plotting
Papers that mentioned: 1
pypi: bg-space
Anatomical space conventions made easy
Papers that mentioned: 1
pypi: archon
A framework for websocket APIs.
Papers that mentioned: 1
pypi: Avant-garde
Temporary package for must-have features included in future Django versions that can be used in projects with previous ones.
Papers that mentioned: 1
pypi: BibReview
BibReview is a software for managing bibliographic database. It includes avanced functions for literature reviews.
Papers that mentioned: 1
pypi: aud
aud is a python package that aims to make bulk file edits easy enough for anyone with minimal scripting or python knowledge
Papers that mentioned: 1
pypi: audioread
Multi-library, cross-platform audio decoding.
Papers that mentioned: 1
pypi: aubio
a collection of tools for music analysis
Papers that mentioned: 1
pypi: attune
Tools for tuning optical parametric amplifiers and multidimensional spectrometers.
Papers that mentioned: 1
pypi: bh
Fuzzy Linear Discriminant Analysis
Papers that mentioned: 1
pypi: docere
Tools for publishing analyses as a static site
Papers that mentioned: 1
pypi: dockit
Fuzzy the current location to pull all the submodules and specify the project if required. To launch, close and execute container with docker-compose and its relative services without change the directory.
Papers that mentioned: 1
pypi: docrep
Python package for docstring repetition
Papers that mentioned: 1
pypi: doctor
This module uses python 3 type hints to validate request and response data in Flask Python APIs and generate API documentation.
Papers that mentioned: 1
pypi: document
Wraps dicts in an object for convenient document management
Papers that mentioned: 1
pypi: vprint
Verbose Printing Utility
Papers that mentioned: 1
pypi: FlowIO
FlowIO is a Python library for reading / writing Flow Cytometry Standard (FCS) files
Papers that mentioned: 1
pypi: FlowKit
Flow Cytometry Toolkit
Papers that mentioned: 1
pypi: flows
a Python automated workflow generator
Papers that mentioned: 1
pypi: flowtracks
Library for handling of PTV trajectory database.
Papers that mentioned: 1
pypi: EmoPy
A deep neural net toolkit for emotion analysis via Facial Expression Recognition (FER)
Papers that mentioned: 1
pypi: zcalc
A fun RPN calculator
Papers that mentioned: 1
pypi: specific
Specific - spec-first web framework
Papers that mentioned: 1
pypi: xfs
XFS filesystem API
Papers that mentioned: 1
pypi: cvui
A (very) simple UI lib built on top of OpenCV drawing primitives
Papers that mentioned: 1
pypi: MLibrary
Machine Learning Algorithms Library with Numpy & pure python
Papers that mentioned: 1
pypi: snakefmt
The uncompromising Snakemake code formatter
Papers that mentioned: 1
pypi: easl

Papers that mentioned: 1
pypi: dan
Data analyzer.
Papers that mentioned: 1
pypi: DynamicTable

Papers that mentioned: 1
pypi: smpl
SiMPLe plotting and fitting
Papers that mentioned: 1
pypi: datasketch
Probabilistic data structures for processing and searching very large datasets
Papers that mentioned: 1
pypi: smote-variants
Variants of the synthetic minority oversampling technique (SMOTE) for imbalanced learning
Papers that mentioned: 1
pypi: smorgasbord
Reports coverage given a set of unicode values
Papers that mentioned: 1
pypi: smoothie
Python Exception Based Callbacks
Papers that mentioned: 1
pypi: crs
Geographic Coordinate Reference System Encapsulation and Conversion
Papers that mentioned: 1
pypi: DeepBrainSeg
Deep Learning tool for brain tumor segmentation.
Papers that mentioned: 1
pypi: WTForms
Form validation and rendering for Python web development.
Papers that mentioned: 1
pypi: splot
Visual analytics for spatial analysis with PySAL.
Papers that mentioned: 1
pypi: crt

Papers that mentioned: 1
pypi: crest
CLI to access RESTful service
Papers that mentioned: 1
pypi: sktime-dl
Deep learning extension package for sktime, a scikit-learn compatible toolbox for learning with time series data
Papers that mentioned: 1
pypi: dbf
Pure python package for reading/writing dBase, FoxPro, and Visual FoxPro .dbf files (including memos)
Papers that mentioned: 1
pypi: SequenceAligner
FASTA sequence aligner - test
Papers that mentioned: 1
pypi: words
Tool to get a large collection of words.
Papers that mentioned: 1
pypi: sequana
A set of standalone application and pipelines dedicated to NGS (new generation sequencing) analysis
Papers that mentioned: 1
pypi: nomad
simple sql migration tool to save you from becoming mad
Papers that mentioned: 1
pypi: mdt
Microstructure Diffusion Toolbox
Papers that mentioned: 1
pypi: architect
A set of tools which enhances ORMs written in Python with more features
Papers that mentioned: 1
pypi: seq-tools
Python tools for working with biological sequence data
Papers that mentioned: 1
pypi: django-mongo-auth
Django authentication based on an extensible MongoEngine user class.
Papers that mentioned: 1
pypi: recliner
UNKNOWN
Papers that mentioned: 1
pypi: finite
Yet another finite state automaton
Papers that mentioned: 1
pypi: pycrypto
Cryptographic modules for Python.
Papers that mentioned: 1
pypi: NiMARE
NiMARE: Neuroimaging Meta-Analysis Research Environment
Papers that mentioned: 1
pypi: prt
PRT reference server-side implementation
Papers that mentioned: 1
pypi: indexing
Papers that mentioned: 1
pypi: subtypes
types with new or removed constraints/properties
Papers that mentioned: 1
pypi: ComPP

Papers that mentioned: 1
pypi: ni
A microservice-based web framework for Python.
Papers that mentioned: 1
pypi: ndlib
Network Diffusion Library
Papers that mentioned: 1
pypi: bids
bids: a template for small scientific Python projects
Papers that mentioned: 1
pypi: cgat
cgat : the Computational Genomics Analysis Toolkit
Papers that mentioned: 1
pypi: cfm-id
A Python wrapper to use CFM-ID : https://cfmid.wishartlab.com
Papers that mentioned: 1
pypi: naga
A powerful Haskell/Clojure-inspired Python-hybrid-monster!
Papers that mentioned: 1
pypi: mendeleev
Pythonic periodic table of elements
Papers that mentioned: 1
pypi: tss
Threshold Secret Sharing (Shamir's secret sharing scheme).
Papers that mentioned: 1
pypi: configobj
Config file reading, writing and validation.
Papers that mentioned: 1
pypi: metabase
python wrapper for metabase api
Papers that mentioned: 1