Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi projects 9,932

pypi: potentiostat
This module implements the serial interface to the Rodeostat open source
Papers that mentioned: 1
pypi: pour
A lightweight Flask app generator.
Papers that mentioned: 1
pypi: geodata
Provide a place lookup gazeteer based on files from geonames.org
Papers that mentioned: 1
pypi: povme
POVME (Pocket VOlume MEasurer) is a Python package for extracting actionable information from ensembles of protein structures for use in drug design.
Papers that mentioned: 1
pypi: pps
Papers that mentioned: 1
pypi: Genx
A small package to get Discord Nitro
Papers that mentioned: 1
pypi: genome-tools
A toolkit for processing and plotting genomic datasets.
Papers that mentioned: 1
pypi: vegemite
Vegemite is a converter that takes a VisiCalc file and converts it to Excel
Papers that mentioned: 1
pypi: vent
A library that includes a CLI designed to serve as a platform to collect and analyze data across a flexible set of tools and technologies.
Papers that mentioned: 1
pypi: pplot

Papers that mentioned: 1
pypi: epidemiology
Wrapper to APIs for Epidemiologists
Papers that mentioned: 1
pypi: venti

Papers that mentioned: 1
pypi: epidemia
Modelling COVID-19 using SIR-like models
Papers that mentioned: 1
pypi: vera
Reference implementation of the ERAV data model for citizen science. ERAV is an extension to EAV with support for maintaining multi-faceted provenance metadata for an entity.
Papers that mentioned: 1
pypi: geoviews
GeoViews is a Python library that makes it easy to explore and visualize geographical, meteorological, and oceanographic datasets, such as those used in weather, climate, and remote sensing research.
Papers that mentioned: 1
pypi: gevent
Coroutine-based network library
Papers that mentioned: 1
pypi: geotiff
A noGDAL tool for reading and writing geotiff files
Papers that mentioned: 1
pypi: precise
The home of Schur Hierarchical Portfolios: an aesthetically pleasing version of Hierarchical Risk Parity
Papers that mentioned: 1
pypi: eponym
Decent username generator based on handpicked wordlists
Papers that mentioned: 1
pypi: GEOSLAM
Seismo-Lineament Analysis Method
Papers that mentioned: 1
pypi: predictive_imputer
Predictive imputation of missing values with sklearn interface. This is a simple implementation of the idea presented in the MissForest R package.
Papers that mentioned: 1
pypi: genomediff
GenomeDiff (*.gd) file reader
Papers that mentioned: 1
pypi: yn
Useful for validating answers of a CLI prompt
Papers that mentioned: 1
pypi: prefetch
Generic model related data prefetch framework for Django.
Papers that mentioned: 1
pypi: veranda
veranda is a place for IO related classes and operations dealing with multi-dimensional vector and raster data.
Papers that mentioned: 1
pypi: epicode
UNKNOWN
Papers that mentioned: 1
pypi: preg
Python-customisable grep-like command-line searcher.
Papers that mentioned: 1
pypi: verif
A verification program for meteorological forecasts and observations
Papers that mentioned: 1
pypi: prepro
Useful for Auto Pre-processing
Papers that mentioned: 1
pypi: esig
This package provides "rough path" tools for analysing vector time series.
Papers that mentioned: 1
pypi: preprocessor
Preprocessor for files.
Papers that mentioned: 1
pypi: GeoLocation
Papers that mentioned: 1
pypi: presence
Presence
Papers that mentioned: 1
pypi: ggtools
A package to handle the GRACE and GRACE-FO GSM data and GLDAS grid data
Papers that mentioned: 1
pypi: vertices
Convert an obj with n vertices into one with p vertices
Papers that mentioned: 1
pypi: primers
Create PCR primers with optimal lengths, tms, gc%s and free energies
Papers that mentioned: 1
pypi: prin
simplePrint
Papers that mentioned: 1
pypi: Vestige

Papers that mentioned: 1
pypi: prince
Factor analysis in Python: PCA, CA, MCA, MFA, FAMD, GPA
Papers that mentioned: 1
pypi: presto
A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
Papers that mentioned: 1
pypi: princeton
My princeton package
Papers that mentioned: 1
pypi: pretext
A package to author, build, and deploy PreTeXt projects.
Papers that mentioned: 1
pypi: protaccel
Package to infer kinetics from scRNA-seq/feature barcoding data.
Papers that mentioned: 1
pypi: EpiClass
Optimizing and predicting performance of DNA methylation biomarkers using sequence methylation density information.
Papers that mentioned: 1
pypi: ProsNet
A package for processing activPAL activity monitor data.
Papers that mentioned: 1
pypi: epicenter
Python Package for interacting with the Forio Epicenter Platform
Papers that mentioned: 1
pypi: vf
VF: Validation Functions (for Python dicts.)
Papers that mentioned: 1
pypi: youtil
Module to get youtube details
Papers that mentioned: 1
pypi: Printrun
Host software for 3D printers
Papers that mentioned: 1
pypi: etcetera
Sharing datasets via cloud storage
Papers that mentioned: 1
pypi: probability
Probability in Python 3
Papers that mentioned: 1
pypi: prizm

Papers that mentioned: 1
pypi: vhost
Tool for help creating virtual hosts
Papers that mentioned: 1
pypi: processes

Papers that mentioned: 1
pypi: prm
pip repository manager
Papers that mentioned: 1
pypi: pronto
Python frontend to ontologies.
Papers that mentioned: 1
pypi: proboscis
Extends Nose with certain TestNG like features.
Papers that mentioned: 1
pypi: prod
If they have sum(), why not product()
Papers that mentioned: 1
pypi: procedure
Simple way to use Interactor Pattern in python
Papers that mentioned: 1
pypi: ProDaMa

Papers that mentioned: 1
pypi: epa
Python wrapper for the multiple APIs available through the EPA's website.
Papers that mentioned: 1
pypi: prodigy
Papers that mentioned: 1
pypi: procfs
Python API for the Linux /proc virtual filesystem
Papers that mentioned: 1
pypi: epitopepredict
Python package for epitope prediction
Papers that mentioned: 1
pypi: procrustes
validation library
Papers that mentioned: 1
pypi: projection
Project Configuration
Papers that mentioned: 1
pypi: viax
Papers that mentioned: 1
pypi: ProjectManager
Project management for data analysis projects.
Papers that mentioned: 1
pypi: voting
Voting and election related functions.
Papers that mentioned: 1
pypi: prolog
Simple, robust features for expediting application logging configuration
Papers that mentioned: 1
pypi: proMAD
Semiquantitative densitometric measurement of protein microarrays
Papers that mentioned: 1
pypi: Propel
A package to deploy sites in virtualenv, run scripts, and deploy workers with supervisor
Papers that mentioned: 1
pypi: protosearch
Software for enumerating crystal structure prototypes to by used for active learning exploration with DFT and machine learning.
Papers that mentioned: 1
pypi: ProtParCon
ProtParCon - A framework for framework for processing molecular data and identifying parallel and convergent amino acid replacements.
Papers that mentioned: 1
pypi: you
My next dumb thing.
Papers that mentioned: 1
pypi: ptrans
A command line tool help you trans other lauguages to Chinese each other
Papers that mentioned: 1
pypi: PsychRNN
Easy-to-use package for the modeling and analysis of neural network dynamics, directed towards cognitive neuroscientists.
Papers that mentioned: 1
pypi: ptemcee
Parallel-tempered emcee.
Papers that mentioned: 1
pypi: propnet
A knowledge graph for Materials Science. Not yet ready for public use.
Papers that mentioned: 1
pypi: vice
Galactic Chemical Evolution Integrator
Papers that mentioned: 1
pypi: prosecco
Simple, extendable nlp engine that can extract data based on provided conditions.
Papers that mentioned: 1
pypi: protcomp
Python package to reconstruct protein complexes from protein pairwise interactions.
Papers that mentioned: 1
pypi: GeneXpress
A unified set of analysis and visualization tools intended for gene expression studies in Python, and an interface to the R ExpressionSet.
Papers that mentioned: 1
pypi: genetest
A package to process and analyze genotypic and phenotypic data.
Papers that mentioned: 1
pypi: gene-graph-lib
mini-library for GeneGraph tool and GCB project
Papers that mentioned: 1
pypi: proteus
Library to access Tryton server as a client
Papers that mentioned: 1
pypi: genepy3d
Python Library for 3D Quantitative Geometry in Computation Microscopy
Papers that mentioned: 1
pypi: gencove
Gencove API and CLI tool
Papers that mentioned: 1
pypi: proton
Proton Template Engine
Papers that mentioned: 1
pypi: prov
A library for W3C Provenance Data Model supporting PROV-JSON, PROV-XML and PROV-O (RDF)
Papers that mentioned: 1
pypi: GENDIS
Contains an implementation (sklearn API) of the algorithm proposed in "GENDIS: GEnetic DIscovery of Shapelets" and code to reproduce all experiments.
Papers that mentioned: 1
pypi: gemmr
Generative Modeling of Multivariate Relationships
Papers that mentioned: 1
pypi: ps_mem
A utility to report core memory usage per program
Papers that mentioned: 1
pypi: Proxi
Python Library for Proximity Network Inference.
Papers that mentioned: 1
pypi: proxima
Pythonic Makefile
Papers that mentioned: 1
pypi: gemmi
library for structural biology
Papers that mentioned: 1
pypi: proxmox
Papers that mentioned: 1
pypi: psearch
PSearch: ligand-based pharmacophore modeling and screening
Papers that mentioned: 1
pypi: PSNN
Python Simple Neural Network - PSNN is python3 lib for machine learning
Papers that mentioned: 1
pypi: pter
Console UI to manage your todo.txt file(s).
Papers that mentioned: 1