Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi projects 9,932

pypi: fso
File System Overlay - filesystem layering for unit testing
Papers that mentioned: 1
pypi: PyDAIR
Python library for diversity analysis of immune repertoire
Papers that mentioned: 1
pypi: Pycco
A Python port of Docco: the original quick-and-dirty, hundred-line-long, literate-programming-style documentation generator.
Papers that mentioned: 1
pypi: pycoalescence
A spatially explicit neutral ecology simulator using coalescence methods
Papers that mentioned: 1
pypi: fslutils
Functions working with FSL outputs
Papers that mentioned: 1
pypi: fuzzysearch
fuzzysearch is useful for finding approximate subsequence matches
Papers that mentioned: 1
pypi: pycsa
Python implementation of coupled simulated annealing (CSA)
Papers that mentioned: 1
pypi: fully

Papers that mentioned: 1
pypi: pycotools
A python toolbox for COPASI
Papers that mentioned: 1
pypi: pyconcepticon
programmatic curation of concepticon-data
Papers that mentioned: 1
pypi: fuzzer
Python wrapper for multiarch AFL
Papers that mentioned: 1
pypi: envipy
ENVI Python Tools
Papers that mentioned: 1
pypi: funniest
The funniest joke in the world
Papers that mentioned: 1
pypi: pycsw
pycsw is an OGC CSW server implementation written in Python
Papers that mentioned: 1
pypi: fuchsia
Fuchsia reduces differential equations for Feynman master integrals to canonical form
Papers that mentioned: 1
pypi: pyDEA
Package for conducting data envelopment analysis
Papers that mentioned: 1
pypi: pycparser
C parser in Python
Papers that mentioned: 1
pypi: pydantic
Data validation using Python type hints
Papers that mentioned: 1
pypi: z3
Backup ZFS snapshots to S3
Papers that mentioned: 1
pypi: pycwt
Continuous wavelet transform module for Python.
Papers that mentioned: 1
pypi: Pydap
An implementation of the Data Access Protocol.
Papers that mentioned: 1
pypi: pydensecrf
A python interface to Philipp Krähenbühl's fully-connected (dense) CRF code.
Papers that mentioned: 1
pypi: pydmps
Python implementation of Dynamic Movement Primitives (DMPs)
Papers that mentioned: 1
pypi: volcano
Volcano Library
Papers that mentioned: 1
pypi: VisualPIC
Data visualizer for PIC codes
Papers that mentioned: 1
pypi: envi
Minimal environment variables reader
Papers that mentioned: 1
pypi: FuXi
An OWL / N3-based in-memory, logic reasoning system for RDF
Papers that mentioned: 1
pypi: fubar
PBKDF2-AES-CTR-HMAC-SHA256-RSA-PKCS#1-OAEP-PSS-bencode wrapper
Papers that mentioned: 1
pypi: ftz
ftz: flush denormal numbers in numpy arrays to zero
Papers that mentioned: 1
pypi: pyDNM

Papers that mentioned: 1
pypi: VirKraken
An extension to Kraken2
Papers that mentioned: 1
pypi: pydnsbl
Async dnsbl lists checker based on asyncio/aiodns.
Papers that mentioned: 1
pypi: pyDOE2
Design of experiments for Python
Papers that mentioned: 1
pypi: pydoit
Wrapper around the i-doit API
Papers that mentioned: 1
pypi: pydot
Python interface to Graphviz's Dot
Papers that mentioned: 1
pypi: PyDriller
Framework for MSR
Papers that mentioned: 1
pypi: pyeeg
A Library for the Emotiv Insight Five Channel EEG.
Papers that mentioned: 1
pypi: fsk

Papers that mentioned: 1
pypi: PyDTMC
A full-featured and lightweight library for discrete-time Markov chains analysis.
Papers that mentioned: 1
pypi: fruitfly
Modular event-driven framework.
Papers that mentioned: 1
pypi: pydvh
pyDVH is a package for parsing DVH files.
Papers that mentioned: 1
pypi: PyDynamic
A software package for the analysis of dynamic measurements
Papers that mentioned: 1
pypi: PyGrid
A Library for Private, Secure Deep Learning
Papers that mentioned: 1
pypi: pyeasyga
A simple and easy-to-use implementation of a Genetic Algorithm library in Python
Papers that mentioned: 1
pypi: envelope
Insert a message and attachments and send e-mail / sign / encrypt contents by a single line.
Papers that mentioned: 1
pypi: enum
Robust enumerated type support in Python.
Papers that mentioned: 1
pypi: fromage
FRamewOrk for Molecular AGgregate Excitations
Papers that mentioned: 1
pypi: pyedf
Papers that mentioned: 1
pypi: frogs

Papers that mentioned: 1
pypi: pyefd
Python implementation of "Elliptic Fourier Features of a Closed Contour"
Papers that mentioned: 1
pypi: pyelectro
A Python library for analysis of electrophysiological data
Papers that mentioned: 1
pypi: PyGLtools
A genomic arithmetic tool for HiC or other paired-locus data
Papers that mentioned: 1
pypi: frog
Improved and extended turtle graphics like module
Papers that mentioned: 1
pypi: PyLD
Python implementation of the JSON-LD API
Papers that mentioned: 1
pypi: friendly
Friendlier tracebacks in any language.
Papers that mentioned: 1
pypi: Pygments
Pygments is a syntax highlighting package written in Python.
Papers that mentioned: 1
pypi: visualqc
Assistive tool for the quality control of neuroimaging data
Papers that mentioned: 1
pypi: freud
TUI REST client to analyze API endpoints
Papers that mentioned: 1
pypi: pyfastaq
Script to manipulate FASTA and FASTQ files, plus API for developers
Papers that mentioned: 1
pypi: PyGSP
Graph Signal Processing in Python
Papers that mentioned: 1
pypi: s-tui
Stress Terminal UI stress test and monitoring tool
Papers that mentioned: 1
pypi: pygmes
Run GeneMark-ES using pretrained models
Papers that mentioned: 1
pypi: VirtualHost
Apache(linux) virtual host creator
Papers that mentioned: 1
pypi: VirtualMicrobes
Virtual Microbe Evolutionary Simulator
Papers that mentioned: 1
pypi: voyage
Python Client
Papers that mentioned: 1
pypi: pyexcel
A wrapper library that provides one API to read, manipulate and writedata in different excel formats
Papers that mentioned: 1
pypi: pygnm
Python Gaussian Network Model
Papers that mentioned: 1
pypi: pyExcelerator
generating Excel 97+ files; importing Excel 95+ files; Excel files dumper; OLE2 files dumper; xls2txt, xls2csv, xls2html
Papers that mentioned: 1
pypi: PyFFI
Processing block structured binary files.
Papers that mentioned: 1
pypi: pyGSTi
A python implementation of Gate Set Tomography
Papers that mentioned: 1
pypi: pyFFTW
A pythonic wrapper around FFTW, the FFT library, presenting a unified interface for all the supported transforms.
Papers that mentioned: 1
pypi: pygmsh
Python frontend for Gmsh
Papers that mentioned: 1
pypi: PyFMI
A package for working with dynamic models compliant with the Functional Mock-Up Interface standard.
Papers that mentioned: 1
pypi: pyfpgrowth
A Python implementation of the Frequent Pattern Growth algorithm.
Papers that mentioned: 1
pypi: enumerator
enumerator is a tool built to assist in automating the often tedious task of enumerating a target or list of targets during a penetration test.
Papers that mentioned: 1
pypi: pyftdi
FTDI device driver (pure Python)
Papers that mentioned: 1
pypi: PyGTK
Python bindings for GTK
Papers that mentioned: 1
pypi: pyFUME
A Python package for fuzzy model estimation
Papers that mentioned: 1
pypi: pyg
Python Package Manager
Papers that mentioned: 1
pypi: pyiron
pyiron - an integrated development environment (IDE) for computational materials science.
Papers that mentioned: 1
pypi: pyguppyclient

Papers that mentioned: 1
pypi: PyGEP
Gene Expression Programming for Python
Papers that mentioned: 1
pypi: pygexf
UNKNOWN
Papers that mentioned: 1
pypi: PyGithub
Use the full Github API v3
Papers that mentioned: 1
pypi: pygames
Papers that mentioned: 1
pypi: pygarrayimage
Allow numpy arrays as source of texture data for pyglet.
Papers that mentioned: 1
pypi: pygbif
Python client for GBIF
Papers that mentioned: 1
pypi: pygpc
A sensitivity and uncertainty analysis toolbox for Python
Papers that mentioned: 1
pypi: PyHum
Buscombe, D., 2017, Shallow water benthic imaging and substrate characterization using recreational-grade sidescan-sonar. ENVIRONMENTAL MODELLING & SOFTWARE 89, 1-18.
Papers that mentioned: 1
pypi: ent
library for creating arbitrary data structures
Papers that mentioned: 1
pypi: pyHarmonySearch
pyHarmonySearch is a pure Python implementation of the harmony search (HS) global optimization algorithm.
Papers that mentioned: 1
pypi: pyhf
pure-Python HistFactory implementation with tensors and autodiff
Papers that mentioned: 1
pypi: pyhrf
Analysis of fMRI data based on the study of hemodynamics
Papers that mentioned: 1
pypi: pyhrv
Python toolbox for Heart Rate Variability.
Papers that mentioned: 1
pypi: engal
Simple photo gallery
Papers that mentioned: 1
pypi: pyiomica
Omics Analysis Tool Suite
Papers that mentioned: 1
pypi: pyir
Python Intermediate Representation
Papers that mentioned: 1
pypi: PyKrige
Kriging Toolkit for Python.
Papers that mentioned: 1
pypi: pyKriging
A Kriging Toolbox for Python
Papers that mentioned: 1
pypi: emvis
Visualization tools for EM data analysis
Papers that mentioned: 1