pypi projects 9,932

pypi: nPhase
nPhase is a command line ploidy agnostic phasing pipeline and algorithm which phases samples of any ploidy with sequence alignment of long and short read data to a reference sequence.
Papers that mentioned: 1
Very Likely Science (90)
pypi: mage
commads and command sets creation tool
Papers that mentioned: 1
Very Likely Science (65)
pypi: npstreams
Streaming operations on NumPy arrays
Papers that mentioned: 1
Very Likely Science (80)
pypi: Sid
Image processing for seed images
Papers that mentioned: 1
Very Likely Science (100)
pypi: magnum
Container Management project for OpenStack
Papers that mentioned: 1
Very Likely Science (65)
pypi: MAHA
Performing ETL using Machine Learning
Papers that mentioned: 1
Very Likely Science (90)
pypi: nPYc
National Phenome Centre toolbox
Papers that mentioned: 1
Very Likely Science (100)
pypi: mailchimp
Deprecated. Replaced by mailchimp-marketing - A CLI client and Python API library for the MailChimp email platform.
Papers that mentioned: 1
Likely Science (40)
pypi: major
Python implementation of the major system.
Papers that mentioned: 1
Very Likely Science (65)
pypi: malss
MALSS: MAchine Learning Support System
Papers that mentioned: 1
Very Likely Science (90)
pypi: MAnorm2-utils
To pre-process a set of ChIP-seq samples
Papers that mentioned: 1
Very Likely Science (86)
pypi: mamaslemonpy
index biological sequences and run maximial matches queries on them
Papers that mentioned: 1
Very Likely Science (100)
pypi: MAmotif
An integrative toolkit for detecting cell type-specific regulators
Papers that mentioned: 1
Very Likely Science (80)
pypi: mancala
Mancala written in Python, playable in CLI (GUI coming soon)!
Papers that mentioned: 1
Likely Science (40)
pypi: SIDR
Sequence Idenification using Decision tRees; a tool to classify DNA reads using machine learning models.
Papers that mentioned: 1
Very Likely Science (100)
pypi: nudge
Nudge
Papers that mentioned: 1
Very Likely Science (65)
pypi: numarray
numarray: array processing for numbers, strings, records and objects.
Papers that mentioned: 1
Very Likely Science (80)
pypi: maper
CLI organize PDFs by attaching bibtex metadata
Papers that mentioned: 1
Very Likely Science (65)
pypi: numdifftools
Solves automatic numerical differentiation problems in one or more variables.
Papers that mentioned: 1
Very Likely Science (100)
pypi: mapGL
Prediction of lineage-specific gain and loss of sequence elements using phylogenetic maximum parsimony.
Papers that mentioned: 1
Very Likely Science (100)
pypi: sif
python handle for reading sif images
Papers that mentioned: 1
Very Likely Science (100)
pypi: mapletree
WSGI app framework
Papers that mentioned: 1
Very Likely Science (65)
pypi: maplot
Python package for creating interactive MA-plots
Papers that mentioned: 1
Very Likely Science (80)
pypi: mapnik
Python bindings for Mapnik
Papers that mentioned: 1
Very Likely Science (80)
pypi: voting
Voting and election related functions.
Papers that mentioned: 1
Very Likely Science (80)
pypi: ProDaMa
Papers that mentioned: 1
Very Likely Science (65)
pypi: MARDS
Support Library for MARDS data serialization
Papers that mentioned: 1
Very Likely Science (65)
pypi: numpydoc
Sphinx extension to support docstrings in Numpy format
Papers that mentioned: 1
Very Likely Science (100)
pypi: MarioKart
Fun way to keep track of mario kart players
Papers that mentioned: 1
Very Likely Science (65)
pypi: nutcracker
Tools for editing resources in SCUMM games.
Papers that mentioned: 1
Likely Science (40)
pypi: siggen
Experimental extraction of Socorro signature generation
Papers that mentioned: 1
Very Likely Science (75)
pypi: NYPL
An unoffical API for the New York Public Library
Papers that mentioned: 1
Very Likely Science (65)
pypi: maths
mathematical expression manipulation engine
Papers that mentioned: 1
Very Likely Science (75)
pypi: matid
MatID is a python package for identifying and analyzing atomistic systems based on their structure.
Papers that mentioned: 1
Very Likely Science (95)
pypi: sign
inherit **kwargs from another fucntion in the signature.
Papers that mentioned: 1
Very Likely Science (85)
pypi: obis
Local data management with assistance from OpenBIS.
Papers that mentioned: 1
Very Likely Science (65)
pypi: oBIX
A client package for interacting with oBIX(Open Building Information Exchange)
Papers that mentioned: 1
Very Likely Science (65)
pypi: signals
Object notifier and pubsub
Papers that mentioned: 1
Very Likely Science (65)
pypi: obp
Open Bandit Pipeline: a python library for bandit algorithms and off-policy evaluation
Papers that mentioned: 1
Very Likely Science (100)
pypi: matlab2cpp
Matlab to C++ transpiler
Papers that mentioned: 1
Very Likely Science (65)
pypi: signature
Helper for multi-signature funcitons
Papers that mentioned: 1
Very Likely Science (65)
pypi: signet
Signet provides support for building and delivering tamper resistant python to your users and customers.
Papers that mentioned: 1
Very Likely Science (65)
pypi: Obsidian
Obsidian make web crawl easier
Papers that mentioned: 1
Very Likely Science (65)
pypi: obspyDMT
obspyDMT: A Python Toolbox for Retrieving, Processing and Management of Seismological Datasets
Papers that mentioned: 1
Very Likely Science (100)
pypi: ochre
A tiny Python package for working with colors in a pragmatic way
Papers that mentioned: 1
Likely Science (55)
pypi: silica
An automation layer between frontend and backend code. Currently supports Django and Angular.js
Papers that mentioned: 1
Very Likely Science (65)
pypi: oct2py
'Python to GNU Octave bridge --> run m-files from python.'
Papers that mentioned: 1
Very Likely Science (80)
pypi: silx
Software library for X-ray data analysis
Papers that mentioned: 1
Very Likely Science (90)
pypi: octconv
Octave Convolution Implementation in PyTorch
Papers that mentioned: 1
Very Likely Science (65)
pypi: sim2net
Simple Network Simulator (sim2net) is a discrete event simulator of mobile ad hoc networks (MANETs).
Papers that mentioned: 1
Very Likely Science (75)
pypi: simanneal
Simulated Annealing in Python
Papers that mentioned: 1
Very Likely Science (85)
pypi: simc
A dynamically typed high-level front end for C
Papers that mentioned: 1
Very Likely Science (65)
pypi: omamer
OMAmer - tree-driven and alignment-free protein assignment to sub-families
Papers that mentioned: 1
Very Likely Science (100)
pypi: OpenHands
👐OpenHands : Making Sign Language Recognition Accessible
Papers that mentioned: 1
Very Likely Science (95)
pypi: openmm
OpenMM command line script
Papers that mentioned: 1
Very Likely Science (100)
pypi: ProsNet
A package for processing activPAL activity monitor data.
Papers that mentioned: 1
Very Likely Science (85)
pypi: simoa
Scientific Python package for Simulation Output Analysis
Papers that mentioned: 1
Very Likely Science (90)
pypi: simp
Sort imports simply
Papers that mentioned: 1
Very Likely Science (65)
pypi: options
Simple, super-flexible options. Does magic upon request.
Papers that mentioned: 1
Very Likely Science (65)
pypi: simpa
Simulation and Image Processing for Photonics and Acoustics
Papers that mentioned: 1
Very Likely Science (100)
pypi: simpack
Pack of tools useful to develop 2D games
Papers that mentioned: 1
Likely Science (40)
pypi: simpful
A user-friendly Python library for fuzzy logic
Papers that mentioned: 1
Very Likely Science (100)
pypi: orthofisher
orthofisher
Papers that mentioned: 1
Very Likely Science (86)
pypi: outer
A module to manage output
Papers that mentioned: 1
Very Likely Science (65)
pypi: simsam
Simplex sampling algorithm
Papers that mentioned: 1
Very Likely Science (95)
pypi: oxa
Papers that mentioned: 1
Very Likely Science (65)
pypi: oxford
This project implements a client for the Project Oxford API's.
Papers that mentioned: 1
Very Likely Science (65)
pypi: SimSearch
Implementation of Bayesian Sets for fast similarity searches
Papers that mentioned: 1
Very Likely Science (75)
pypi: padl
Pipeline abstractions for deep learning
Papers that mentioned: 1
Very Likely Science (100)
pypi: pafy
Retrieve YouTube content and metadata
Papers that mentioned: 1
Very Likely Science (65)
pypi: papa
Simple socket and process kernel
Papers that mentioned: 1
Very Likely Science (65)
pypi: papy
flow-based, parallel and distributed computational pipelines, includes a lazy, parallel, remote, multi-task map function
Papers that mentioned: 1
Very Likely Science (100)
pypi: parameterized
Parameterized testing with any Python test framework
Papers that mentioned: 1
Very Likely Science (65)
pypi: paramiko
SSH2 protocol library
Papers that mentioned: 1
Very Likely Science (100)
pypi: sinfo
sinfo outputs version information for modules loaded in the current session, Python, and the OS.
Papers that mentioned: 1
Very Likely Science (65)
pypi: sing
Ensure a single process is running. Using lockfile and process checking.
Papers that mentioned: 1
Very Likely Science (65)
pypi: pareto
Nondominated sorting for multi-objective problems
Papers that mentioned: 1
Very Likely Science (100)
pypi: parmap
map and starmap implementations passing additional arguments and parallelizing if possible
Papers that mentioned: 1
Very Likely Science (100)
pypi: particle
Extended PDG particle data and MC identification codes
Papers that mentioned: 1
Very Likely Science (100)
pypi: path-finder
An interface for finding directories and files
Papers that mentioned: 1
Very Likely Science (65)
pypi: siro
This is a package for controlling the SIRO SmartHome Devices like rollers.
Papers that mentioned: 1
Very Likely Science (65)
pypi: pathwalker
Helper functions to walk through file paths using pathlib.
Papers that mentioned: 1
Likely Science (40)
pypi: pats
Client for the PATS API (www.pats.org.uk)
Papers that mentioned: 1
Likely Science (40)
pypi: sis
Sisyphus command runner
Papers that mentioned: 1
Very Likely Science (65)
pypi: sites
Papers that mentioned: 1
Very Likely Science (65)
pypi: Paved
Common tasks for Paver-based projects.
Papers that mentioned: 1
Very Likely Science (65)
pypi: sitetest
Python library for testing websites
Papers that mentioned: 1
Likely Science (40)
pypi: situla
Create bins for features as part of a modeling pipeline.
Papers that mentioned: 1
Very Likely Science (75)
pypi: pbxplore
PBxplore is a suite of tools dedicated to Protein Block analysis.
Papers that mentioned: 1
Very Likely Science (100)
pypi: sj2psi
Convert RNA-STAR SJ.out.tab files to 5-prime and 3-prime "percent spliced in" ("psi") scores.
Papers that mentioned: 1
Very Likely Science (100)
pypi: pcp
Performance Co-Pilot collector, monitor and instrumentation APIs
Papers that mentioned: 1
Very Likely Science (80)
pypi: pct
Perceptual Control Theory with Python
Papers that mentioned: 1
Very Likely Science (65)
pypi: pdftex
pdftex backend for matplotlib
Papers that mentioned: 1
Very Likely Science (80)
pypi: pearl
Pearl is a lightweight package manager for automating reproducible environments between different systems (Linux and OSX). It can be used for dotfiles, plugins, programs and any form of code accessible via git.
Papers that mentioned: 1
Very Likely Science (65)
pypi: pepmatch
Search tool for peptides and epitopes within a proteome, while considering potential residue substitutions.
Papers that mentioned: 1
Very Likely Science (100)
pypi: stevedore
Manage dynamic plugins for Python applications
Papers that mentioned: 1
Very Likely Science (65)
pypi: perfetto
Python API for Perfetto's Trace Processor
Papers that mentioned: 1
Very Likely Science (65)
pypi: stick
Collection of utilities for publishing Python packages to PyPI-compatible indexes hosted on S3.
Papers that mentioned: 1
Very Likely Science (85)
pypi: skiff
Python library for DigitalOcean's v2 API
Papers that mentioned: 1
Very Likely Science (65)
pypi: perform
Easily call processes from python
Papers that mentioned: 1
Very Likely Science (65)