Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: qpgraph
https://packages.ecosyste.ms/registries/bioconductor.org/packages/qpgraph
Estimation of genetic and molecular regulatory networks from high-throughput genomics data
1 version
Latest release: 12 months ago
1 dependent package
51,473 downloads total
Papers Mentioning qpgraph 9
10.1093/gbe/evaa062
The Origin and Composition of Korean Ethnicity Analyzed by Ancient and Present-Day Genome SequencesCited by: 16
Author(s): Jung-Eun Kim, Sungwon Jeon, Jae-Pil Choi, Asta Blažytė, Yeonsu Jeon, Jong‐Il Kim, Jun Ohashi, Katsushi Tokunaga, Sumio Sugano, Suthat Fucharoen, Fahd Al-Mulla, Jong Bhak
Software Mentions: 5
Published: over 4 years ago
10.1002/cam4.3526
Construction of a disease‐specific lncRNA‐miRNA‐mRNA regulatory network reveals potential regulatory axes and prognostic biomarkers for hepatocellular carcinomaCited by: 12
Author(s): Qi Zhang, Lin Sun, Qiuju Zhang, Wei Zhang, Wei Tian, Meina Liu, Yupeng Wang
Software Mentions: 5
Published: almost 4 years ago
10.1371/journal.pone.0171046
Metabox: A Toolbox for Metabolomic Data Analysis, Interpretation and Integrative ExplorationCited by: 79
Author(s): Kwanjeera Wanichthanarak, Sili Fan, Dmitry Grapov, Dinesh Kumar Barupal, Oliver Fiehn
Software Mentions: 4
Published: over 7 years ago
10.1186/1752-0509-4-121
Gene set analysis exploiting the topology of a pathwayCited by: 62
Author(s): M. Sofia Massa, Monica Chiogna, Chiara Romualdi
Software Mentions: 4
Published: about 14 years ago
10.1186/1471-2164-15-1144
Co-acting gene networks predict TRAIL responsiveness of tumour cells with high accuracyCited by: 1
Author(s): Paul G. O’Reilly, Csaba Ortutay, Gráinne Gernon, Enda O’Connell, Cathal Seoighe, Susan Boyce, Luís Serrano, Éva Szegezdi
Software Mentions: 3
Published: almost 10 years ago
10.1371/journal.pone.0015744
Serum Lipidomics Meets Cardiac Magnetic Resonance Imaging: Profiling of Subjects at Risk of Dilated CardiomyopathyCited by: 30
Author(s): Marko Sysi-Aho, Juha Koikkalainen, Tuulikki Seppänen‐Laakso, Maija Kaartinen, Johanna Kuusisto, Keijo Peuhkurinen, Satu Kärkkäinen, Margareta Antila, Kirsi-Maria Susanna Lauerma, Eeva Reissell, Raija Jurkko, Jyrki Lötjönen, Tiina Heliö, Matej Orešič
Software Mentions: 2
Published: over 13 years ago
10.3389/fgene.2021.733195
Indigenous Ancestry and Admixture in the Uruguayan PopulationCited by: 6
Author(s): Lucía Spangenberg, María Inés Fariello, Darío Arce, Gabriel Illanes, Gonzalo Greif, Jong-Yeon Shin, Seong-Keun Yoo, Jeong‐Sun Seo, Carlos Robello, Changhoon Kim, John Novembre, Mónica Sans, Hugo Naya
Software Mentions: 2
Published: about 3 years ago
10.1186/s13040-017-0140-x
Computational dynamic approaches for temporal omics data with applications to systems medicineCited by: 22
Author(s): Yong Liang, Arpad Kelemen
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0094102
Monocyte to Macrophage Differentiation Goes along with Modulation of the Plasmalogen Pattern through Transcriptional RegulationCited by: 40
Author(s): Stefan Wallner, Margot Grandl, Tatiana Konovalova, Alexander Sigrüner, Thomas Kopf, Markus Peer, Evelyn Orsó, Gerhard Liebisch, Gerd Schmitz
Software Mentions: 1
Published: over 10 years ago