bioconductor: pcaMethods | Projects

10.1371/journal.pone.0054662

Urinary MicroRNA Profiling in the Nephropathy of Type 1 Diabetes
Cited by: 136
Author(s): Christos Argyropoulos, Kai Wang, Sara McClarty, David Huang, José F. Bernardo, Demetrius Ellis, Trevor J. Orchard, David J. Galas, John P. Johnson
Software Mentions: 1
Published: almost 12 years ago

10.3390/ijms17071091

Piriformospora indica Stimulates Root Metabolism of Arabidopsis thaliana
Cited by: 33
Author(s): Nadine Strehmel, Susann Mönchgesang, Siska Herklotz, Sylvia Krüger, Jörg Ziegler, Dierk Scheel
Software Mentions: 1
Published: over 8 years ago

10.1038/s42003-021-02621-0

Age-related demethylation of the TDP-43 autoregulatory region in the human motor cortex
Cited by: 8
Author(s): Yasuhiro Koike, Akihiro Sugai, Norikazu Hara, Junko Itô, Akio Yokoseki, Tomohiko Ishihara, T. Yamagishi, Shintaro Tsuboguchi, Mari Tada, Takeshi Ikeuchi, Akiyoshi Kakita, Osamu Onodera
Software Mentions: 1
Published: about 3 years ago

10.1038/s42003-020-01480-5

Phosphatidylinositol synthesis, its selective salvage, and inter-regulation of anionic phospholipids in Toxoplasma gondii
Cited by: 9
Author(s): Bingjian Ren, Pengfei Kong, Fatima Hedar, Jos F. Brouwers, Nishith Gupta
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pone.0183504

Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production
Cited by: 24
Author(s): Michele Jorge da Silva, Maria Marta Pastina, Vander Fillipe de Souza, R. E. Schaffert, Pedro Crescêncio Souza Carneiro, R. W. Noda, José Eustáquio de Souza Carneiro, C. M. B. Damasceno, R. A. da C. Parrella
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0119307

Dentary Morphological Variation in Clevosaurus brasiliensis (Rhynchocephalia, Clevosauridae) from the Upper Triassic of Rio Grande do Sul, Brazil
Cited by: 10
Author(s): Paula Rosario Romo de Vivar Martínez, Marina Bento Soares
Software Mentions: 1
Published: over 9 years ago

10.3389/fnins.2019.01276

Spinal Cord Metabolic Signatures in Models of Fast- and Slow-Progressing SOD1G93A Amyotrophic Lateral Sclerosis
Cited by: 13
Author(s): Gabriel N. Valbuena, L Cantoni, Massimo Tortarolo, Caterina Bendotti, Hector C. Keun
Software Mentions: 1
Published: almost 5 years ago

10.3389/fnut.2021.700571

Comparative Effect of 22 Dietary Sources of Fiber on Gut Microbiota of Healthy Humans in vitro
Cited by: 15
Author(s): Marta Calatayud, Pieter Van den Abbeele, Jonas Ghyselinck, Massimo Marzorati, Eric Rohs, Anne Birkett
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2017.02046

Variability of Pyrrolizidine Alkaloid Occurrence in Species of the Grass Subfamily Pooideae (Poaceae)
Cited by: 9
Author(s): Anne-Maria Wesseling, Tobias Demetrowitsch, Karin Schwarz, Dietrich Ober
Software Mentions: 1
Published: almost 7 years ago

10.3389/fpls.2019.00885

A Novel Method for Identification and Quantification of Sulfated Flavonoids in Plants by Neutral Loss Scan Mass Spectrometry
Cited by: 20
Author(s): Niklas Kleinenkuhnen, Felix Büchel, Silke C. Gerlich, Stanislav Kopriva, Sabine Metzger
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2016.01188

QTL Detection and Elite Alleles Mining for Stigma Traits in Oryza sativa by Association Mapping
Cited by: 26
Author(s): Xiaojing Dang, Erbao Liu, Liang Yh, Qiangming Liu, Manamik Caleb Breria, Delin Hong
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2016.00596

Identification of a Candidate Gene for Panicle Length in Rice (Oryza sativa L.) Via Association and Linkage Analysis
Cited by: 46
Author(s): Erbao Liu, Yang Liu, Guocan Wu, Siyuan Zeng, Thu Giang Tran Thi, Lijun Liang, Liang Yh, Dong Zhang, Dong She, Hui Wang, Imdad Ullah Zaid, Delin Hong
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2020.01100

Uncovering Candidate Genes Controlling Major Fruit-Related Traits in Pepper via Genotype-by-Sequencing Based QTL Mapping and Genome-Wide Association Study
Cited by: 19
Author(s): Hea-Young Lee, Na-Young Ro, Abhinandan Patil, Joung‐Ho Lee, Jae-Hoon Kwon, Byoung‐Cheorl Kang
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0016989

Covering Chemical Diversity of Genetically-Modified Tomatoes Using Metabolomics for Objective Substantial Equivalence Assessment
Cited by: 97
Author(s): Miyako Kusano, Henning Redestig, Tadayoshi Hirai, Akira Oikawa, Fumio Mizutani, Atsushi Fukushima, Masanori Arita, Shin Watanabe, Masahiro Yano, Kyoko Hiwasa-Tanase, Hiroshi Ezura, Kazuki Saito
Software Mentions: 1
Published: over 13 years ago

10.3390/plants10020395

Genetic Diversity Assessment and Cultivar Identification of Cucumber (Cucumis sativus L.) Using the Fluidigm Single Nucleotide Polymorphism Assay
Cited by: 8
Author(s): Girim Park, Yunseo Choi, Jin-Kee Jung, Eun-Jo Shim, Min‐Young Kang, Sung-Chur Sim, Sang-Min Chung, Gung Pyo Lee, Young-Hoon Park
Software Mentions: 1
Published: over 3 years ago

10.3390/molecules25215125

PSYCHE—A Valuable Experiment in Plant NMR-Metabolomics
Cited by: 8
Author(s): Pauline Stark, Caroline Zab, Andrea Porzel, Katrin Franke, Paride Rizzo, Ludger A. Wessjohann
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2018.01439

A Systems Analysis With “Simplified Source-Sink Model” Reveals Metabolic Reprogramming in a Pair of Source-to-Sink Organs During Early Fruit Development in Tomato by LED Light Treatments
Cited by: 7
Author(s): Atsushi Fukushima, Shoko Hikosaka, Makoto Kobayashi, Tomoko Nishizawa, Kazuki Saito, Eiji Gotō, Miyako Kusano
Software Mentions: 1
Published: about 6 years ago

10.1186/2047-217X-1-12

Single-cell sequencing analysis characterizes common and cell-lineage-specific mutations in a muscle-invasive bladder cancer
Cited by: 100
Author(s): Yingrui Li, Xun Xu, Liying Song, Yong Hou, Zesong Li, Shirley Tsang, Fuqiang Li, Kate M. Im, Kui Wu, Huawei Wu, Xiaofei Ye, Guibo Li, Linlin Wang, Bo Zhang, Jie Liang, Wei Xie, Renhua Wu, Hui Jiang, Xiao Liu, Chang Yu, Hancheng Zheng, Min Jian, Lei Nie, Lei Wan, Min Shi, Xiaojuan Sun, Aifa Tang, Guangwu Guo, Yaoting Gui, Zhiming Cai, Jingxiang Li, Wen Wang, Lu Zhang, Xiuqing Zhang, Lars Bolund, Karsten Kristiansen, Jian Wang, Huanming Yang, Michael Dean, Jun Wang
Software Mentions: 1
Published: about 12 years ago

10.1186/1752-0509-5-176

Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics
Cited by: 36
Author(s): Henning Redestig, Miyako Kusano, Kaworu Ebana, Makoto Kobayashi, Akira Oikawa, Yuji Okazaki, Fumio Mizutani, Masanori Arita, Naoko Fujita, Kazuki Saito
Software Mentions: 1
Published: about 13 years ago

10.1186/s12889-015-2611-7

Breastfeeding is associated with waist-to-height ratio in young adults
Cited by: 5
Author(s): Adam D Bohr, Jason D. Boardman, Benjamin W. Domingue, Matthew B. McQueen
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41438-020-00342-9

Genome-wide SNP discovery and core marker sets for assessment of genetic variations in cultivated pumpkin (Cucurbita spp.)
Cited by: 21
Author(s): Nam Ngoc Nguyen, Minkyung Kim, Jin-Kee Jung, Eun-Jo Shim, Sang-Min Chung, Young-Hoon Park, Gung Pyo Lee, Sung-Chur Sim
Software Mentions: 1
Published: over 4 years ago

10.1186/s12870-020-2247-3

Repair of sub-lethal freezing damage in leaves of Arabidopsis thaliana
Cited by: 7
Author(s): Kora Vyse, Johanna Penzlin, Kjell Sergeant, Dirk K. Hincha, Rajeev Arora, Ellen Zuther
Software Mentions: 1
Published: almost 5 years ago

10.1093/jxb/erx049

Genetic dissection of metabolite variation in Arabidopsis seeds: evidence for mQTL hotspots and a master regulatory locus of seed metabolism
Cited by: 33
Author(s): Dominic Knoch, David Riewe, Rhonda C. Meyer, Anastassia Boudichevskaia, Renate Schmidt, Thomas Altmann
Software Mentions: 1
Published: over 7 years ago

10.1038/srep27475

Detection of Burkholderia pseudomallei toxin-mediated inhibition of protein synthesis using a Caenorhabditis elegans ugt–29 biosensor
Cited by: 16
Author(s): Rui Rui Wong, Cin Kong, Song Hua Lee, Sheila Nathan
Software Mentions: 1
Published: over 8 years ago

10.1038/srep44394

Metabolomics of the tick-Borrelia interaction during the nymphal tick blood meal
Cited by: 19
Author(s): J. Charles Hoxmeier, Amy C. Fleshman, Corey D. Broeckling, Jessica E. Prenni, Marc C. Dolan, Kenneth L. Gage, Lars Eisen
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-58030-6

Biomarker discovery for chronic liver diseases by multi-omics – a preclinical case study
Cited by: 26
Author(s): Daniel Veyel, Kathrin Wenger, Andre Broermann, Tom Bretschneider, Andreas H. Luippold, Bartlomiej Krawczyk, Wolfgang Rist, Eric J. Simon
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12967-020-02557-9

Changes in lipid composition associated with electronic cigarette use
Cited by: 12
Author(s): Holly R. Middlekauff, Kevin J. William, Baolong Su, Kacey Haptonstall, Jesús A. Araujo, Xiaohui Wu, Jason Kim, Tamer Sallam
Software Mentions: 1
Published: about 4 years ago

10.1186/s12864-017-4126-3

Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana
Cited by: 56
Author(s): Majken Pagter, Jessica Alpers, Alexander Erban, Joachim Kopka, Ellen Zuther, Dirk K. Hincha
Software Mentions: 1
Published: about 7 years ago

10.1186/s12906-021-03299-x

Vincetoxicum arnottianum modulates motility features and metastatic marker expression in pediatric rhabdomyosarcoma by stabilizing the actin cytoskeleton
Cited by: 3
Author(s): Anna Adamus, Iftikhar Ali, M. Sattin, Luai Al-Hileh, Jan Lisec, Marcus Frank, Guido Seitz, Nadja Engel
Software Mentions: 1
Published: over 3 years ago

Ecosyste.ms: Papers

Projects: bioconductor: pcaMethods

Papers Mentioning pcaMethods 129