Projects: bioconductor: paxtoolsr
https://packages.ecosyste.ms/registries/bioconductor.org/packages/paxtoolsr
Access Pathways from Multiple Databases Through BioPAX and Pathway Commons
1 version
Latest release: almost 2 years ago
22,663 downloads total
Enhanced Analysis
Repository Activity:
Repository Owner:
BioPAX (organization)
BioPAX is a standard language that aims to enable integration, exchange, visualization and analysis of biological pathway data. Institutional
BioPAX is a standard language that aims to enable integration, exchange, visualization and analysis of biological pathway data. Institutional
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+15
Institutional repository owner
Repository owned by research institution -
+14
Science terms in README
7 scientific terms found in README
Penalties:
-
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (100)
Papers Mentioning paxtoolsr 3
10.3390/metabo9100200
The metaRbolomics Toolbox in Bioconductor and beyondCited by: 61
Author(s): Jan Stanstrup, Corey D. Broeckling, Rick Helmus, Nils Hoffmann, Ewy A. Mathé, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Michael Rainer, Reza M. Salek, Tobias Schulze, Emma L. Schymanski, Michael A. Stravs, Etienne Thévenot, Hendrik Treutler, Ralf Weber, Egon Willighagen, Michael Witting, Steffen Neumann
Software Mentions: 92
Published: almost 6 years ago
10.1371/journal.pone.0234669
netboxr: Automated discovery of biological process modules by network analysis in RCited by: 2
Author(s): Eric Minwei Liu, Augustin Luna, Guanlan Dong, Chris Sander
Software Mentions: 7
Published: over 4 years ago
10.1186/s12967-019-1909-0
ALS blood expression profiling identifies new biomarkers, patient subgroups, and evidence for neutrophilia and hypoxiaCited by: 38
Author(s): William R. Swindell, Colin Kruse, Edward O. List, Darlene E. Berryman, John J. Kopchick
Software Mentions: 7
Published: about 6 years ago