Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: marray

https://packages.ecosyste.ms/registries/bioconductor.org/packages/marray

Exploratory analysis for two-color spotted microarray data
2 versions
Latest release: about 1 year ago
21 dependent packages
521,306 downloads total

Papers Mentioning marray 62

10.1002/pmic.201400392
Visualization of proteomics data using R and Bioconductor
Cited by: 46
Author(s): Laurent Gatto, Lisa M. Breckels, Thomas Naake, Sebastian Gibb
Software Mentions: 62
Published: over 9 years ago
10.1155/2009/201325
Analysis of Array-CGH Data Using the R and Bioconductor Software Suite
Cited by: 8
Author(s): Winfried Hofmann, Anja Weigmann, Marcel Tauscher, Britta Skawran, Tim Focken, R Buurman, Luzie U. Wingen, Brigitte Schlegelberger, Doris Steinemann
Software Mentions: 11
Published: almost 16 years ago
10.1186/1471-2105-7-509
CoXpress: differential co-expression in gene expression data
Cited by: 149
Author(s): Michael Watson
Software Mentions: 11
Published: almost 18 years ago
10.1016/j.ccell.2017.08.017
Integrated Molecular Meta-Analysis of 1,000 Pediatric High-Grade and Diffuse Intrinsic Pontine Glioma
Cited by: 662
Author(s): Alan Mackay, Anna Burford, Diana Carvalho, Elisa Izquierdo, Janat Fazal-Salom, Kathryn R. Taylor, Lynn Bjerke, Matthew Clarke, Maria Vinci, Meera Nandhabalan, Sara Temelso, Sergey Popov, Valeria Molinari, Pichai Raman, Angela J. Waanders, Harry Han, Saumya Gupta, Lynley V. Marshall, Stergios Zacharoulis, Sucheta Vaidya, Henry Mandeville, Leslie Bridges, Andrew Martin, Safa Al‐Sarraj, Christopher Chandler, Ho Keung Ng, Xingang Li, Kun Mu, Saoussen Trabelsi, Dorra H’mida-Ben Brahim, Alexei N. Kisljakov, Д. М. Коновалов, Andrew S. Moore, Ángel M. Carcaboso, Mariona Suñol, Carmen de Torres, Ofelia Cruz, Jaume Mora, Л. И. Шац, João N. Stávale, Lucas Tadeu Bidinotto, Rui Manuel Reis, Natacha Entz‐Werlé, Michael Farrell, Jane Cryan, Darach Crimmins, John Caird, Jane Pears, Michelle Monje, Marie‐Anne Debily, David Castel, Jacques Grill, Cynthia Hawkins, Hamid Nikbakht, Nada Jabado, Suzanne J. Baker, Stefan M. Pfister, David Jones, Maryam Fouladi, André O. von Bueren, Michael Baudis, Adam Resnick, Chris Jones
Software Mentions: 11
Published: about 7 years ago
10.1155/2008/147563
Bioinformatic Tools for Inferring Functional Information from Plant Microarray Data: Tools for the First Steps
Cited by: 6
Author(s): Grier P. Page, Issa Coulibaly
Software Mentions: 10
Published: over 16 years ago
10.1186/gb-2004-5-10-r80
Cited by: 10,848
Author(s): Robert Gentleman, Vincent J. Carey, Douglas M. Bates, Benjamin M. Bolstad, Marcel Dettling, Sandrine Dudoit, Byron Ellis, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Maria Iacus, Rafael A. Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony Rossini, Günther Sawitzki, Colin A. Smith, Gordon K. Smyth, Luke Tierney, Jean Yee Hwa Yang, Jianhua Zhang
Software Mentions: 10
Published: almost 21 years ago
10.18632/oncotarget.9346
<i>De novo</i> HAPLN1 expression hallmarks Wnt-induced stem cell and fibrogenic networks leading to aggressive human hepatocellular carcinomas
Cited by: 30
Author(s): Sihem Mebarki, Romain Désert, Laurent Sulpice, Marie Sicard, Mireille Desille, Frédéric Canal, Hélène Dubois-Pot Schneider, Damien Bergeat, Bruno Turlin, Pascale Bellaud, Elise Lavergne, Rémy Le Guével, Anne Corlu, Christine Perret, Cédric Coulouarn, Bruno Clément, Orlando Musso
Software Mentions: 8
Published: over 8 years ago
10.1186/1471-2105-7-467
Goulphar: rapid access and expertise for standard two-color microarray normalization methods
Cited by: 55
Author(s): Sophie Lemoine, Florence Combes, Nicolas Servant, Stéphane Le Crom
Software Mentions: 6
Published: about 18 years ago
10.1371/journal.pone.0037714
Dynamic Gene Expression in the Human Cerebral Cortex Distinguishes Children from Adults
Cited by: 32
Author(s): Kirstin N. Sterner, Amy Weckle, Harry T. Chugani, Adi L. Tarca, Chet C. Sherwood, Patrick R. Hof, Christopher W. Kuzawa, Amy M. Boddy, Asad Abbas, Ryan L. Raaum, Lucie Grégoire, Leonard Lipovich, Lawrence I. Grossman, Monica Uddin, Morris Goodman, Derek E. Wildman
Software Mentions: 6
Published: over 12 years ago
10.1186/s40246-021-00313-8
Identification of differentially expressed genes and signaling pathways in human conjunctiva and reproductive tract infected with Chlamydia trachomatis
Cited by: 3
Author(s): Guodong Zhu, Xun‐Jie Cao, Yaping Li, Jiaxin Li, Zi-Jian Leng, Lisha Xie, Xu‐Guang Guo
Software Mentions: 6
Published: over 3 years ago
10.1186/gb-2007-8-9-r190
DetectiV: visualization, normalization and significance testing for pathogen-detection microarray data
Cited by: 29
Author(s): Michael Watson, Juliet Dukes, Abu-Bakr Abu-Median, Donald P. King, Paul Britton
Software Mentions: 5
Published: almost 18 years ago
10.1186/1471-2105-10-203
Integrated analysis of DNA copy number and gene expression microarray data using gene sets
Cited by: 57
Author(s): Renée X. de Menezes, Marten Boetzer, Melle Sieswerda, Gert‐Jan B. van Ommen, Judith M. Boer
Software Mentions: 5
Published: over 15 years ago
10.1186/1471-2164-15-749
Metagenomics reveals that detoxification systems are underrepresented in marine bacterial communities
Cited by: 22
Author(s): Johan Bengtsson‐Palme, Magnus Alm Rosenblad, Mikael Molin, Anders Blomberg
Software Mentions: 5
Published: almost 11 years ago
10.1186/1471-2105-6-98
ProGenExpress: Visualization of quantitative data on prokaryotic genomes
Cited by: 6
Author(s): Michael Watson
Software Mentions: 5
Published: over 19 years ago
10.1186/1471-2164-15-763
Transcriptome of Saccharomyces cerevisiae during production of D-xylonate
Cited by: 5
Author(s): Dominik Mojžita, Merja Oja, Eija Rintala, Marilyn G. Wiebe, Merja Penttilä, Laura Ruohonen
Software Mentions: 4
Published: almost 11 years ago
10.1371/journal.pone.0005120
Integrated Functional, Gene Expression and Genomic Analysis for the Identification of Cancer Targets
Cited by: 106
Author(s): Elizabeth Iorns, Christopher J. Lord, Anita Grigoriadis, Sarah McDonald, Kerry Fenwick, Alan Mackay, Charles A. Mein, Rachael Natrajan, Kay Savage, Narinder Tamber, Jorge S. Reis‐Filho, Nicholas C. Turner, Alan Ashworth
Software Mentions: 4
Published: over 15 years ago
10.1038/s41598-018-34964-w
Inducing controlled cell cycle arrest and re-entry during asexual proliferation of Plasmodium falciparum malaria parasites
Cited by: 29
Author(s): Riëtte van Biljon, Jandeli Niemand, Roelof van Wyk, Katherine Clark, Bianca K. Verlinden, Clarissa Abrie, Hilde von Grüning, Werner Smidt, Annél Smit, Janette Reader, Heather J. Painter, Manuel Llinás, Christian Doerig, Lyn‐Marié Birkholtz
Software Mentions: 4
Published: about 6 years ago
10.1371/journal.pone.0034534
MicroRNA Dysregulation in the Spinal Cord following Traumatic Injury
Cited by: 113
Author(s): Mónica Yunta, Manuel Nieto‐Díaz, Francisco J. Esteban, Marcos Caballero-López, Rosa Navarro-Ruíz, David Reigada, D. Wolfgang Pita-Thomas, Ángela del Águila, Teresa Muñoz‐Galdeano, Rodrigo M. Maza
Software Mentions: 4
Published: over 12 years ago
10.1186/gb-2008-9-11-r164
Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata
Cited by: 50
Author(s): Gaëlle Lelandais, Véronique Tanty, Colette Geneix, Catherine Etchebest, Claude Jacq, Frédéric Devaux
Software Mentions: 4
Published: almost 17 years ago
10.1186/s13072-021-00393-9
H3K36 methylation reprograms gene expression to drive early gametocyte development in Plasmodium falciparum
Cited by: 10
Author(s): Jessica Connacher, Gabrielle A. Josling, Lindsey M. Orchard, Janette Reader, Manuel Llinás, Lyn‐Marié Birkholtz
Software Mentions: 4
Published: over 3 years ago
10.1186/s13073-014-0059-5
A systems biology approach reveals a link between systemic cytokines and skeletal muscle energy metabolism in a rodent smoking model and human COPD
Cited by: 21
Author(s): Peter K. Davidsen, John Herbert, Philipp Antczak, Kim Clarke, Elisabet Ferrer, Víctor I. Peinado, C. González, Josep Roca, Stuart Egginton, Joan Albert Barberà, Francesco Falciani
Software Mentions: 4
Published: over 10 years ago
10.1186/1475-2867-9-12
Gene expression profiling predicts a three-gene expression signature of endometrial adenocarcinoma in a rat model
Cited by: 9
Author(s): Sandra Karlsson, Björn Olsson, Karin Klinga‐Levan
Software Mentions: 3
Published: almost 16 years ago
10.1371/journal.pgen.1001135
Analysis of the Basidiomycete Coprinopsis cinerea Reveals Conservation of the Core Meiotic Expression Program over Half a Billion Years of Evolution
Cited by: 34
Author(s): Claire Burns, Jason E. Stajich, Andreas Rechtsteiner, Lorna A. Casselton, Sean E. Hanlon, Sarah K. Wilke, Oleksandr P. Savytskyy, Allen C. Gathman, Walt W. Lilly, Jason D. Lieb, Miriam E. Zolan, Patricia J. Pukkila
Software Mentions: 3
Published: about 14 years ago
10.1186/1471-2164-11-165
Depletion of the non-coding regulatory 6S RNA in E. coli causes a surprising reduction in the expression of the translation machinery
Cited by: 53
Author(s): Thomas Neußer, Tino Polen, René Geißen, Rolf Wagner
Software Mentions: 3
Published: over 14 years ago
10.1038/srep46533
A New Approach to Evaluating Aberrant DNA Methylation Profiles in Hepatocellular Carcinoma as Potential Biomarkers
Cited by: 7
Author(s): Yuan Yang, Lan‐Juan Zhao, Bo Huang, Guoqing Hou, Beibei Zhou, Jin Qian, Shengxian Yuan, Huasheng Xiao, Minghui Li, Weiping Zhou
Software Mentions: 3
Published: over 7 years ago
10.14814/phy2.12225
Pattern recognition receptors in the gut: analysis of their expression along the intestinal tract and the crypt/villus axis
Cited by: 44
Author(s): Pascal Gourbeyre, Mustapha Berri, Yannick Lippi, François Meurens, Silvia Vincent‐Naulleau, Joëlle Laffitte, Claire Rogel‐Gaillard, Philippe Pinton, Isabelle P. Oswald
Software Mentions: 3
Published: almost 10 years ago
10.1371/journal.pone.0004839
Expression Analysis of the Theileria parva Subtelomere-Encoded Variable Secreted Protein Gene Family
Cited by: 39
Author(s): Jacqueline Schmuckli‐Maurer, Carlo Casanova, Stéfanie Schmied, Sarah Affentranger, Iana Parvanova, S. Kang'a, Vishvanath Nene, Frank Katzer, Declan J. McKeever, Joachim Müller, Richard P. Bishop, Arnab Pain, Dirk Dobbelaere
Software Mentions: 3
Published: over 15 years ago
10.1371/journal.pone.0054398
miRNA Gene Promoters Are Frequent Targets of Aberrant DNA Methylation in Human Breast Cancer
Cited by: 114
Author(s): Lukáš Vrba, J. Muñoz-Rodríguez, Martha R. Stampfer, Bernard W. Futscher
Software Mentions: 3
Published: almost 12 years ago
10.3389/fpls.2018.01453
Ectopic Transplastomic Expression of a Synthetic MatK Gene Leads to Cotyledon-Specific Leaf Variegation
Cited by: 12
Author(s): Yujiao Qu, Julia Legen, J Arndt, Stephanie Henkel, Galina Hoppe, Christopher Thieme, Giovanna Ranzini, Jose M. Muiño, Andreas Weihe, Uwe Ohler, Gert Weber, Oren Ostersetzer, Christian Schmitz‐Linneweber
Software Mentions: 3
Published: about 6 years ago
10.1186/gb-2007-8-5-r81
Tilescope: online analysis pipeline for high-density tiling microarray data
Cited by: 41
Author(s): Zhengdong D. Zhang, Joel Rozowsky, Hugo Y. K. Lam, Jie Du, M Snyder, Mark Gerstein
Software Mentions: 3
Published: almost 18 years ago
10.1186/1471-2407-14-246
Gene expression profiling reveals activation of the FA/BRCA pathway in advanced squamous cervical cancer with intrinsic resistance and therapy failure
Cited by: 41
Author(s): Ovidiu Bălăcescu, Loredana Bălăcescu, Oana Tudoran, Nicolae Todor, Meda Rus, Rareș Buiga, Sergiu Şuşman, Bogdan Fetică, Laura Pop, Laura Iuliana Maja, Simona Vișan, Claudia Ordeanu, Ioana Berindan‐Neagoe, Viorica Nagy
Software Mentions: 3
Published: over 10 years ago
10.1371/journal.pone.0016344
Genomewide Analyses Define Different Modes of Transcriptional Regulation by Peroxisome Proliferator-Activated Receptor-β/δ (PPARβ/δ)
Cited by: 76
Author(s): Till Adhikary, Kerstin Kaddatz, Florian Finkernagel, Anne Schönbauer, Wolfgang Meißner, Maren Scharfe, Michael Jarek, Helmut Blöcker, Sabine Müller‐Brüsselbach, Rolf Müller
Software Mentions: 3
Published: almost 14 years ago
10.1371/journal.pone.0012976
Global MicroRNA Characterization Reveals That miR-103 Is Involved in IGF-1 Stimulated Mouse Intestinal Cell Proliferation
Cited by: 39
Author(s): Yin Liao, Bo Lönnerdal
Software Mentions: 2
Published: about 14 years ago
10.1186/1471-2105-6-37
Cited by: 24
Author(s): Timothy T. Lu, Christine Costello, Peter J.P. Croucher, Robert Häsler, Günther Deuschl, Stefan Schreiber
Software Mentions: 2
Published: almost 20 years ago
10.1186/1471-2407-5-68
Overexpression of cathepsin f, matrix metalloproteinases 11 and 12 in cervical cancer
Cited by: 76
Author(s): Guelaguetza Vázquez-Ortíz, Patricia Piña‐Sánchez, Karla Moreno Vázquez, A. López Dueñas, Lucía Taja, Patricia Mendoza, José García, Mauricio Salcedo
Software Mentions: 2
Published: over 19 years ago
10.1186/1471-213X-9-65
Identification of known and novel pancreas genes expressed downstream of Nkx2.2 during development
Cited by: 31
Author(s): Keith R. Anderson, Peter White, Klaus H. Kaestner, Lori Sussel
Software Mentions: 2
Published: almost 15 years ago
10.1186/1471-2164-8-307
Living with an imperfect cell wall: compensation of femAB inactivation in Staphylococcus aureus
Cited by: 34
Author(s): Judith Hübscher, Andrea Jansen, Oliver Kotte, Juliane Schäfer, Paul Majcherczyk, Llinos G. Harris, Gabriele Bierbaum, Matthias Heinemann, Brigitte Berger‐Bächi
Software Mentions: 2
Published: about 17 years ago
10.1186/1471-2164-8-370
The functional genome of CA1 and CA3 neurons under native conditions and in response to ischemia
Cited by: 41
Author(s): Dieter Newrzella, Payam S. Pahlavan, Carola Krüger, C.L. Boehm, Oliver Sorgenfrei, Helmut Schröck, Gisela Eisenhardt, Nadine Bischoff, Gerhard Vogt, Oliver Wafzig, Moritz J. Rossner, Martin H. Maurer, Holger Hiemisch, A. Bach, Wolfgang Kuschinsky, Armin Schneider
Software Mentions: 2
Published: about 17 years ago
10.1186/1755-8794-2-54
MicroRNA-125a is over-expressed in insulin target tissues in a spontaneous rat model of Type 2 Diabetes
Cited by: 111
Author(s): Blanca Herrera, Helen Lockstone, Jennifer Taylor, Quin F. Wills, Pamela J. Kaisaki, Amy Barrett, Carme Camps, Christina Fernández, Jiannis Ragoussis, Dominique Guyader, Mark I. McCarthy, Cecilia M. Lindgren
Software Mentions: 2
Published: about 15 years ago
10.1186/1471-2229-10-273
Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees
Cited by: 37
Author(s): Caroline Côté, Francis Boileau, Vicky Roy, Mario Ouellet, Caroline Levasseur, Marie-Josée Morency, Janice E. K. Cooke, Armand Séguin, John Mackay
Software Mentions: 2
Published: almost 14 years ago
10.1186/1752-0509-5-120
Systems biology of bacterial nitrogen fixation: High-throughput technology and its integrative description with constraint-based modeling
Cited by: 44
Author(s): Osbaldo Resendis‐Antonio, Magdalena Hernández, Emmanuel Salazar, Sandra Contreras, Gabriel Martínez Batallar, Yolanda Mora, Sergio Encarnación
Software Mentions: 2
Published: almost 14 years ago
10.1111/j.1365-2958.2007.06020.x
Co-ordinated regulation of gluconate catabolism and glucose uptake in Corynebacterium glutamicum by two functionally equivalent transcriptional regulators, GntR1 and GntR2
Cited by: 139
Author(s): Julia Frunzke, Verena Engels, Sonja Hasenbein, Cornelia Gätgens, Michael Bott
Software Mentions: 2
Published: almost 17 years ago
10.1371/journal.pbio.1001420
Adaptive Evolution and the Birth of CTCF Binding Sites in the Drosophila Genome
Cited by: 58
Author(s): Xiaochun Ni, Yong E. Zhang, Nicolas Nègre, Sidi Chen, Manyuan Long, Kevin P. White
Software Mentions: 2
Published: about 12 years ago
10.1371/journal.pgen.1002620
Diverse Forms of RPS9 Splicing Are Part of an Evolving Autoregulatory Circuit
Cited by: 30
Author(s): Alex Plocik, Christine Guthrie
Software Mentions: 2
Published: over 12 years ago
10.1186/1471-2105-8-142
Pre-processing Agilent microarray data
Cited by: 181
Author(s): Marianna Zahurak, Giovanni Parmigiani, Wayne Yu, Robert B. Scharpf, David M. Berman, Edward M. Schaeffer, Shabana Shabbeer, Leslie Cope
Software Mentions: 2
Published: over 17 years ago
10.1371/journal.pone.0055603
Lasting Effects on Body Weight and Mammary Gland Gene Expression in Female Mice upon Early Life Exposure to n-3 but Not n-6 High-Fat Diets
Cited by: 9
Author(s): Mirjam Luijten, Amar V. Singh, Caleb A. Bastian, Anja Westerman, M. Michele Pisano, Jeroen L. A. Pennings, Aart Verhoef, Maia L. Green, Aldert H. Piersma, Annemieke de Vries, Thomas B. Knudsen
Software Mentions: 2
Published: almost 12 years ago
10.1371/journal.pone.0029596
Trypanosoma cruzi Gene Expression in Response to Gamma Radiation
Cited by: 14
Author(s): Priscila Grynberg, Danielle Gomes Passos‐Silva, Marina Moraes Mourão, Roberto Hirata, Andréa Mara Macedo, Carlos Renato Machado, Daniella Castanheira Bartholomeu, Glória Regina Franco
Software Mentions: 2
Published: almost 13 years ago
10.1371/journal.pone.0092552
Defects in the C. elegans acyl-CoA Synthase, acs-3, and Nuclear Hormone Receptor, nhr-25, Cause Sensitivity to Distinct, but Overlapping Stresses
Cited by: 35
Author(s): Jordan D. Ward, Brendan Mullaney, Benjamin J. Schiller, Le He, Sarah Petnic, Carole Couillault, Nathalie Pujol, Teresita U. Bernal, Marc R. Van Gilst, Kaveh Ashrafi, Jonathan J. Ewbank, Keith R. Yamamoto
Software Mentions: 2
Published: over 10 years ago
10.3389/fcimb.2012.00158
Crp Induces Switching of the CsrB and CsrC RNAs in Yersinia pseudotuberculosis and Links Nutritional Status to Virulence
Cited by: 55
Author(s): Ann Kathrin Heroven, Maike Sest, Fabrizio Pisano, Matthias Scheb-Wetzel, Rebekka Steinmann, Katja Böhme, Johannes Klein, Richard Münch, Dietmar Schomburg, Petra Dersch
Software Mentions: 2
Published: almost 13 years ago
10.3389/fimmu.2021.709910
Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture
Cited by: 4
Author(s): Nicole C. Smith, Navaneethaiyer Umasuthan, Surendra Kumar, Nardos Tesfaye Woldemariam, Rune Andreassen, Sherri L. Christian, Matthew L. Rise
Software Mentions: 2
Published: about 3 years ago
10.3389/fmicb.2021.706934
The Small Protein YmoA Controls the Csr System and Adjusts Expression of Virulence-Relevant Traits of Yersinia pseudotuberculosis
Cited by: 5
Author(s): Katja Böhme, Ann Kathrin Heroven, Stephanie Lobedann, Yuzhu Guo, Anne-Sophie Stolle, Petra Dersch
Software Mentions: 2
Published: over 3 years ago
10.3389/fmicb.2020.544045
Regulation of γ-Aminobutyrate (GABA) Utilization in Corynebacterium glutamicum by the PucR-Type Transcriptional Regulator GabR and by Alternative Nitrogen and Carbon Sources
Cited by: 10
Author(s): Lingfeng Zhu, Christina Mack, Astrid Wirtz, Angela Kranz, Tino Polen, Meike Baumgart, Michael Bott
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0032221
Effect of the Citrus Lycopene β-Cyclase Transgene on Carotenoid Metabolism in Transgenic Tomato Fruits
Cited by: 32
Author(s): Fei Guo, Wei Zhou, Jiancheng Zhang, Qiang Xu, Xiuxin Deng
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0002974
Agrobacterium-Mediated Transformation of Tomato Elicits Unexpected Flower Phenotypes with Similar Gene Expression Profiles
Cited by: 4
Author(s): Yi Hong Wang, Michael A. Campbell
Software Mentions: 1
Published: about 16 years ago
10.1371/journal.pone.0063011
Regulation of TAK1/TAB1-Mediated IL-1β Signaling by Cytoplasmic PPARβ/δ
Cited by: 14
Author(s): Josefine Stockert, Alexander Wolf, Kerstin Kaddatz, Evelyn Schnitzer, Florian Finkernagel, Wolfgang Meißner, Sabine Müller‐Brüsselbach, Michael Kracht, Rolf Müller
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pgen.1001203
Epigenetic Silencing of Spermatocyte-Specific and Neuronal Genes by SUMO Modification of the Transcription Factor Sp3
Cited by: 35
Author(s): Bastian Stielow, Imme Krüger, Rolf Diezko, Florian Finkernagel, Nynke Gillemans, John Kong-a-San, Sjaak Philipsen, Guntram Suske
Software Mentions: 1
Published: almost 14 years ago
10.7717/peerj.610
Construction and comparison of gene co-expression networks shows complex plant immune responses
Cited by: 25
Author(s): Luis Leal, Camilo López, Liliana López‐Kleine
Software Mentions: 1
Published: about 10 years ago
10.1002/mbo3.150
Subtilase SprP exerts pleiotropic effects in <i>Pseudomonas aeruginosa</i>
Cited by: 12
Author(s): Alexander Pelzer, Tino Polen, Horst Funken, Frank Rosenau, Susanne Wilhelm, Michael Bott, Karl‐Erich Jaeger
Software Mentions: 1
Published: almost 11 years ago
10.1186/1471-2164-6-99
Comparing independent microarray studies: the case of human embryonic stem cells
Cited by: 40
Author(s): Mayte Suárez‐Fariñas, Scott Noggle, Michael Heke, Ali Hemmati‐Brivanlou, Marcelo O. Magnasco
Software Mentions: 1
Published: over 19 years ago
10.1155/2018/7329576
Gene Coexpression Network Comparison via Persistent Homology
Cited by: 6
Author(s): Ali Nabi Duman, Harun Pirim
Software Mentions: 1
Published: about 6 years ago
10.1186/1471-2164-9-302
Performance comparison of two microarray platforms to assess differential gene expression in human monocyte and macrophage cells
Cited by: 43
Author(s): Seraya Maouche, Odette Poirier, Tiphaine Godefroy, Robert Olaso, Ivo Gut, Jean-Phillipe Collet, Gilles Montalescot, François Cambien
Software Mentions: 1
Published: over 16 years ago
10.1186/1741-7007-11-122
IpsA, a novel LacI-type regulator, is required for inositol-derived lipid formation in Corynebacteria and Mycobacteria
Cited by: 33
Author(s): Meike Baumgart, Kerstin Luder, Shipra Grover, Cornelia Gätgens, Gurdyal S. Besra, Julia Frunzke
Software Mentions: 1
Published: almost 11 years ago