bioconductor: limma | Projects | Ecosyste.ms: Papers

10.1155/2013/690415

Isolation of Small SSEA-4-Positive Putative Stem Cells from the Ovarian Surface Epithelium of Adult Human Ovaries by Two Different Methods
Cited by: 55
Author(s): Irma Virant‐Klun, Thomas Skutella, Matjaž Hren, Kristina Gruden, Branko Cvjetičanin, Andrej Vogler, Jasna Šinkovec
Software Mentions: 1
Published: over 12 years ago

10.18632/oncotarget.12130

RNF43 and ZNRF3 are commonly altered in serrated pathway colorectal tumorigenesis
Cited by: 77
Author(s): Catherine Bond, Diane McKeone, Murugan Kalimutho, Mark Bettington, Sally-Ann Pearson, Troy Dumenil, Leesa Wockner, Matthew Burge, Barbara A. Leggett, Vicki Whitehall
Software Mentions: 1
Published: almost 9 years ago

10.1186/1471-2164-9-298

The trypanosome transcriptome is remodelled during differentiation but displays limited responsiveness within life stages
Cited by: 91
Author(s): Vassiliki Lila Koumandou, Senthil Kumar Natesan, Tatiana Sergeenko, Mark C. Field
Software Mentions: 1
Published: about 17 years ago

10.1155/2020/2536272

Intracranial Infections in Neurological Surgery: The Changes of Circular RNA Expression and Their Possible Function Mechanism
Cited by: 3
Author(s): Jiangtao Niu, Hongqi Xu, Bo Yang
Software Mentions: 1
Published: about 5 years ago

10.1155/2020/5807295

A Support Vector Machine Model Predicting the Risk of Duodenal Cancer in Patients with Familial Adenomatous Polyposis at the Transcript Levels
Cited by: 0
Author(s): Weiqing Liu, Jian Dong, Shumin Ma, Liang Liu, Jun Yang
Software Mentions: 1
Published: about 5 years ago

10.1155/2019/2487921

Identification of Potential Transcriptional Biomarkers Differently Expressed in Both S. aureus- and E. coli-Induced Sepsis via Integrated Analysis
Cited by: 11
Author(s): Huan Chen, Ying Liu, Tao Li, Hui Sun, Chuyi Tan, Min Gao, Xing Wu, Xianzhong Xiao
Software Mentions: 1
Published: over 6 years ago

10.18632/oncotarget.12118

Somatic polyploidy is associated with the upregulation of c-MYC interacting genes and EMT-like signature
Cited by: 39
Author(s): Alejandro Vázquez-Martín, Olga V. Anatskaya, Alessandro Giuliani, Jekaterina Ērenpreisa, Sui Huang, Kristīne Salmiņa, Inna Inashkina, Anda Huna, Nikolay Nikolsky, Alexander E. Vinogradov
Software Mentions: 1
Published: almost 9 years ago

10.7150/ijms.47339

Integrated bioinformatics analysis for differentially expressed genes and signaling pathways identification in gastric cancer
Cited by: 3
Author(s): Chengli Yang, Aifeng Gong
Software Mentions: 1
Published: over 4 years ago

10.1155/2019/6480865

Identification of EGFR as a Novel Key Gene in Clear Cell Renal Cell Carcinoma (ccRCC) through Bioinformatics Analysis and Meta-Analysis
Cited by: 9
Author(s): Sheng Wang, Zhihong Yu, Kequn Chai
Software Mentions: 1
Published: over 6 years ago

10.1155/2020/4673153

Potential Prognostic Value and Mechanism of Stromal-Immune Signature in Tumor Microenvironment for Stomach Adenocarcinoma
Cited by: 8
Author(s): Xinying Zhu, Xing Xie, Qingchao Zhao, Lixian Zhang, Changjuan Li, Dongqiang Zhao
Software Mentions: 1
Published: about 5 years ago

10.1155/2021/5545312

Identification and Validation of Potential Biomarkers and Pathways for Idiopathic Pulmonary Fibrosis by Comprehensive Bioinformatics Analysis
Cited by: 3
Author(s): Weibin Qian, Xinrui Cai, Qi Qian, Xinying Zhang
Software Mentions: 1
Published: about 4 years ago

10.1155/2021/8844261

Functional lncRNA-miRNA-mRNA Networks in Response to Baicalein Treatment in Hepatocellular Carcinoma
Cited by: 5
Author(s): Xin Zhao, Dongyang Tang, Xiaofei Chen, Shaoqing Chen, Cheng Wang
Software Mentions: 1
Published: over 4 years ago

10.1155/2019/8308694

Bioinformatic Analysis of Circular RNA-Associated ceRNA Network Associated with Hepatocellular Carcinoma
Cited by: 25
Author(s): Jiacheng Wu, Lingling Shui, Yien Xiang, Xianzhi Qu, Ying Xie, Xuewen Zhang
Software Mentions: 1
Published: over 5 years ago

10.7150/ijms.45813

A Prognostic Model Based on the Immune-related Genes in Colon Adenocarcinoma
Cited by: 21
Author(s): Yuanlin Sun, Yang Zhang, Yuchen Guo, Zihao Yang, You Xu
Software Mentions: 1
Published: over 5 years ago

10.3892/ijmm.2014.1668

Identification of differentially expressed microRNAs in metastatic melanoma using next-generation sequencing technology
Cited by: 19
Author(s): Min Qi, Xiaoyuan Huang, Lei Zhou, Jianglin Zhang
Software Mentions: 1
Published: over 11 years ago

10.1038/ijo.2017.224

A history of obesity leaves an inflammatory fingerprint in liver and adipose tissue
Cited by: 48
Author(s): Ingrid P. Fischer, Martin Irmler, Christian Meyer, Stephan Sachs, Frauke Neff, Martin Hrabé de Angelis, Johannes Beckers, Matthias H. Tschöp, Susanna M. Hofmann, Siegfried Ussar
Software Mentions: 1
Published: almost 8 years ago

10.18632/oncotarget.13284

Specific micro-RNA expression patterns distinguish the basal and luminal subtypes of muscle-invasive bladder cancer
Cited by: 30
Author(s): Andrea Ochoa, Woonyoung Choi, Xiaoping Su, Arlene Siefker-Radtke, Bogdan Czerniak, Colin P. Dinney, David J. McConkey
Software Mentions: 1
Published: over 8 years ago

10.1155/2021/6402206

Autophagy-Related Genes in Atherosclerosis
Cited by: 4
Author(s): Yuankun Chen, Ao Zeng, Shumiao He, Siqing He, Chunmei Li, Wenjie Mei, Qun Lu
Software Mentions: 1
Published: about 4 years ago

10.1155/2018/4283673

Derivation and Validation of the Potential Core Genes in Pancreatic Cancer for Tumor-Stroma Crosstalk
Cited by: 13
Author(s): Ran Xue, Lin Hua, Wenbin Xu, Yan Gao, Yanbo Pang, Jianyu Hao
Software Mentions: 1
Published: over 6 years ago

10.1186/s13045-016-0273-2

iPSC-derived mesenchymal stromal cells are less supportive than primary MSCs for co-culture of hematopoietic progenitor cells
Cited by: 8
Author(s): Theresa Vasko, Joana Frobel, Richard K. Lubberich, Tamme W. Goecke, Wolfgang Wagner
Software Mentions: 1
Published: over 9 years ago

10.1155/2019/4012590

Inhibition of LOXL2 Enhances the Radiosensitivity of Castration-Resistant Prostate Cancer Cells Associated with the Reversal of the EMT Process
Cited by: 20
Author(s): Peng Xie, Hongliang Yu, Feijiang Wang, Feng Yan, Xia He
Software Mentions: 1
Published: over 6 years ago

10.1186/s13045-017-0531-y

The stem cell factor SALL4 is an essential transcriptional regulator in mixed lineage leukemia-rearranged leukemogenesis
Cited by: 28
Author(s): Lina Yang, Li Liu, Hong Gao, Jaya Pratap Pinnamaneni, Deepthi Sanagasetti, Vivek P. Singh, Kai Wang, Megumi Mathison, Qianzi Zhang, Ken Chen, Qianxing Mo, Todd K. Rosengart, Jianchang Yang
Software Mentions: 1
Published: almost 8 years ago

10.1186/s13045-018-0561-0

Artesunate shows potent anti-tumor activity in B-cell lymphoma
Cited by: 64
Author(s): Thea Kristin Våtsveen, Marit Renée Myhre, Chloé B. Steen, Sébastien Wälchli, Ole Christian Lingjærde, Baoyan Bai, Pierre Dillard, Theodossis A. Theodossiou, Toril Holien, Anders Sundan, Else Marit Inderberg, Erlend B. Smeland, June Helen Myklebust, Morten P. Oksvold
Software Mentions: 1
Published: over 7 years ago

10.1186/s13045-018-0694-1

Identifying and targeting cancer stem cells in leiomyosarcoma: prognostic impact and role to overcome secondary resistance to PI3K/mTOR inhibition
Cited by: 9
Author(s): Benjamin Fourneaux, Aurélien Bourdon, Bérengère Dadone, Carlo Lucchesi, Scott R. Daigle, Élodie Richard, Audrey Laroche-Clary, François Le Loarer, Antoîne Italiano
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-12-216

Common and unique elements of the ABA-regulated transcriptome of Arabidopsis guard cells
Cited by: 161
Author(s): Rui-Sheng Wang, Sona Pandey, Li Song, Timothy E. Gookin, Zhixin Zhao, Réka Albert, Sarah M. Assmann
Software Mentions: 1
Published: about 14 years ago

10.1155/2018/7342472

Integration of Genome-Wide DNA Methylation and Transcription Uncovered Aberrant Methylation-Regulated Genes and Pathways in the Peripheral Blood Mononuclear Cells of Systemic Sclerosis
Cited by: 19
Author(s): Honglin Zhu, Chengsong Zhu, Wentao Mi, Tao Chen, Hongjun Zhao, Xiaoxia Zuo, Hui Luo, Quan Zhen Li
Software Mentions: 1
Published: almost 7 years ago

10.1007/s10637-020-00952-z

Integrative analysis of key candidate genes and signaling pathways in autoimmune thyroid dysfunction related to anti-CTLA-4 therapy by bioinformatics
Cited by: 1
Author(s): Ying Zhang, Francesca Garofano, Xiaolong Wu, Matthias Schmid, Peter Krawitz, Markus Essler, Ingo G. H. Schmidt‐Wolf
Software Mentions: 1
Published: about 5 years ago

10.22037/ijpr.2020.113442.14305

Identification of Candidate Biomarkers for Idiopathic Thrombocytopenic Purpura by Bioinformatics Analysis of Microarray Data.
Cited by: 0
Author(s): Samira Gilanchi, Hakimeh Zali, Mohammad Faranoush, Mostafa Rezaei Tavirani, Keyvan Shahriary, Mahyar Daskareh
Software Mentions: 1
Published: over 5 years ago

10.1080/19382014.2016.1182276

Insights into islet development and biology through characterization of a human iPSC-derived endocrine pancreas model
Cited by: 19
Author(s): Martijn van de Bunt, Majlinda Lako, Amy Barrett, Anna L. Gloyn, Mattias Hansson, Mark I. McCarthy, Nicola L. Beer, Christian Honoré
Software Mentions: 1
Published: over 9 years ago

10.1186/s13052-018-0575-9

Genomics of neonatal sepsis: has-miR-150 targeting BCL11B functions in disease progression
Cited by: 17
Author(s): Li Huang, Lixing Qiao, Huan Zhu, Li Jiang, Yin Li
Software Mentions: 1
Published: over 6 years ago

10.1155/2019/8340573

Network Analyses of Differentially Expressed Genes in Osteoarthritis to Identify Hub Genes
Cited by: 13
Author(s): Zhaoyan Li, Lei Zhong, Zhenwu Du, Gaoyang Chen, Jing Shang, Qiwei Yang, Qingyu Wang, Yang Song, Guizhen Zhang
Software Mentions: 1
Published: over 6 years ago

10.18632/oncotarget.18285

Altered erythropoiesis and decreased number of erythrocytes in children with neuroblastoma
Cited by: 11
Author(s): Fabio Morandi, Sebastiano Barco, Sara Stigliani, Michela Croce, Luca Persico, Corrado Lagazio, Francesca Scuderi, Maria Luisa Belli, Mariapina Montera, Giuliana Cangemi, Sarah Pozzi, Valentina Rigo, Paola Scaruffi, Loredana Amoroso, Giovanni Erminio, Vito Pistoia, Silvano Ferrini, Maria Valeria Corrias
Software Mentions: 1
Published: about 8 years ago

10.1002/jsp2.1146

Transcriptional profiling of intervertebral disc in a post‐traumatic early degeneration organ culture model
Cited by: 4
Author(s): Shangbin Cui, Zhiyu Zhou, Xu Chen, Fuxin Wei, R. Geoff Richards, Mauro Alini, Sibylle Grad, Zhen Li
Software Mentions: 1
Published: over 4 years ago

10.1186/1755-8794-7-35

A systems biology approach to understand the pathophysiological mechanisms of cardiac pathological hypertrophy associated with rosiglitazone
Cited by: 18
Author(s): Lars Verschuren, Peter Y. Wielinga, Thomas Kelder, Marijana Radonjić, Kanita Salic, Robert Kleemann, Ben van Ommen, Teake Kooistra
Software Mentions: 1
Published: about 11 years ago

10.1186/s40425-019-0641-x

Oncolytic Maraba virus armed with tumor antigen boosts vaccine priming and reveals diverse therapeutic response patterns when combined with checkpoint blockade in ovarian cancer
Cited by: 38
Author(s): AJ Robert McGray, Ruea-Yea Huang, Sebastiano Battaglia, Cheryl Eppolito, Anthony Miliotto, Kyle B. Stephenson, Amit A. Lugade, Gill Webster, Brian D. Lichty, Mukund Seshadri, Danuta Kozbor, Kunle Odunsi
Software Mentions: 1
Published: about 6 years ago

10.1186/s12920-019-0566-8

Discovery of stroke-related blood biomarkers from gene expression network models
Cited by: 13
Author(s): Konstantinos Theofilatos, Aigli Korfiati, Seferina Mavroudi, Matthew C. Cowperthwaite, Max Shpak
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12920-020-00799-6

Comprehensive analysis of angiogenesis-related genes and pathways in early diabetic retinopathy
Cited by: 18
Author(s): Chufeng Gu, Thashi Lhamo, Chen Zou, Chuandi Zhou, Tong Su, Deji Draga, Da Luo, Zhi Zheng, Li Yin, Qinghua Qiu
Software Mentions: 1
Published: almost 5 years ago

10.1155/2018/6451298

LCK as a Potential Therapeutic Target for Acute Rejection after Kidney Transplantation: A Bioinformatics Clue
Cited by: 6
Author(s): Linpei Jia, Rufu Jia, Yinping Li, Xiaoxia Li, Qiang Jia, Hong‐Liang Zhang
Software Mentions: 1
Published: about 7 years ago

10.1155/2021/6661625

Identification of Immune-Related Prognostic Biomarkers Associated with HPV-Positive Head and Neck Squamous Cell Carcinoma
Cited by: 6
Author(s): Yifei Chen, Jin Nie, Xiangsheng Li, Tao Fan, Xiaowen Deng, Dan Liang, Gui‐Lin Song
Software Mentions: 1
Published: over 4 years ago

10.1155/2015/952184

Electroporated Antigen-Encoding mRNA Is Not a Danger Signal to Human Mature Monocyte-Derived Dendritic Cells
Cited by: 6
Author(s): Stefanie Hoyer, Kerstin F. Gerer, Isabell A. Pfeiffer, Sabrina Prommersberger, Sandra Höfflin, Tanushree Jaitly, Luca Beltrame, Duccio Cavalieri, Gerold Schuler, Julio Vera, Niels Schaft, Jan Dörrie
Software Mentions: 1
Published: over 10 years ago

10.18632/oncotarget.13610

Membrane-bound ICAM-1 contributes to the onset of proinvasive tumor stroma by controlling acto-myosin contractility in carcinoma-associated fibroblasts
Cited by: 15
Author(s): Stéphanie Bonan, Jean Albrengues, Eloïse M. Grasset, Sanya-Eduarda Kužet, Nicolas Nottet, Isabelle Bourget, Thomas Bertero, Bernard Mari, Guerríno Meneguzzi, Cédric Gaggioli
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.10949

Prognostic value of molecular events from negative surgical margin of non-small-cell lung cancer
Cited by: 7
Author(s): Bangrong Cao, Feng Li, Dongfang Lu, Yan Liu, Yu Liu, Shu Guo, Ning Han, Xiangyang Liu, Yousheng Mao, Jie He, Shujun Cheng, Yanning Gao, Kaitai Zhang
Software Mentions: 1
Published: almost 9 years ago

10.1093/infdis/jiy420

Impact of Zostavax Vaccination on T-Cell Accumulation and Cutaneous Gene Expression in the Skin of Older Humans After Varicella Zoster Virus Antigen–Specific Challenge
Cited by: 10
Author(s): Nayna Patel, Milica Vukmanovic‐Stejic, Mayte Suárez‐Fariñas, Emma S. Chambers, Daisy Sandhu, Judilyn Fuentes‐Duculan, Neil A. Mabbott, M.H.A. Rustin, James G. Krueger, Arne N. Akbar
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12920-020-0657-6

DNA hypermethylation associated with upregulated gene expression in prostate cancer demonstrates the diversity of epigenetic regulation
Cited by: 64
Author(s): Ieva Rauluševičiūtė, Finn Drabløs, Morten Rye
Software Mentions: 1
Published: over 5 years ago

10.18632/oncotarget.18255

Bromodomain inhibition shows antitumoral activity in mice and human luminal breast cancer
Cited by: 21
Author(s): Montserrat Pérez-Salvia, Laia Simó-Riudalbas, Pere Llinàs‐Arias, Laura M. Roa, Fernando Setién, Marta Soler, Manuel Castro de Moura, James E. Bradner, Eva González-Suárez, Cátia Moutinho, Manel Esteller
Software Mentions: 1
Published: about 8 years ago

10.1038/s41388-018-0277-1

Inhibition of GPR158 by microRNA-449a suppresses neural lineage of glioma stem/progenitor cells and correlates with higher glioma grades
Cited by: 20
Author(s): Ningning Li, Ying Zhang, Kastytis Šidlauskas, Matthew Ellis, Ivor H. Evans, Paul Frankel, Joanne Lau, Tedani El-Hassan, Loredana Guglielmi, Jessica Broni, Angela Richard-Loendt, Sebastian Brandner
Software Mentions: 1
Published: about 7 years ago

10.1038/s41388-018-0546-z

Regulation of human glioma cell migration, tumor growth, and stemness gene expression using a Lck targeted inhibitor
Cited by: 48
Author(s): John P. Zepecki, Kristin M. Snyder, Margot-Martinez Moreno, Eduardo Fajardo, András Fiser, Jennifer K. Ness, Atom Sarkar, Steven Toms, Nikos Tapinos
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41388-018-0577-5

Integrative network biology analysis identifies miR-508-3p as the determinant for the mesenchymal identity and a strong prognostic biomarker of ovarian cancer
Cited by: 36
Author(s): Linjie Zhao, Wei Wang, Lian Xu, Tao Yi, Xia Zhao, Yuquan Wei, Louis Vermeulen, Ajay Goel, Shengtao Zhou, Xin Wang
Software Mentions: 1
Published: over 6 years ago

10.18632/oncotarget.14004

Establishment and application of a novel patient-derived KIAA1549:BRAF-driven pediatric pilocytic astrocytoma model for preclinical drug testing
Cited by: 38
Author(s): Florian Selt, Juliane Hohloch, Thomas Hielscher, Felix Sahm, David Capper, Andrey Korshunov, Diren Usta, Sebastian Brabetz, Johannes Ridinger, Jonas Ecker, Ina Oehme, Jan Gronych, Viktoria Marquardt, David Pauck, Heidi Bächli, Charles D. Stiles, Andreas von Deimling, Marc Remke, Martin U. Schuhmann, Stefan M. Pfister, Tilman Brummer, David Jones, Olaf Witt, Till Milde
Software Mentions: 1
Published: over 8 years ago

10.1186/s12920-021-01087-7

Integrated bioinformatics analysis of core regulatory elements involved in keloid formation
Cited by: 4
Author(s): Chuying Li, Mei-Tong Jin, Yinli Luo, Zhehu Jin, Long-Quan Pi
Software Mentions: 1
Published: almost 4 years ago

10.1038/oncsis.2017.33

Cyclin-dependent kinase 7 is a therapeutic target in high-grade glioma
Cited by: 52
Author(s): Sameer A. Greenall, Yi Chieh Lim, Camilla B. Mitchell, Kathleen S. Ensbey, Brett W. Stringer, Alexander L. Wilding, Geraldine M. O’Neill, Kerrie L. McDonald, Daniel J. Gough, Bryan W. Day, Terrance G. Johns
Software Mentions: 1
Published: about 8 years ago

10.1038/s41389-018-0032-z

Efficacy of the highly selective focal adhesion kinase inhibitor BI 853520 in adenocarcinoma xenograft models is linked to a mesenchymal tumor phenotype
Cited by: 36
Author(s): Ulrich Hirt, Irene C. Waizenegger, Norbert Schweifer, Christian Haslinger, Daniel Gerlach, Jürgen Braunger, Ulrike Weyer-Czernilofsky, Heinz Stadtmüller, Ioannis Sapountzis, Gerd Bader, Andreas Zoephel, Bojan Bister, Anke Baum, Jens Quant, Norbert Kraut, Pilar Garin‐Chesa, Günther R. Adolf
Software Mentions: 1
Published: over 7 years ago

10.1289/ehp.9556

Up-regulation of Tissue Factor in Human Pulmonary Artery Endothelial Cells after Ultrafine Particle Exposure
Cited by: 59
Author(s): Edward D. Karoly, Zhuowei Li, Lisa A. Dailey, Xhevahire Hyseni, Yuh‐Chin T. Huang
Software Mentions: 1
Published: over 18 years ago

10.1289/ehp.11647

One-Month Diesel Exhaust Inhalation Produces Hypertensive Gene Expression Pattern in Healthy Rats
Cited by: 54
Author(s): Reddy R. Gottipolu, J. Grace Wallenborn, Edward D. Karoly, Mette C. Schladweiler, Allen D. Ledbetter, Todd Krantz, William P. Linak, Abraham Nyska, Johnny A. Johnson, Ronald F. Thomas, Judy E. Richards, Richard H. Jaskot, Urmila P. Kodavanti
Software Mentions: 1
Published: over 16 years ago

10.1007/s11356-019-05350-4

Correlation between pri-miR-124 (rs531564) polymorphism and congenital heart disease susceptibility in Chinese population at two different altitudes: a case-control and in silico study
Cited by: 10
Author(s): Wenke Yang, Kang Yi, Hongmiao Yu, Yunhan Ding, Dehong Li, Wei Ye, Tao You, Xiaodong Xie
Software Mentions: 1
Published: about 6 years ago

10.1080/15592294.2020.1788325

Epigenome-wide cross-tissue correlation of human bone and blood DNA methylation – can blood be used as a surrogate for bone?
Cited by: 17
Author(s): Parvaneh Ebrahimi, Holger Luthman, Fiona McGuigan, Kristina Åkesson
Software Mentions: 1
Published: about 5 years ago

10.1289/ehp.8419

Proteomic Evaluation of Neonatal Exposure to 2,2′,4,4′,5-Pentabromodiphenyl Ether
Cited by: 68
Author(s): Henrik Alm, Birger Scholz, Celia Fischer, Kim Kultima, Henrik Viberg, Per Eriksson, Lennart Dencker, Michael Stigson
Software Mentions: 1
Published: over 19 years ago

10.1080/15592294.2017.1367475

Variability of genome-wide DNA methylation and mRNA expression profiles in reproductive and endocrine disease related tissues
Cited by: 32
Author(s): Nilüfer Rahmioğlu, Alexander W. Drong, Helen Lockstone, Thomas T. Tapmeier, Karin Hellner, Merli Saare, Triin Laisk-Podar, Christine Dew, Emily Tough, George Nicholson, Maire Peters, Andrew P. Morris, Cecilia M. Lindgren, Christian M. Becker, Krina T. Zondervan
Software Mentions: 1
Published: almost 8 years ago

10.1186/s13072-019-0283-8

Aberrant methylation-mediated downregulation of lncRNA SSTR5-AS1 promotes progression and metastasis of laryngeal squamous cell carcinoma
Cited by: 30
Author(s): Baoshan Wang, Lei Zhao, Weiwei Chi, Huấn Cao, Weina Cui, Wenxia Meng
Software Mentions: 1
Published: about 6 years ago

10.1186/s12940-016-0202-4

Long-term outdoor air pollution and DNA methylation in circulating monocytes: results from the Multi-Ethnic Study of Atherosclerosis (MESA)
Cited by: 57
Author(s): C. Gloria, Yongmei Liu, James W. MacDonald, R. Graham Barr, Kathleen Donohue, Mark Hensley, Lifang Hou, Charles E. McCall, Lindsay M. Reynolds, David S. Siscovick, Joel D. Kaufman
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.14856

Integrative computational analysis of transcriptional and epigenetic alterations implicates DTX1 as a putative tumor suppressor gene in HNSCC
Cited by: 15
Author(s): Daria A. Gaykalova, Veronika Žižková, Theresa Guo, Ilse Tiscareno, Yingying Wei, Rajita Vatapalli, Patrick Hennessey, Julie Ahn, Ludmila Danilova, Zubair Khan, Justin A. Bishop, J. Silvio Gutkind, Wayne M. Koch, William H. Westra, Elana J. Fertig, Michael F. Ochs, Joseph A. Califano
Software Mentions: 1
Published: over 8 years ago

10.1080/2162402X.2017.1414129

Interleukin 7-expressing fibroblasts promote breast cancer growth through sustenance of tumor cell stemness
Cited by: 37
Author(s): Maximilian Boesch, Lucas Onder, Hung‐Wei Cheng, Mario Novković, Urs Mörbe, Sieghart Sopper, Guenther Gastl, Wolfram Jochum, Thomas Ruhstaller, Michael Knauer, Burkhard Ludewig
Software Mentions: 1
Published: over 7 years ago

10.1186/1476-069X-10-5

In utero exposure to butyl benzyl phthalate induces modifications in the morphology and the gene expression profile of the mammary gland: an experimental study in rats
Cited by: 49
Author(s): Raquel Moral, Julia Santucci-Pereira, Thomas J. Wang, Irma H. Russo, Coral A. Lamartiniere, José Russo
Software Mentions: 1
Published: over 14 years ago

10.1210/en.2014-1302

Repair-Related Activation of Hedgehog Signaling in Stromal Cells Promotes Intrahepatic Hypothyroidism
Cited by: 43
Author(s): Brittany N. Bohinc, Gregory A. Michelotti, Guanhua Xie, Herbert Pang, Ayako Suzuki, Cynthia D. Guy, Dawn Piercy, Leandi Krüger, Marzena Swiderska‐Syn, Mariana Verdelho Machado, Thiago A. Pereira, Ann Marie Zavacki, Manal F. Abdelmalek, Anna Mae Diehl
Software Mentions: 1
Published: over 10 years ago

10.1186/s12920-015-0103-3

Integrated genomics has identified a new AT/RT-like yet INI1-positive brain tumor subtype among primary pediatric embryonal tumors
Cited by: 14
Author(s): Donald Ming Tak Ho, Chuan Chi Shih, Muh Lii Liang, Chan Yen Tsai, Tsung Han Hsieh, Chin Han Tsai, Shih Chieh Lin, Ting Chang, Meng En Chao, Hsei Wei Wang, Tai-Tong Wong
Software Mentions: 1
Published: about 10 years ago

10.1530/ERC-13-0222

IL6 sensitizes prostate cancer to the antiproliferative effect of IFNα2 through IRF9
Cited by: 25
Author(s): Holger H.H. Erb, Regina V Langlechner, Patrizia Moser, Florian Handle, Tineke Casneuf, Karin Verstraeten, Bettina Schlick, Georg Schäfer, Brett M. Hall, Kate Sasser, Zoran Čulig, Frédéric R. Santer
Software Mentions: 1
Published: almost 12 years ago

10.1128/EC.00335-13

High-Throughput Chemical Screening for Antivirulence Developmental Phenotypes in Trypanosoma brucei
Cited by: 9
Author(s): Paula MacGregor, Alasdair Ivens, Steven Shave, Iain T. Collie, David W. Gray, Manfred Auer, Keith R. Matthews
Software Mentions: 1
Published: over 11 years ago

10.1002/ece3.1933

The transcriptomic basis of tissue‐ and nutrition‐dependent sexual dimorphism in the beetle Onthophagus taurus
Cited by: 17
Author(s): Cristina C. Ledón‐Rettig, Armin P. Moczek
Software Mentions: 1
Published: over 9 years ago

10.1002/ece3.1565

Scaling nitrogen and carbon interactions: what are the consequences of biological buffering?
Cited by: 4
Author(s): David J. Weston, Alistair Rogers, Timothy J. Tschaplinski, Lee E. Gunter, Sara Jawdy, Nancy L. Engle, Lindsey E. Heady, Gerald A. Tuskan, Stan D. Wullschleger
Software Mentions: 1
Published: about 10 years ago

10.1002/eji.201545789

Depletion of CD11c + cells in the CD11c.DTR model drives expansion of unique CD64 + Ly6C + monocytes that are poised to release TNF‐α
Cited by: 10
Author(s): S Sivakumaran, Stephen Henderson, Sophie Ward, Pedro M. Sousa, Teresa Manzo, Lei Zhang, Thomas Conlan, Terry K. Means, Maud d’Aveni, Olivier Hermine, Marie‐Thérèse Rubio, Ronjon Chakraverty, Clare Bennett
Software Mentions: 1
Published: over 9 years ago

10.1002/eji.201948151

Deoxyguanosine is a TLR7 agonist
Cited by: 17
Author(s): Tamara Davenne, Anne Bridgeman, Rachel E. Rigby, Jan Rehwinkel
Software Mentions: 1
Published: over 5 years ago

10.1186/s40001-014-0057-5

Construction of microRNA and transcription factor regulatory network based on gene expression data in cardiomyopathy
Cited by: 3
Author(s): Lei Wang, Jihua Hu, Haijian Xing, Mengjia Sun, Juanli Wang, Qiang Jin, Hua Yang
Software Mentions: 1
Published: almost 11 years ago

10.1186/1755-8794-6-41

Transcriptome signatures in Helicobacter pylori-infected mucosa identifies acidic mammalian chitinase loss as a corpus atrophy marker
Cited by: 49
Author(s): Intawat Nookaew, Kaisa Thorell, Kuntal Worah, Shugui Wang, Martin L. Hibberd, Henrik Sjövall, Sven Pettersson, Jens Nielsen, Samuel Lundin
Software Mentions: 1
Published: almost 12 years ago

10.1111/j.1460-9568.2011.07896.x

Differential gene expression in migratory streams of cortical interneurons
Cited by: 42
Author(s): Mary Antypa, Clare Faux, Gregor Eichele, John G. Parnavelas, William D. Andrews
Software Mentions: 1
Published: over 13 years ago

10.1155/2017/8753815

The Significant Pathways and Genes Underlying the Colon Cancer Treatment by the Traditional Chinese Medicine PHY906
Cited by: 8
Author(s): Ziyuan Su, Chunyuan Zhou, Shaoyou Qin, Erna Jia, Zhaofei Wu
Software Mentions: 1
Published: over 8 years ago

Projects: bioconductor: limma

Science Score: 78/100

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Papers Mentioning limma 7,776