10.1371/journal.pone.0188177

Long 3'UTR of Nurr1 mRNAs is targeted by miRNAs in mesencephalic dopamine neurons
Cited by: 12
Author(s): Luis Alberto Pereira, Roberto Munita, Mauricio González, Marı́a Estela Andrés
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0046243

Transcriptional Profiling of a Yeast Colony Provides New Insight into the Heterogeneity of Multicellular Fungal Communities
Cited by: 30
Author(s): Ana Traven, Amrei Jänicke, Paul F. Harrison, Angavai Swaminathan, Torsten Seemann, Traude H. Beilharz
Software Mentions: 1
Published: almost 14 years ago

10.3389/fgene.2021.663110

Identification of Metastasis-Associated MicroRNAs in Metastatic Melanoma by miRNA Expression Profile and Experimental Validation
Cited by: 5
Author(s): Yunshu Gao, Jiahua Xu, Hongwei Li, Yi Hu, Guanzhen Yu
Software Mentions: 1
Published: over 5 years ago

10.1186/s12885-021-08212-w

SNX10 and PTGDS are associated with the progression and prognosis of cervical squamous cell carcinoma
Cited by: 8
Author(s): Pinping Jiang, Ying Cao, Feng Gao, Wei Sun, Jinhui Liu, Ziyan Ma, Minhao Xie, Shilong Fu
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0220894

System analysis of cross-talk between nuclear receptors reveals an opposite regulation of the cell cycle by LXR and FXR in human HepaRG liver cells
Cited by: 12
Author(s): Leonore Wigger, Cristina Casals-Casas, Michaël Baruchet, Bao Khanh Trang, Sylvain Pradervand, Aurélien Naldi, Béatrice Desvergne
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0056632

Using Weakly Conserved Motifs Hidden in Secretion Signals to Identify Type-III Effectors from Bacterial Pathogen Genomes
Cited by: 34
Author(s): Xiaobao Dong, Yongjun Zhang, Ziding Zhang
Software Mentions: 1
Published: over 13 years ago

10.1155/2013/690415

Isolation of Small SSEA-4-Positive Putative Stem Cells from the Ovarian Surface Epithelium of Adult Human Ovaries by Two Different Methods
Cited by: 55
Author(s): Irma Virant‐Klun, Thomas Skutella, Matjaž Hren, Kristina Gruden, Branko Cvjetičanin, Andrej Vogler, Jasna Šinkovec
Software Mentions: 1
Published: over 13 years ago

10.18632/aging.103107

Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma
Cited by: 9
Author(s): Jinyu Zhu, Bufu Tang, Jie Li, Yueli Shi, Minjiang Chen, Xiuling Lv, Miaomiao Meng, Qiaoyou Weng, Nannan Zhang, Kai Fan, Min Xu, Jiansong Ji
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2407-9-321

Identification of Achaete-scute complex-like 1 (ASCL1) target genes and evaluation of DKK1 and TPH1 expression in pancreatic endocrine tumours
Cited by: 10
Author(s): Térèse Johansson, Gunnar Westin, Britt Skogseid
Software Mentions: 1
Published: almost 17 years ago

10.1186/s12885-020-07316-z

Interconnectivity between molecular subtypes and tumor stage in colorectal cancer
Cited by: 13
Author(s): Robert R.J. Coebergh van den Braak, Sanne ten Hoorn, Anieta M. Sieuwerts, Jurriaan B. Tuynman, Marcel Smid, Saskia M. Wilting, John W.M. Martens, Cornelis J.A. Punt, John A. Foekens, Jan Paul Medema, Jan N.M. IJzermans, Louis Vermeulen
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0194225

Combined use of protein biomarkers and network analysis unveils deregulated regulatory circuits in Duchenne muscular dystrophy
Cited by: 22
Author(s): Silvia Parolo, Luca Marchetti, Mario Lauria, Karla Misselbeck, Marie‐Pier Scott‐Boyer, Laura Caberlotto, Corrado Priami
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pgen.1000223

Variations in Stress Sensitivity and Genomic Expression in Diverse S. cerevisiae Isolates
Cited by: 181
Author(s): Daniel J. Kvitek, Jessica L. Will, Audrey P. Gasch
Software Mentions: 1
Published: almost 18 years ago

10.3389/fgene.2021.569318

A Signature of Autophagy-Related Long Non-coding RNA to Predict the Prognosis of Breast Cancer
Cited by: 10
Author(s): Xiaoping Li, Jishang Chen, Qihe Yu, Hui Huang, Zhuangsheng Liu, Chengxing Wang, Yuan He, Xin Zhang, Weiwen Li, Chao Li, Jinglin Zhao, Wansheng Long
Software Mentions: 1
Published: over 5 years ago

10.3389/fgene.2020.01030

Long Non-coding RNA AGAP2-AS1 Silencing Inhibits PDLIM5 Expression Impeding Prostate Cancer Progression via Up-Regulation of MicroRNA-195-5p
Cited by: 11
Author(s): Pingbo Xie, Mingsheng Liu, Fen Chen, Shuo Wu, Tao Shao, Wei Wang, Chen-Xiang Xu, Huijie Zhou
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12943-018-0849-2

Knockdown of long non-coding RNA NEAT1 inhibits glioma cell migration and invasion via modulation of SOX2 targeted by miR-132
Cited by: 157
Author(s): Ke Zhou, Chi Zhang, Hui Yao, Xuewen Zhang, Youxin Zhou, Yanjun Che, Yulun Huang
Software Mentions: 1
Published: about 8 years ago

10.1038/s41380-018-0043-3

Violent aggression predicted by multiple pre-adult environmental hits
Cited by: 20
Author(s): Marina Mitjans, Jan Seidel, Martin Begemann, Fabian Bockhop, Jorge Moya-Higueras, V. Bansal, Janina Wesolowski, Anna Seelbach, Manuel I. Ibáñez, Fatka Kovacevic, Oguzhan Duvar, Lourdes Fañanás, Hannah-Ulrike Wolf, Generós Ortet, Peter Zwanzger, Verena Klein, Ina Lange, A. Tänzer, Manuela Dudeck, Lars Penke, Ludger Tebartz van Elst, Robert A. Bittner, Richard Schmidmeier, Roland Freese, Rüdiger Müller-Isberner, Jens Wiltfang, Thomas Bliesener, Stefan Bonn, Luise Poustka, Jürgen Müller, Bárbara Arias, Hannelore Ehrenreich
Software Mentions: 1
Published: about 8 years ago

10.7717/peerj.9530

Analysis of prognostic genes in the tumor microenvironment of lung adenocarcinoma
Cited by: 19
Author(s): Zhanyu Xu, Mengli Zhao, Wenjie Chen, Kun Li, Fanglu Qin, Weiwei Xiang, Yu Sun, Jiangbo Wei, Liqiang Yuan, Shikang Li, Sheng-hua Lin
Software Mentions: 1
Published: about 6 years ago

10.1038/s41380-018-0086-5

Gut microbiota modulate neurobehavior through changes in brain insulin sensitivity and metabolism
Cited by: 153
Author(s): Marion Soto, Clémence Herzog, Julian Avila Pacheco, Shiho Fujisaka, Kevin Bullock, Clary B. Clish, C. Ronald Kahn
Software Mentions: 1
Published: about 8 years ago

10.1155/2020/2536272

Intracranial Infections in Neurological Surgery: The Changes of Circular RNA Expression and Their Possible Function Mechanism
Cited by: 3
Author(s): Jiangtao Niu, Hongqi Xu, Bo Yang
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers12092554

Metformin Suppresses Cancer Stem Cells through AMPK Activation and Inhibition of Protein Prenylation of the Mevalonate Pathway in Colorectal Cancer
Cited by: 29
Author(s): Yoojeong Seo, Jang-Hyun Kim, Soo Jung Park, Sung Chul Park, Jae Hee Cheon, Won Ho Kim, Tae Il Kim
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers12061645

Drugs Targeting Tumor-Initiating Cells Prolong Survival in a Post-Surgery, Post-Chemotherapy Ovarian Cancer Relapse Model
Cited by: 20
Author(s): Brittney S. Harrington, Miwako Ozaki, Michael W. Caminear, Lídia Hernandez, Elizabeth Jordan, Nicholas J Kalinowski, Ian S. Goldlust, Rajarshi Guha, Marc Ferrer, Craig J. Thomas, Jyoti Shetty, Bao Tran, Nathan Wong, Carrie D. House, Christina M. Annunziata
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers11040559

New Insights into the Implication of Epigenetic Alterations in the EMT of Triple Negative Breast Cancer
Cited by: 61
Author(s): Noura Khaled, Yannick Bidet
Software Mentions: 1
Published: over 7 years ago

10.1186/s12943-018-0911-0

EIF4A3-induced circular RNA MMP9 (circMMP9) acts as a sponge of miR-124 and promotes glioblastoma multiforme cell tumorigenesis
Cited by: 227
Author(s): Renjie Wang, Sai Zhang, Xuyi Chen, Nan Li, Jianwei Li, Ruichao Jia, Yuanqing Pan, Haiqian Liang
Software Mentions: 1
Published: over 7 years ago

10.1155/2020/5807295

A Support Vector Machine Model Predicting the Risk of Duodenal Cancer in Patients with Familial Adenomatous Polyposis at the Transcript Levels
Cited by: 0
Author(s): Weiqing Liu, Jian Dong, Shumin Ma, Liang Liu, Jun Yang
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21186858

Preventive Triple Gene Therapy Reduces the Negative Consequences of Ischemia-Induced Brain Injury after Modelling Stroke in a Rat
Cited by: 13
Author(s): Vage Markosyan, Zufar Z. Safiullov, Andrei Izmailov, Filip Fadeev, Mikhail Sokolov, M. S. Kuznetsov, Д. А. Трофимов, Evgeny Kim, Grayr Kundakchyan, Airat Gibadullin, И. И. Салафутдинов, Л. Ф. Нуруллин, Farid Vagizovich Bashirov, Р. Р. Исламов
Software Mentions: 1
Published: almost 6 years ago

10.1155/2019/2487921

Identification of Potential Transcriptional Biomarkers Differently Expressed in Both S. aureus- and E. coli-Induced Sepsis via Integrated Analysis
Cited by: 11
Author(s): Huan Chen, Ying Liu, Tao Li, Hui Sun, Chuyi Tan, Min Gao, Xing Wu, Xianzhong Xiao
Software Mentions: 1
Published: over 7 years ago

10.1155/2019/6480865

Identification of EGFR as a Novel Key Gene in Clear Cell Renal Cell Carcinoma (ccRCC) through Bioinformatics Analysis and Meta-Analysis
Cited by: 9
Author(s): Sheng Wang, Zhihong Yu, Kequn Chai
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2407-9-441

Transcribed-ultra conserved region expression is associated with outcome in high-risk neuroblastoma
Cited by: 95
Author(s): Paola Scaruffi, Sara Stigliani, Stefano Moretti, Simona Coco, Carla De Vecchi, Francesca Valdora, Alberto Garaventa, Stefano Bonassi, Gian Paolo Tonini
Software Mentions: 1
Published: over 16 years ago

10.1155/2020/4673153

Potential Prognostic Value and Mechanism of Stromal-Immune Signature in Tumor Microenvironment for Stomach Adenocarcinoma
Cited by: 8
Author(s): Xinying Zhu, Xing Xie, Qingchao Zhao, Lixian Zhang, Changjuan Li, Dongqiang Zhao
Software Mentions: 1
Published: about 6 years ago

10.3389/fgene.2018.00241

Gradual and Acute Temperature Rise Induces Crossing Endocrine, Metabolic, and Immunological Pathways in Maraena Whitefish (Coregonus maraena)
Cited by: 24
Author(s): Alexander Rebl, Marieke Verleih, Mareen Nipkow, Simone Altmann, Ralf Bochert, Tom Goldammer
Software Mentions: 1
Published: about 8 years ago

10.1080/21623945.2020.1795434

Integrative analyses of biomarkers and pathways for adipose tissue after bariatric surgery
Cited by: 17
Author(s): Yingshan Liu, Jing Jin, Yanshan Chen, Chuna Chen, Zhenguo Chen, Lingling Xu
Software Mentions: 1
Published: over 6 years ago

10.18632/oncotarget.21540

GFAPδ/GFAPα ratio directs astrocytoma gene expression towards a more malignant profile
Cited by: 18
Author(s): Oscar M. J. A. Stassen, Emma J. van Bodegraven, Fabrizio Giuliani, Martina Moeton, Regina Kanski, Jacqueline A. Sluijs, Miriam E. van Strien, Willem Kamphuis, Pierre A. Robe, Elly M. Hol
Software Mentions: 1
Published: almost 9 years ago

10.1186/1476-4598-13-216

Small nucleolar RNA 113–1 suppresses tumorigenesis in hepatocellular carcinoma
Cited by: 82
Author(s): Gang Xu, Fang Yang, Chen Ding, Lan‐Juan Zhao, Hao Ren, Ping Zhao, Wen Wang, Zhongtian Qi
Software Mentions: 1
Published: almost 12 years ago

10.1155/2021/5545312

Identification and Validation of Potential Biomarkers and Pathways for Idiopathic Pulmonary Fibrosis by Comprehensive Bioinformatics Analysis
Cited by: 3
Author(s): Weibin Qian, Xinrui Cai, Qi Qian, Xinying Zhang
Software Mentions: 1
Published: about 5 years ago

10.1155/2021/8844261

Functional lncRNA-miRNA-mRNA Networks in Response to Baicalein Treatment in Hepatocellular Carcinoma
Cited by: 5
Author(s): Xin Zhao, Dongyang Tang, Xiaofei Chen, Shaoqing Chen, Cheng Wang
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers11040587

Integrin α10, a Novel Therapeutic Target in Glioblastoma, Regulates Cell Migration, Proliferation, and Survival
Cited by: 23
Author(s): Matilda Munksgaard Thorén, Katarzyna Chmielarska Masoumi, Cecilia Krona, Xiaoli Huang, Soumi Kundu, Linnéa Schmidt, Karin Forsberg-Nilsson, Marcus F. Keep, Elisabet Englund, Sven Nelander, Bo Holmqvist, Evy Lundgren-Åkerlund
Software Mentions: 1
Published: over 7 years ago

10.1155/2019/8308694

Bioinformatic Analysis of Circular RNA-Associated ceRNA Network Associated with Hepatocellular Carcinoma
Cited by: 25
Author(s): Jiacheng Wu, Lingling Shui, Yien Xiang, Xianzhi Qu, Ying Xie, Xuewen Zhang
Software Mentions: 1
Published: almost 7 years ago

10.3390/cancers12123857

Proteomic Resistance Biomarkers for PI3K Inhibitor in Triple Negative Breast Cancer Patient-Derived Xenograft Models
Cited by: 7
Author(s): Zhanfang Guo, Tina Primeau, Jingqin Luo, Cynthia Zhang, Hua Sun, Jeremy Hoog, Feng Gao, Shixia Huang, Dean P. Edwards, Sherri R. Davies, Rebecca Aft, Ding Li, Matthew J. Ellis, Shunqiang Li, X. Cynthia
Software Mentions: 1
Published: over 5 years ago

10.1007/s00403-014-1476-4

The effect of two endogenous retinoids on the mRNA expression profile in human primary keratinocytes, focusing on genes causing autosomal recessive congenital ichthyosis
Cited by: 13
Author(s): Hans Törmä, Anders Bergström, G. Ghiasifarahani, Berit Berne
Software Mentions: 1
Published: about 12 years ago

10.3389/fgene.2020.580036

Effect of N6-Methyladenosine Regulators on Progression and Prognosis of Triple-Negative Breast Cancer
Cited by: 24
Author(s): Shanshan Wang, Xuan Zou, Yajie Chen, William C. Cho, Xiang Zhou
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21196988

Proteomics Analysis of Plasma Membrane Fractions of the Root, Leaf, and Flower of Rice
Cited by: 2
Author(s): Yukimoto Iwasaki, Takafumi Itoh, Yusuke Hagi, Sakura Matsuta, Aki Nishiyama, Genki Chaya, Yuki Kobayashi, Kotaro Miura, Setsuko Komatsu
Software Mentions: 1
Published: almost 6 years ago

10.7717/peerj.9120

Identifying hub genes of papillary thyroid carcinoma in the TCGA and GEO database using bioinformatics analysis
Cited by: 15
Author(s): Ying Wang, Xiaolian Zhang, Huilin Leng, Yin Wang, Weizhong Zeng, Congling Zhang
Software Mentions: 1
Published: about 6 years ago

10.1155/2018/4283673

Derivation and Validation of the Potential Core Genes in Pancreatic Cancer for Tumor-Stroma Crosstalk
Cited by: 13
Author(s): Ran Xue, Lin Hua, Wenbin Xu, Yan Gao, Yanbo Pang, Jianyu Hao
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2407-13-231

Age dependence of tumor genetics in unfavorable neuroblastoma: arrayCGH profiles of 34 consecutive cases, using a Swedish 25-year neuroblastoma cohort for validation
Cited by: 9
Author(s): Cihan Cetinkaya, Tommy Martinsson, Johanna Sandgren, Catarina Träger, Per Kogner, Jan P. Dumanski, Teresita Díaz de Ståhl, Fredrik Hedborg
Software Mentions: 1
Published: over 13 years ago

10.1155/2019/4012590

Inhibition of LOXL2 Enhances the Radiosensitivity of Castration-Resistant Prostate Cancer Cells Associated with the Reversal of the EMT Process
Cited by: 20
Author(s): Peng Xie, Hongliang Yu, Feijiang Wang, Feng Yan, Xia He
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.21621

Pediatric brain tumor cells release exosomes with a miRNA repertoire that differs from exosomes secreted by normal cells
Cited by: 39
Author(s): Ágota Tűzesi, Teresia Kling, Anna Wenger, Taral R. Lunavat, Su Chul Jang, Bertil Rydenhag, Jan Lötvall, Steven M. Pollard, Anna Danielsson, Helena Carén
Software Mentions: 1
Published: almost 9 years ago

10.18632/oncotarget.19743

lncRNA PVT1 and its splicing variant function as competing endogenous RNA to regulate clear cell renal cell carcinoma progression
Cited by: 56
Author(s): Tao Yang, Hui Zhou, Peijun Liu, Libin Yan, Weimin Yao, Ke Chen, Jin Zeng, Heng Li, Junhui Hu, Hua Xu, Zhangqun Ye
Software Mentions: 1
Published: about 9 years ago

10.1128/JVI.02828-14

Analysis of the Early Immune Response to Infection by Infectious Bursal Disease Virus in Chickens Differing in Their Resistance to the Disease
Cited by: 43
Author(s): Jacqueline Smith, Jean-Rémy Sadeyen, Colin Butter, Pete Kaiser, David W. Burt
Software Mentions: 1
Published: over 11 years ago

10.18632/oncotarget.20441

Crosstalk in competing endogenous RNA network reveals the complex molecular mechanism underlying lung cancer
Cited by: 45
Author(s): Xiang Jin, Yinghui Guan, Hui Sheng, Yang Liu
Software Mentions: 1
Published: almost 9 years ago

10.1155/2019/8340573

Network Analyses of Differentially Expressed Genes in Osteoarthritis to Identify Hub Genes
Cited by: 13
Author(s): Zhaoyan Li, Lei Zhong, Zhenwu Du, Gaoyang Chen, Jing Shang, Qiwei Yang, Qingyu Wang, Yang Song, Guizhen Zhang
Software Mentions: 1
Published: over 7 years ago

10.1155/2020/3280530

<i>MicroRNA-587</i> Functions as a Tumor Suppressor in Hepatocellular Carcinoma by Targeting Ribosomal Protein SA
Cited by: 8
Author(s): Miao Chen, Duo Wang, Junjie Liu, Ziyan Zhou, Zhanling Ding, Lianfeng Liu, Danke Su, Hang Li
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers4041212

dNTP Supply Gene Expression Patterns after P53 Loss
Cited by: 7
Author(s): Tomas Radivoyevitch, Yogen Saunthararajah, John J. Pink, Gina Ferris, Ian Lent, Mark W. Jackson, Damian J. Junk, Charles Kunos
Software Mentions: 1
Published: over 13 years ago

10.1155/2019/3629751

Integration of Gene Expression Profile Data to Verify Hub Genes of Patients with Stanford A Aortic Dissection
Cited by: 9
Author(s): Weitie Wang, Tiance Wang, Yong Wang, Hulin Piao, Bo Li, Zhicheng Zhu, Rihao Xu, Dan Li, Kexiang Liu
Software Mentions: 1
Published: about 7 years ago

10.1155/2016/7281732

Identification and Evolutionary Analysis of Potential Candidate Genes in a Human Eating Disorder
Cited by: 6
Author(s): Ubadah Sabbagh, Saman Mullegama, Gerald J. Wyckoff
Software Mentions: 1
Published: over 10 years ago

10.1186/1476-4598-9-283

Elimination of head and neck cancer initiating cells through targeting glucose regulated protein78 signaling
Cited by: 98
Author(s): Meng-Ju Wu, Chia Ing Jan, Yeou Guang Tsay, Yau Hua Yu, Chih Yang Huang, Shu Chun Lin, Chung Ji Liu, Yu Syuan Chen, Jeng‐Fan Lo, Cheng Chia Yu
Software Mentions: 1
Published: almost 16 years ago

10.3390/cancers13102401

A Novel Three-Gene Score as a Predictive Biomarker for Pathologically Complete Response after Neoadjuvant Chemotherapy in Triple-Negative Breast Cancer
Cited by: 12
Author(s): Masanori Oshi, Fernando A. Angarita, Yoshihisa Tokumaru, Li Yan, Ryusei Matsuyama, Itaru Endo, Kazuaki Takabe
Software Mentions: 1
Published: over 5 years ago

10.3390/jpm11020107

Potential Role of miRNAs in the Acquisition of Chemoresistance in Neuroblastoma
Cited by: 7
Author(s): Barbara Marengo, Alessandra Pulliero, Maria Valeria Corrias, Riccardo Leardi, Emanuele Farinini, Gilberto Fronza, Paola Menichini, Lorenzo Monteleone, Giulia Elda Valenti, Andrea Speciale, Patrizia Perri, Francesca Madia, Alberto Izzotti, Cinzia Domenicotti
Software Mentions: 1
Published: over 5 years ago

10.1186/s12885-016-2212-6

Dynamic modulation of phosphoprotein expression in ovarian cancer xenograft models
Cited by: 5
Author(s): Antonis Koussounadis, Simon P. Langdon, In Hwa Um, Charlene Kay, Kyle Francis, David J. Harrison, V. Anne Smith
Software Mentions: 1
Published: over 10 years ago

10.1111/acel.12229

Gene profiling reveals association between altered Wnt signaling and loss of T-cell potential with age in human hematopoietic stem cells
Cited by: 13
Author(s): Melissa Khoo, Stephen M. Carlin, Mark Lutherborrow, Vivek Jayaswal, D. F. David, John J. Moore
Software Mentions: 1
Published: about 12 years ago

10.1155/2020/5307641

SRCIN1 Regulated by circCCDC66/miR-211 Is Upregulated and Promotes Cell Proliferation in Non-Small-Cell Lung Cancer
Cited by: 8
Author(s): Weijun Hong, Suyun Yu, Yaqing Zhuang, Qingqing Zhang, Jiqin Wang, Xiwen Gao
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers11101473

Circular RNAs in Clear Cell Renal Cell Carcinoma: Their Microarray-Based Identification, Analytical Validation, and Potential Use in a Clinico-Genomic Model to Improve Prognostic Accuracy
Cited by: 33
Author(s): Antonia Franz, Bernhard Ralla, Sabine Weickmann, Monika Jung, Hannah Rochow, Carsten Stephan, Andreas Erbersdobler, Ergin Kilic, Annika Fendler, Klaus Jung
Software Mentions: 1
Published: almost 7 years ago

10.1186/1710-1492-10-32

Th17/Treg ratio derived using DNA methylation analysis is associated with the late phase asthmatic response
Cited by: 28
Author(s): Amrit Singh, Masatsugu Yamamoto, Jian Ruan, Jung‐Hye Choi, Gail M. Gauvreau, Sven Olek, Ulrich Hoffmueller, Christopher Carlsten, J. Mark FitzGerald, Louis‐Philippe Boulet, Paul M. O'Byrne, Scott J. Tebbutt
Software Mentions: 1
Published: about 12 years ago

10.1155/2014/498318

Development and Maturation of the Immune System in Preterm Neonates: Results from a Whole Genome Expression Study
Cited by: 13
Author(s): Magdalena Zasada, Przemko Kwinta, Wojciech Durlak, Mirosław Bik-Multanowski, Anna Madetko‐Talowska, Jacek J Pietrzyk
Software Mentions: 1
Published: over 12 years ago

10.1186/1476-4598-8-71

Meta-analysis of glioblastoma multiforme versus anaplastic astrocytoma identifies robust gene markers
Cited by: 56
Author(s): Jonathan M. Dreyfuss, Mark D. Johnson, Peter J. Park
Software Mentions: 1
Published: almost 17 years ago

10.1038/s41380-018-0258-3

Integrative approach to sporadic Alzheimer’s disease: deficiency of TYROBP in a tauopathy mouse model reduces C1q and normalizes clinical phenotype while increasing spread and state of phosphorylation of tau
Cited by: 43
Author(s): Mickaël Audrain, Jean‐Vianney Haure‐Mirande, Minghui Wang, Soong Ho Kim, Tomas Fanutza, Paramita Chakrabarty, Paul E. Fraser, Peter St George-Hyslop, Todd E. Golde, Robert D. Blitzer, Eric E. Schadt, Bin Zhang, Michelle E. Ehrlich, Sam Gandy
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijms21217812

Circular RNAs and Their Linear Transcripts as Diagnostic and Prognostic Tissue Biomarkers in Prostate Cancer after Prostatectomy in Combination with Clinicopathological Factors
Cited by: 6
Author(s): Hannah Rochow, Monika Jung, Sabine Weickmann, Bernhard Ralla, Carsten Stephan, Sefer Elezkurtaj, Ergin Kilic, Zhao Zhi, Klaus Jung, Annika Fendler, Antonia Franz
Software Mentions: 1
Published: almost 6 years ago

10.1186/1471-2407-10-262

High-throughput miRNA profiling of human melanoma blood samples
Cited by: 143
Author(s): Petra Leidinger, Andreas Keller, Anne Borries, Jörg Reichrath, Knuth Rass, Sven Jäger, Hans‐Peter Lenhof, Eckart Meese
Software Mentions: 1
Published: about 16 years ago

10.1186/s12885-017-3114-y

Effect of myeloid differentiation primary response gene 88 on expression profiles of genes during the development and progression of Helicobacter-induced gastric cancer
Cited by: 19
Author(s): Ivonne Lozano‐Pope, Arnika Sharma, Michael Matthias, Kelly S. Doran, Marygorret Obonyo
Software Mentions: 1
Published: over 9 years ago

10.18632/oncotarget.21929

Proteome profiling of clear cell renal cell carcinoma in von Hippel-Lindau patients highlights upregulation of Xaa-Pro aminopeptidase-1, an anti-proliferative and anti-migratory exoprotease
Cited by: 13
Author(s): Vanessa Drendel, Bianca Heckelmann, Chia-Yi Chen, Juliane Weißer, Guadalupe Espadas, Christoph Schell, Eduard Sabidò, Martin Werner, Cordula A. Jilg, Oliver Schilling
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12943-019-1072-5

Circ-AKT3 inhibits clear cell renal cell carcinoma metastasis via altering miR-296-3p/E-cadherin signals
Cited by: 112
Author(s): Dingwei Xue, Huan Wang, Yuanlei Chen, Danyang Shen, Jinmei Lu, Mingchao Wang, Abudureheman Zebibula, Liwei Xu, Haiyang Wu, Gonghui Li, Liqun Xia
Software Mentions: 1
Published: almost 7 years ago

10.1155/2015/760698

Profiling of Selected MicroRNAs in Proliferative Eutopic Endometrium of Women with Ovarian Endometriosis
Cited by: 36
Author(s): Piotr Laudański, Radosław Charkiewicz, Agnieszka Tołwińska, Jacek Szamatowicz, Angelika Edyta Charkiewicz, Jacek Nikliński
Software Mentions: 1
Published: over 11 years ago

10.18632/oncotarget.21132

Characterization of epithelial-mesenchymal transition intermediate/hybrid phenotypes associated to resistance to EGFR inhibitors in non-small cell lung cancer cell lines
Cited by: 41
Author(s): Valentina Fustaino, Dario Presutti, Teresa Colombo, Beatrice Cardinali, Giuliana Papoff, Rossella Brandi, Paola Bertolazzi, G. Felici, Giovina Ruberti
Software Mentions: 1
Published: almost 9 years ago

10.3390/cancers13164225

Tobacco Smoke and Electronic Cigarette Vapor Alter Enhancer RNA Expression That Can Regulate the Pathogenesis of Lung Squamous Cell Carcinoma
Cited by: 2
Author(s): Joseph C. Tsai, Omar A. Saad, Shruti Magesh, Jingyue Xu, Abby C Lee, Wei Tse Li, Jaideep Chakladar, Mark M. Fuster, Eric Y. Chang, Jessica Wang‐Rodriguez, Weg M. Ongkeko
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms21228479

Establishment of a Gene Signature to Predict Prognosis for Patients with Lung Adenocarcinoma
Cited by: 17
Author(s): Zhaodong Li, Fanghua Qi, Fan Li
Software Mentions: 1
Published: almost 6 years ago

10.1111/mpp.12564

A spatial temporal analysis of the <i>Fusarium graminearum</i> transcriptome during symptomless and symptomatic wheat infection
Cited by: 56
Author(s): Neil Andrew Brown, J. Evans, Andrew Mead, K. E. Hammond‐Kosack
Software Mentions: 1
Published: about 9 years ago

10.1155/2020/5637864

Mining miRNAs’ Expressions in Glioma Based on GEO Database and Their Effects on Biological Functions
Cited by: 2
Author(s): Ké Li, Qi Zhang, Duan Niu, Hailong Xing
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12896-015-0218-9

Transcriptome study and identification of potential marker genes related to the stable expression of recombinant proteins in CHO clones
Cited by: 9
Author(s): Uroš Jamnikar, Petra Nikolić, Aleš Belič, Marjanca Blas, Dominik Gaser, Andrej Francky, Holger Laux, Andrej Blejec, Špela Baebler, Kristina Gruden
Software Mentions: 1
Published: almost 11 years ago

10.3390/ijms21228759

Phylostratic Shift of Whole-Genome Duplications in Normal Mammalian Tissues towards Unicellularity Is Driven by Developmental Bivalent Genes and Reveals a Link to Cancer
Cited by: 27
Author(s): Olga V. Anatskaya, Alexander E. Vinogradov, Ninel M. Vainshelbaum, Alessandro Giuliani, Jekaterina Ērenpreisa
Software Mentions: 1
Published: over 5 years ago

10.1155/2020/7283581

Identification of Key Genes of Human Advanced Diabetic Nephropathy Independent of Proteinuria by Transcriptome Analysis
Cited by: 3
Author(s): Fei Cai, Xu‐jie Zhou, Yan Jia, Weijian Yao, Jicheng Lv, Gang Liu, Li Yang
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.5363

Profile and clinical implication of circular RNAs in human papillary thyroid carcinoma
Cited by: 22
Author(s): Huihui Ren, Zhelong Liu, Siyue Liu, Xinrong Zhou, Hong Wang, Jinchao Xu, Daowen Wang, Gang Yuan
Software Mentions: 1
Published: about 8 years ago

10.3389/fgene.2020.563882

Identification of a Twelve-Gene Signature and Establishment of a Prognostic Nomogram Predicting Overall Survival for Medulloblastoma
Cited by: 6
Author(s): Sihan Zhu, Fei Lin, Zhenghe Chen, Xiaobing Jiang, Zhang Ji, Qiulan Yang, Yinsheng Chen, Jian Wang
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers11101536

Understanding the Interplay between COX-2 and hTERT in Colorectal Cancer Using a Multi-Omics Analysis
Cited by: 24
Author(s): Georgios D. Ayiomamitis, George Notas, Thivi Vasilakaki, Aikaterini Tsavari, Styliani Vederaki, T. Theodosopoulos, Elias Kouroumalis, Apostolos Zaravinos
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pcbi.1002486

Microarray Analysis of LTR Retrotransposon Silencing Identifies Hdac1 as a Regulator of Retrotransposon Expression in Mouse Embryonic Stem Cells
Cited by: 57
Author(s): Judith Reichmann, James H Crichton, M Madej, Mary Taggart, Philippe Gautier, José L. García‐Pérez, Richard R. Meehan, Ian R. Adams
Software Mentions: 1
Published: over 14 years ago

10.1002/1878-0261.12444

Obesity‐induced <scp>MBD</scp> 2_v2 expression promotes tumor‐initiating triple‐negative breast cancer stem cells
Cited by: 23
Author(s): Emily A. Teslow, Cristina Mitrea, Bin Bao, Ramzi M. Mohammad, Lisa Polin, Greg Dyson, Kristen Purrington, Aliccia Bollig‐Fischer
Software Mentions: 1
Published: over 7 years ago

10.1186/1476-4598-13-159

Downregulation of deoxycytidine kinase in cytarabine-resistant mantle cell lymphoma cells confers cross-resistance to nucleoside analogs gemcitabine, fludarabine and cladribine, but not to other classes of anti-lymphoma agents
Cited by: 29
Author(s): Magdalena Klánová, Lucie Lorková, Ondřej Vít, Bokang Calvin Lenyeletse Maswabi, Jan Molinský, Jana Pospisilova, Petra Vočková, Cory Mavis, Lucie Latečková, Vojtěch Kulvait, Dana Vejmelkova, Radek Jakša, Francisco Hernandez, Marek Trněný, Martin Vokurka, Jir̆ı́ Petrák, Pavel Klener
Software Mentions: 1
Published: about 12 years ago

10.1186/1476-4598-12-63

Regulation of protumorigenic pathways by Insulin like growth factor binding protein2 and its association along with β-catenin in breast cancer lymph node metastasis
Cited by: 24
Author(s): Priyanka Sehgal, Neeraj Kumar, Varuvar Rajesh Praveen Kumar, Shilpa Patil, Animesh Bhattacharya, Manavalan Vijaya Kumar, Geetashree Mukherjee, Paturu Kondaiah
Software Mentions: 1
Published: about 13 years ago

10.1155/2020/1840415

Identification, Validation, and Functional Annotations of Genome-Wide Profile Variation between Melanocytic Nevus and Malignant Melanoma
Cited by: 6
Author(s): Wei Han, Wenhao Xu, Jianxiong Wang, Jia-Min Hou, Hai-Liang Zhang, Xiaoyu Zhao, Ge Shen
Software Mentions: 1
Published: almost 6 years ago

10.1186/1741-7007-11-93

Gene-environment and protein-degradation signatures characterize genomic and phenotypic diversity in wild Caenorhabditis eleganspopulations
Cited by: 54
Author(s): Rita J. M. Volkers, L. Basten Snoek, Caspara J van Hellenberg Hubar, Renata Coopman, Wei Chen, Wentao Yang, Mark G. Sterken, Hinrich Schulenburg, Bart P. Braeckman, J.E. Kammenga
Software Mentions: 1
Published: about 13 years ago

10.3390/cancers12071824

DrugSniper, a Tool to Exploit Loss-Of-Function Screens, Identifies CREBBP as a Predictive Biomarker of VOLASERTIB in Small Cell Lung Carcinoma (SCLC)
Cited by: 6
Author(s): Fernando Carazo, Cristina Bértolo, Carlos Castilla, Xabier Cendoya, Lucía Campuzano, Diego Serrano, Marian Gimeno, Francisco J. Planes, Rubén Pı́o, Luis M. Montuenga, Ángel Rubio
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers12082075

The Roles of Imprinted SLC22A18 and SLC22A18AS Gene Overexpression Caused by Promoter CpG Island Hypomethylation as Diagnostic and Prognostic Biomarkers for Non-Small Cell Lung Cancer Patients
Cited by: 10
Author(s): José Francisco Noguera-Uclés, Laura Boyero, Ana Salinas, Juan Antonio Cordero Varela, Johana Cristina Benedetti, Reyes Bernabé, Amparo Sánchez-Gastaldo, Miriam Alonso, Luís Paz-Ares, Sonia Molina-Pinelo
Software Mentions: 1
Published: about 6 years ago

10.1002/1878-0261.12711

<i>Retracted:</i> Long non‐coding RNA PGM5‐AS1 promotes epithelial‐mesenchymal transition, invasion and metastasis of osteosarcoma cells by impairing miR‐140‐5p‐mediated FBN1 inhibition
Cited by: 25
Author(s): Wei Liu, Pengcheng Liu, Hang Gao, Xu Wang, Mingxia Yan
Software Mentions: 1
Published: about 6 years ago

10.1186/s12915-020-0743-4

The quail genome: insights into social behaviour, seasonal biology and infectious disease response
Cited by: 30
Author(s): Katrina M. Morris, Matthew Hindle, Simon Boitard, David W. Burt, Angela Danner, Lél Eöry, H. S. Forrest, David Gourichon, Jérôme Gros, LaDeana W. Hillier, Thierry Jaffredo, Hanane Khoury, Rusty Lansford, Christine Leterrier, A. S. I. Loudon, Andrew S. Mason, Simone Meddle, Francis Minvielle, Patrick Minx, Frédérique Pitel, J. Seiler, Tsuyoshi Shimmura, Chad Tomlinson, Alain Vignal, Robert G. Webster, Takashi Yoshimura, Wesley C. Warren, Jacqueline Smith
Software Mentions: 1
Published: over 6 years ago

10.3389/fgene.2020.575770

TMPRSS2 Correlated With Immune Infiltration Serves as a Prognostic Biomarker in Prostatic Adenocarcinoma: Implication for the COVID-2019
Cited by: 3
Author(s): Lianxiang Luo, Yi Zheng, Mingyue Li, Xinjie Lin, Xiaodi Li, Xiaoling Li, Liao Cui, Hui Luo
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers13010110

The Impact of Immunofunctional Phenotyping on the Malfunction of the Cancer Immunity Cycle in Breast Cancer
Cited by: 9
Author(s): Takashi Terauchi, Toshihiko Torigoe, Li Yan, Jing Huang, Hiroko Yamashita, Kazuaki Takabe
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21239051

Kisspeptin Influences the Reproductive Axis and Circulating Levels of microRNAs in Senegalese Sole
Cited by: 15
Author(s): Catarina C Oliveira, Elvira Fatsini, Ignacio Fernández, Catarina Anjos, François Chauvigné, Joan Cerdà, Robin Mjelle, Jorge M.O. Fernandes, Elsa Cabrita
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers12051324

An Integrated Genomic Strategy to Identify CHRNB4 as a Diagnostic/Prognostic Biomarker for Targeted Therapy in Head and Neck Cancer
Cited by: 1
Author(s): Yi Hsuan Chuang, Chia Hwa Lee, Chun Yuan Lin, Chia Lin Liu, Sing‐Han Huang, Jung Yu Lee, Yi Yuan Chiu, Jih Chin Lee, Jinn-Moon Yang
Software Mentions: 1
Published: about 6 years ago

10.1002/1878-0261.12834

A novel prognostic model based on four circulating miRNA in diffuse large B‐cell lymphoma: implications for the roles of MDSC and Th17 cells in lymphoma progression
Cited by: 20
Author(s): Rui Sun, Zhong Zheng, Li Wang, Shu Cheng, Qingqing Shi, Bin Qu, Di Fu, Christophe Lebœuf, Yan Zhao, Jing Ye, Anne Janin, Wei‐Li Zhao
Software Mentions: 1
Published: almost 6 years ago

10.1155/2018/9482726

Integration of Gene Expression Profile Data to Screen and Verify Hub Genes Involved in Osteoarthritis
Cited by: 20
Author(s): Zhaoyan Li, Qingyu Wang, Gaoyang Chen, Xin Li, Qiwei Yang, Zhenwu Du, Mingchun Ren, Yang Song, Guizhen Zhang
Software Mentions: 1
Published: about 8 years ago

10.1155/2017/8589347

Screening for Key Pathways Associated with the Development of Osteoporosis by Bioinformatics Analysis
Cited by: 2
Author(s): Yanqing Liu, Yueqiu Wang, Yanxia Zhang, Yong Li, Hongfei Xiang, Xiaojin Peng, Bohua Chen, Guyou Jia
Software Mentions: 1
Published: over 9 years ago

10.1186/1741-7007-10-3

Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines
Cited by: 65
Author(s): Qiyu Bao, Wei Huang, Bo Zhu, Xiaofang Zhong, Jianhua Guo, Na Zhao, Chunming Xu, Huakun Zhang, Jinjiang Pang, Fangpu Han, Liu B
Software Mentions: 1
Published: over 14 years ago