10.1038/s41598-017-07979-y

The miR-183 family cluster alters zinc homeostasis in benign prostate cells, organoids and prostate cancer xenografts
Cited by: 15
Author(s): Shweta Dambal, Bethany Baumann, Tara McCray, La Tanya Williams, Zachary Richards, Ryan Deaton, Gail S. Prins, Larisa Nonn
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-08209-1

Identification of competing endogenous RNAs of the tumor suppressor gene PTEN: A probabilistic approach
Cited by: 17
Author(s): Kourosh Zarringhalam, Yvonne Tay, Prajna R. Kulkarni, Assaf C. Bester, Pier Paolo Pandolfi, Rahul Kulkarni
Software Mentions: 1
Published: about 9 years ago

10.3390/ijms21186660

The brlA Gene Deletion Reveals That Patulin Biosynthesis Is Not Related to Conidiation in Penicillium expansum
Cited by: 7
Author(s): Chrystian Zetina-Serrano, Ophélie Rocher, Claire Naylies, Yannick Lippi, Isabelle P. Oswald, Sophie Lorber, Olivier Puel
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21186858

Preventive Triple Gene Therapy Reduces the Negative Consequences of Ischemia-Induced Brain Injury after Modelling Stroke in a Rat
Cited by: 13
Author(s): Vage Markosyan, Zufar Z. Safiullov, Andrei Izmailov, Filip Fadeev, Mikhail Sokolov, M. S. Kuznetsov, Д. А. Трофимов, Evgeny Kim, Grayr Kundakchyan, Airat Gibadullin, И. И. Салафутдинов, Л. Ф. Нуруллин, Farid Vagizovich Bashirov, Р. Р. Исламов
Software Mentions: 1
Published: almost 6 years ago

10.1155/2020/1615826

MFGE8, ALB, APOB, APOE, SAA1, A2M, and C3 as Novel Biomarkers for Stress Cardiomyopathy
Cited by: 8
Author(s): Xiaoyu Pan, Zai-Wei Zhang
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-017-09207-z

The atopic dermatitis blood signature is characterized by increases in inflammatory and cardiovascular risk proteins
Cited by: 167
Author(s): Patrick M. Brunner, Mayte Suárez‐Fariñas, Helen He, Kunal Malik, Huei‐Chi Wen, Juana Gonzalez, Teh Sheng Chan, Yeriel Estrada, Xiuzhong Zheng, Saakshi Khattri, Annunziata Dattola, James G. Krueger, Emma Guttman‐Yassky
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-09353-4

Integrated analysis of mRNA and miRNA expression in HeLa cells expressing low levels of Nucleolin
Cited by: 22
Author(s): Sanjeev Kumar, Elizabhet Cruz Gomez, Mounira Chalabi-Dchar, Rong Cong, Sadhan Das, Iva Ugrinova, Xavier Gaume, Karine Monier, Fabien Mongélard, Philippe Bouvet
Software Mentions: 1
Published: about 9 years ago

10.3390/microarrays3040263

Expression Comparison of Oil Biosynthesis Genes in Oil Palm Mesocarp Tissue Using Custom Array
Cited by: 12
Author(s): Yick Ching Wong, Qi Bin Kwong, Heng Leng Lee, Chuang Kee Ong, Sean Mayes, Fook Tim Chew, David R. Appleton, Harikrishna Kulaveerasingam
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-017-10167-7

MicroRNA profile for health risk assessment: Environmental exposure to persistent organic pollutants strongly affects the human blood microRNA machinery
Cited by: 45
Author(s): Julian Krauskopf, Theo M. de Kok, Dennie G. A. J. Hebels, Ingvar A. Bergdahl, Anders Johansson, Florentin Spaeth, Hannu Kiviranta, Panu Rantakokko, Soterios A. Kyrtopoulos, Jos Kleinjans
Software Mentions: 1
Published: about 9 years ago

10.3389/fncel.2017.00022

Microarray and qPCR Analyses of Wallerian Degeneration in Rat Sciatic Nerves
Cited by: 38
Author(s): Sheng Yi, Xin Tang, Jun Yu, Jie Liu, Fei Ding, Xiaosong Gu
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-10380-4

Early gestational maternal low-protein diet diminishes hepatic response to fasting in young adult male mice
Cited by: 2
Author(s): Noriko Sato, Katsuko Sudo, Masayo Mori, Chihiro Imai, Masaaki Muramatsu, Masahiro Sugimoto
Software Mentions: 1
Published: about 9 years ago

10.3389/fncel.2013.00216

Early gene expression changes in spinal cord from SOD1G93A Amyotrophic Lateral Sclerosis animal model
Cited by: 38
Author(s): Gilson Pereira de Oliveira, Chrystian Junqueira Alves, Gerson Chadi
Software Mentions: 1
Published: over 13 years ago

10.3389/fncel.2013.00207

Impaired rRNA synthesis triggers homeostatic responses in hippocampal neurons
Cited by: 28
Author(s): Anna Kiryk, Katharina Sowodniok, Grzegorz Kreiner, Jan Rodriguez Parkitna, Aynur Sönmez, Tomasz Górkiewicz, Holger Bierhoff, Marcin Wawrzyniak, Artur Janusz, Birgit Liss, Witold Konopka, Günther Schütz, Leszek Kaczmarek, Rosanna Parlato
Software Mentions: 1
Published: over 13 years ago

10.1038/s41598-017-10803-2

Perinatal Malnutrition Leads to Sexually Dimorphic Behavioral Responses with Associated Epigenetic Changes in the Mouse Brain
Cited by: 19
Author(s): Daniel Nätt, Riccardo Barchiesi, Josef Murad, Jian Feng, Eric J. Nestler, Frances A. Champagne, Annika Thorsell
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-11248-3

MicroRNA-196b inhibits late apoptosis of pancreatic cancer cells by targeting CADM1
Cited by: 17
Author(s): Hongling Wang, Rui Zhou, Jing Liu, Ying Chang, Liu Shi, Xiaobing Wang, Meifang Huang, Qiu Zhao
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-09753-6

Low level activity thresholds for changes in NMR biomarkers and genes in high risk subjects for Type 2 Diabetes
Cited by: 2
Author(s): Karl‐Heinz Herzig, Juhani Leppäluoto, Jari Jokelainen, Emmanuelle Meugnier, Sandra Pesenti, Harri Selänne, Kari Mäkelä, Riikka Ahola, Timo Jämsä, Hubert Vidal, Sirkka Keinänen‐Kiukaanniemi
Software Mentions: 1
Published: almost 9 years ago

10.3389/fncel.2017.00321

Human iPSC-Derived Cerebellar Neurons from a Patient with Ataxia-Telangiectasia Reveal Disrupted Gene Regulatory Networks
Cited by: 18
Author(s): Samuel Nayler, Joseph E. Powell, Darya Vanichkina, Othmar Korn, Christine A. Wells, Refik Kanjhan, Jian Sun, Ryan J. Taft, Martin F. Lavin, Ernst J. Wolvetang
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-11928-0

Differential expression and co-expression gene networks reveal candidate biomarkers of boar taint in non-castrated pigs
Cited by: 24
Author(s): Markus Drag, Ruta Skinkyté-Juskiené, Duy Ngoc, Lisette J. A. Kogelman, Haja N. Kadarmideen
Software Mentions: 1
Published: almost 9 years ago

10.3389/fcimb.2019.00426

Transcriptomic Changes of Piscirickettsia salmonis During Intracellular Growth in a Salmon Macrophage-Like Cell Line
Cited by: 25
Author(s): Alejandro Zúñiga, Pamela Aravena, Rodrigo Pulgar, Dante Travisany, Javiera Ortíz-Severín, Francisco P. Chávez, Alejandro Maass, Maurício González, Verónica Cambiazo
Software Mentions: 1
Published: over 6 years ago

10.3389/fcimb.2021.747135

Lipocalin 2 Is a Regulator During Macrophage Polarization Induced by Soluble Worm Antigens
Cited by: 2
Author(s): Hanyu Shen, Ziheng Wang, Ailong Huang, Dandan Zhu, Pingping Sun, Yinong Duan
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-017-13644-1

Minimal methylation classifier (MIMIC): A novel method for derivation and rapid diagnostic detection of disease-associated DNA methylation signatures
Cited by: 22
Author(s): Ed C. Schwalbe, Debbie Hicks, Gholamreza Rafiee, Matthew Bashton, Henning Gohlke, Amir Enshaei, Sandeep Potluri, Jessie Matthiesen, Michael Mather, Pim Taleongpong, Ria Chaston, Angela Silmon, Amalia De Curtis, Janet C. Lindsey, Stephen Crosier, Amanda Smith, Tobias Goschzik, François Doz, Stefan Rutkowski, Birgitta Lannering, Torsten Pietsch, Simon Bailey, Daniel Williamson, Steven C. Clifford
Software Mentions: 1
Published: almost 9 years ago

10.3389/fcimb.2021.693981

Transforming Growth Factor-β1 Promotes M1 Alveolar Macrophage Polarization in Acute Lung Injury by Up-Regulating DNMT1 to Mediate the microRNA-124/PELI1/IRF5 Axis
Cited by: 6
Author(s): Yongqi Wang, Xiaoqing Wang, Hong Zhang, Baohui Han, Yuanmei Ye, Mengjie Zhang, Yingbin Wang, Jianjun Xue, Chunai Wang
Software Mentions: 1
Published: about 5 years ago

10.1155/2019/8490707

Identification of Differentially Expressed Genes and Signaling Pathways in Acute Myocardial Infarction Based on Integrated Bioinformatics Analysis
Cited by: 31
Author(s): Da-qiu Chen, Xiuying Kong, Xuwei Shen, Maozhi Huang, J. P. Zheng, Jing Sun, Shuai Xu
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms21196988

Proteomics Analysis of Plasma Membrane Fractions of the Root, Leaf, and Flower of Rice
Cited by: 2
Author(s): Yukimoto Iwasaki, Takafumi Itoh, Yusuke Hagi, Sakura Matsuta, Aki Nishiyama, Genki Chaya, Yuki Kobayashi, Kotaro Miura, Setsuko Komatsu
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-017-14067-8

In-silico gene essentiality analysis of polyamine biosynthesis reveals APRT as a potential target in cancer
Cited by: 10
Author(s): Jon Pey, Edurne San José‐Eneriz, María C. Ochoa, Iñigo Apaolaza, Pedro de Atauri, Ángel Rubio, Xabier Cendoya, Estíbaliz Miranda, Leire Gárate, Marta Cascante, Arkaitz Carracedo, Xabier Agirre, Felipe Prósper, Francisco J. Planes
Software Mentions: 1
Published: almost 9 years ago

10.3389/fcimb.2019.00016

Phagocytosis of Aspergillus fumigatus by Human Bronchial Epithelial Cells Is Mediated by the Arp2/3 Complex and WIPF2
Cited by: 9
Author(s): Luka Culibrk, Carys A. Croft, Amreen Toor, Shu Yang, Gurpreet K. Singhera, Delbert R. Dorscheid, Margo M. Moore, Scott J. Tebbutt
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-69691-8

Survival differences and associated molecular signatures of DNMT3A-mutant acute myeloid leukemia patients
Cited by: 15
Author(s): Chris Lauber, Nádia Correia, Andreas Trumpp, Michael A. Rieger, Anna Dolnik, Lars Bullinger, Ingo Roeder, Michael Seifert
Software Mentions: 1
Published: about 6 years ago

10.3389/fcimb.2021.641413

Functional Polymorphisms in the p53 Pathway Genes on the Genetic Susceptibility to Zika Virus Teratogenesis
Cited by: 1
Author(s): João Luiz Ellera Gomes, Eduarda Sgarioni, Igor Araújo Vieira, Lucas Rosa Fraga, Patrícia Ashton‐Prolla, Ana Cláudia P. Terças-Tretell, Juliana H. da Silva, Bethânia F.R. Ribeiro, Marcial Francis Galera, Thalita M. de Oliveira, Maria Denise Fernandes Carvalho de Andrade, Isabella Fernandes Carvalho, Lavínia Schüler‐Faccini, Fernanda Sales Luiz Vianna
Software Mentions: 1
Published: about 5 years ago

10.1186/1475-2840-11-15

Global gene expression profiling displays a network of dysregulated genes in non-atherosclerotic arterial tissue from patients with type 2 diabetes
Cited by: 30
Author(s): Vibe Skov, Steen Knudsen, Malene Olesen, Morten Hartvig Hansen, Lars Melholt Rasmussen
Software Mentions: 1
Published: over 14 years ago

10.1007/s11306-016-1084-8

Integration of targeted metabolomics and transcriptomics identifies deregulation of phosphatidylcholine metabolism in Huntington’s disease peripheral blood samples
Cited by: 40
Author(s): Anastasios Mastrokolias, René Pool, Eleni Mina, Kristina Hettne, Erik van Duijn, Roos C. van der Mast, Gert-Jan van Ommen, Peter A.C. ’t Hoen, Cornelia Prehn, Jerzy Adamski, Willeke van Roon-Mom
Software Mentions: 1
Published: about 10 years ago

10.3389/fcimb.2020.00343

Influence of the MUC1 Cell Surface Mucin on Gastric Mucosal Gene Expression Profiles in Response to Helicobacter pylori Infection in Mice
Cited by: 5
Author(s): Yonghua Sheng, Garrett Z. Ng, Kim M. Summers, Alison L. Every, Gareth Price, Sumaira Z. Hasnain, Philip Sutton, Michael A. McGuckin
Software Mentions: 1
Published: about 6 years ago

10.3389/fcimb.2018.00087

The Use of CRISPR/Cas9 Gene Editing to Confirm Congenic Contaminations in Host-Pathogen Interaction Studies
Cited by: 2
Author(s): Jonathan Ferrand, Nathan P. Croft, Geneviève Pépin, Kerrilyn R. Diener, Di Wu, Niamh E. Mangan, John Pedersen, Mark A. Behlke, John D. Hayball, Anthony W. Purcell, Richard L. Ferrero, Michael P. Gantier
Software Mentions: 1
Published: over 8 years ago

10.3389/fcell.2021.644940

Identification and Analysis of An Epigenetically Regulated Five-lncRNA Signature Associated With Outcome and Chemotherapy Response in Ovarian Cancer
Cited by: 3
Author(s): Hao Yang, Lin Gao, Meiling Zhang, Ning Ning, Yan Wang, Di Wu, Xiaomei Li
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21217812

Circular RNAs and Their Linear Transcripts as Diagnostic and Prognostic Tissue Biomarkers in Prostate Cancer after Prostatectomy in Combination with Clinicopathological Factors
Cited by: 6
Author(s): Hannah Rochow, Monika Jung, Sabine Weickmann, Bernhard Ralla, Carsten Stephan, Sefer Elezkurtaj, Ergin Kilic, Zhao Zhi, Klaus Jung, Annika Fendler, Antonia Franz
Software Mentions: 1
Published: almost 6 years ago

10.3389/fcell.2021.655145

Bdh2 Deficiency Promotes Endoderm-Biased Early Differentiation of Mouse Embryonic Stem Cells
Cited by: 1
Author(s): Yuting Fu, Fangyuan Liu, Shuo Cao, Jia Zhang, Huizhi Wang, Baojiang Wu, Yongli Song, Shuguang Duo, Xihe Li, Siqin Bao
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-70687-7

Altered serum protein levels in frontotemporal dementia and amyotrophic lateral sclerosis indicate calcium and immunity dysregulation
Cited by: 22
Author(s): Jared S. Katzeff, Fiona Bright, Kitty Lo, Jillian J. Kril, Angela Connolly, Ben Crossett, Lars M. Ittner, Michael Kassiou, Clement T. Loy, John R. Hodges, Olivier Piguet, Matthew C. Kiernan, Glenda M. Halliday, Woojin Scott Kim
Software Mentions: 1
Published: about 6 years ago

10.1002/cam4.1180

A comprehensive genome-wide analysis of long noncoding RNA expression profile in hepatocellular carcinoma
Cited by: 81
Author(s): Hongxia Cui, Yunxing Zhang, Qiu‐Jie Zhang, Wen-Ming Chen, Haibo Zhao, Jun Liang
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-020-70832-2

Machine learning for RNA sequencing-based intrinsic subtyping of breast cancer
Cited by: 30
Author(s): Silvia Cascianelli, Ivan Molineris, Claudio Isella, Marco Masseroli, Enzo Medico
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21228479

Establishment of a Gene Signature to Predict Prognosis for Patients with Lung Adenocarcinoma
Cited by: 17
Author(s): Zhaodong Li, Fanghua Qi, Fan Li
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-71852-8

The synergistic interaction of thermal stress coupled with overstocking strongly modulates the transcriptomic activity and immune capacity of rainbow trout (Oncorhynchus mykiss)
Cited by: 16
Author(s): Alexander Rebl, Tomáš Korytář, Andreas Borchel, Ralf Bochert, Joanna Ewa Strzelczyk, Tom Goldammer, Marieke Verleih
Software Mentions: 1
Published: about 6 years ago

10.3389/fcell.2021.656554

lncRNA Profiles Enable Prognosis Prediction and Subtyping for Esophageal Squamous Cell Carcinoma
Cited by: 9
Author(s): Shujun Zhang, Juan Li, Hongtao Gao, Yao Tong, Peilong Li, Yunshan Wang, Du Li, Chuanxin Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.688970

CircITGA7 Suppresses Gastric Cancer Progression Through miR-1471/MTDH Axis
Cited by: 2
Author(s): Haifeng Jin, Zheng Wu, Bibo Tan, Zhen Liu, Binqian Zhang
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms21228759

Phylostratic Shift of Whole-Genome Duplications in Normal Mammalian Tissues towards Unicellularity Is Driven by Developmental Bivalent Genes and Reveals a Link to Cancer
Cited by: 27
Author(s): Olga V. Anatskaya, Alexander E. Vinogradov, Ninel M. Vainshelbaum, Alessandro Giuliani, Jekaterina Ērenpreisa
Software Mentions: 1
Published: almost 6 years ago

10.3390/metabo11080481

Autophagy Deficiency by Atg4B Loss Leads to Metabolomic Alterations in Mice
Cited by: 4
Author(s): Gemma G. Martínez-García, Raúl Fernández Pérez, Álvaro F. Fernández, Sylvère Durand, Guido Kroemer, Guillermo Mariño
Software Mentions: 1
Published: about 5 years ago

10.3390/metabo10070268

Metabolic Signatures of Tumor Responses to Doxorubicin Elucidated by Metabolic Profiling in Ovo
Cited by: 17
Author(s): Iman W Achkar, Sara Abdul Kader, Shaima S. Dib, Kulsoom Junejo, Salha Bujassoum Al‐Bader, Shahina Hayat, Aditya Bhagwat, Xavier Rousset, Yan Wang, Jean Viallet, Karsten Suhre, Anna Halama
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21239051

Kisspeptin Influences the Reproductive Axis and Circulating Levels of microRNAs in Senegalese Sole
Cited by: 15
Author(s): Catarina C Oliveira, Elvira Fatsini, Ignacio Fernández, Catarina Anjos, François Chauvigné, Joan Cerdà, Robin Mjelle, Jorge M.O. Fernandes, Elsa Cabrita
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-72955-y

Arabidopsis, tobacco, nightshade and elm take insect eggs as herbivore alarm and show similar transcriptomic alarm responses
Cited by: 14
Author(s): Tobias Lortzing, Reinhard Kunze, Anke Steppuhn, Monika Hilker, Tobias Lortzing
Software Mentions: 1
Published: almost 6 years ago

10.3390/metabo11040195

Metabolic Signature of Arrhythmogenic Cardiomyopathy
Cited by: 5
Author(s): Chiara Volani, Johannes Michael Rainer, Vinicius Veri Hernandes, Viviana Meraviglia, Peter P. Pramstaller, Sigurdur Smarason, Giulio Pompilio, Michela Casella, Elena Sommariva, Giuseppe Paglia, Alessandra Rossini
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.690796

Oncogenic Chromatin Modifier KAT2A Activates MCT1 to Drive the Glycolytic Process and Tumor Progression in Renal Cell Carcinoma
Cited by: 10
Author(s): Yuanyuan Guo, Beibei Liu, Yihan Liu, Wei Sun, Wuyue Gao, Shilong Mao, Li Chen
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2020.00827

Circular RNA circ-0016068 Promotes the Growth, Migration, and Invasion of Prostate Cancer Cells by Regulating the miR-330-3p/BMI-1 Axis as a Competing Endogenous RNA
Cited by: 29
Author(s): Qingyuan Li, Wei Wang, Min Zhang, Wenguo Sun, Wei Shi, Feng Li
Software Mentions: 1
Published: about 6 years ago

10.3389/fcell.2020.581863

Transcriptomic Data Analyses Reveal a Reprogramed Lipid Metabolism in HCV-Derived Hepatocellular Cancer
Cited by: 6
Author(s): Guoqing Liu, Guojun Liu, Xiangjun Cui, Ying Xu
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-72551-0

Identifying a nasal gene expression signature associated with hyperinflation and treatment response in severe COPD
Cited by: 2
Author(s): Alen Faiz, Kai Imkamp, Erica van der Wiel, Ilse M. Boudewijn, Gerard H. Koppelman, Corry‐Anke Brandsma, Huib A. M. Kerstjens, Wim Timens, Sebastiaan J. Vroegop, Henk Pasma, Wim Boersma, Pascal Wielders, Frank van den Elshout, Khaled Mansour, Katrina Steiling, Avrum Spira, Marc E. Lenburg, Irene H. Heijink, Dirkje S. Postma, Maarten van den Berge
Software Mentions: 1
Published: almost 6 years ago

10.3389/fcell.2020.593106

Modeling Poliovirus Infection Using Human Engineered Neural Tissue Enriched With Motor Neuron Derived From Embryonic Stem Cells
Cited by: 0
Author(s): Érika Cosset, Youssef Hibaoui, Sten Ilmjärv, Pierre‐Yves Dietrich, Caroline Tapparel, Karl‐Heinz Krause
Software Mentions: 1
Published: over 5 years ago

10.1186/s12933-016-0353-1

Insulin resistance, endothelial function, angiogenic factors and clinical outcome in non-diabetic patients with chest pain without myocardial perfusion defects
Cited by: 19
Author(s): Helena U. Westergren, Sara Svedlund, Remi A. Momo, Juuso Blomster, Karin Wåhlander, Erika Rehnström, Peter J. Greasley, Regina Fritsche‐Danielson, Jan Oscarsson, Li‐Ming Gan
Software Mentions: 1
Published: over 10 years ago

10.3389/fcell.2021.665514

The Interaction Analysis of SNP Variants and DNA Methylation Identifies Novel Methylated Pathogenesis Genes in Congenital Heart Diseases
Cited by: 3
Author(s): Jing Wang, Xiaoxun Ma, Qi Zhang, Yinghui Chen, Dan Wu, Pei Zhao, Yanshan Yu
Software Mentions: 1
Published: over 5 years ago

10.1002/cam4.4033

Regional and racial disparity in proximal gastric cancer survival outcomes 1996–2016: Results from SEER and China National Cancer Center database
Cited by: 10
Author(s): Lulu Zhao, Penghui Niu, Dongbing Zhao, Yingtai Chen
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.724172

Identification of Biomarkers for Cervical Cancer Radiotherapy Resistance Based on RNA Sequencing Data
Cited by: 7
Author(s): Yue Feng, Zhao Wang, Nan Yang, Sijia Liu, Jiazhuo Yan, Jiayu Song, Shanshan Yang, Yunyan Zhang
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2020.624764

Circular RNA CircNOLC1, Upregulated by NF-KappaB, Promotes the Progression of Prostate Cancer via miR-647/PAQR4 Axis
Cited by: 29
Author(s): Wenbin Chen, Shengren Cen, Xumin Zhou, Taowei Yang, Kuan-Hung Wu, Libin Zou, Junqi Luo, Chuanyin Li, Daojun Lv, Xiangming Mao
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.659260

BCAT1 Activates PI3K/AKT/mTOR Pathway and Contributes to the Angiogenesis and Tumorigenicity of Gastric Cancer
Cited by: 24
Author(s): Shunbin Xiong, Panpan Zhan, Lixin Sun, Yu Lan, Jun Li, Lichao Sun, Zhihua Yang, Yuliang Ran, Yihong Sun
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.669285

DCBLD2 Affects the Development of Colorectal Cancer via EMT and Angiogenesis and Modulates 5-FU Drug Resistance
Cited by: 10
Author(s): Ping Xie, Fuqiang Yuan, Ma-Sha Huang, Wei Zhang, Hong‐Hao Zhou, Xi Li, Zhao‐Qian Liu
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.696359

HFS-SLPEE: A Novel Hierarchical Feature Selection and Second Learning Probability Error Ensemble Model for Precision Cancer Diagnosis
Cited by: 3
Author(s): Yajie Meng, Min Jin
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2021.602529

Crtc1 Deficiency Causes Obesity Potentially via Regulating PPARγ Pathway in White Adipose
Cited by: 3
Author(s): Yimeng Hu, Jing Lv, Yu Fang, Qiang Luo, Yuan He, Lili Li, Min Fan, Zhihua Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.689533

Current Pharmacological Strategies for Duchenne Muscular Dystrophy
Cited by: 25
Author(s): Shanshan Yao, Zihao Chen, Yuanyuan Yu, Ning Zhang, Hewen Jiang, Ge Zhang, Zongkang Zhang, Bao-Ting Zhang
Software Mentions: 1
Published: about 5 years ago

10.1016/j.cell.2012.09.019

Quantitative Analysis of Fission Yeast Transcriptomes and Proteomes in Proliferating and Quiescent Cells
Cited by: 497
Author(s): Samuel Marguerat, Manuela Schmidt, Sandra Codlin, Wei Chen, Ruedi Aebersold, Jürg Bähler
Software Mentions: 1
Published: almost 14 years ago

10.3390/membranes11090674

Bioinformatic Analysis of ABCA1 Gene Expression in Smoking and Chronic Obstructive Pulmonary Disease
Cited by: 4
Author(s): Stanislav Kotlyarov, Anna Kotlyarova
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers13040894

Identification of TENM4 as a Novel Cancer Stem Cell-Associated Molecule and Potential Target in Triple Negative Breast Cancer
Cited by: 6
Author(s): Roberto Ruiu, Giuseppina Barutello, Maddalena Arigoni, Federica Riccardo, Laura Conti, Giulia Peppino, Laura Annaratone, Caterina Marchiò, Giulio Mengozzi, Raffaele Calogero, Federica Cavallo
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-77732-5

Spontaneous intake of essential oils after a negative postnatal experience has long-term effects on blood transcriptome in chickens
Cited by: 6
Author(s): Aline Foury, Anne Collin, Jean‐Christophe Helbling, Christine Leterrier, Marie‐Pierre Moisan, Laurence Guilloteau
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers13092145

Using Genomics Feature Selection Method in Radiomics Pipeline Improves Prognostication Performance in Locally Advanced Esophageal Squamous Cell Carcinoma—A Pilot Study
Cited by: 14
Author(s): Chenyi Xie, Yihuai Hu, Joshua W. K. Ho, Lujun Han, Hong Yang, Jing Wen, Ka-On Lam, Ian Yu‐Hong Wong, Simon Law, K.W. Chiu, Jianhua Fu, Varut Vardhanabhuti
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers12102726

LncRNA Profiling Reveals That the Deregulation of H19, WT1-AS, TCL6, and LEF1-AS1 Is Associated with Higher-Risk Myelodysplastic Syndrome
Cited by: 16
Author(s): Katarína Szikszai, Zdeněk Krejčík, Jǐŕı Kléma, Nikoleta Loudová, Andrea Hruštincová, Monika Beličková, Monika Hruba, Jitka Veselá, Viktor Stránecký, David Kundrát, Pavla Pecherková, Jaroslav Čermák, Anna Jonášová, Michaela Dostálová Merkerová
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-78207-3

Maternal proteomic profiling reveals alterations in lipid metabolism in late-onset fetal growth restriction
Cited by: 9
Author(s): Cristina Paulés, L. Youssef, J. Miranda, F. Crovetto, Josep Marı́a Estanyol, Guerau Fernández, F. Crispi, E. Gratacós
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers11091219

Hyper-Activation of STAT3 Sustains Progression of Non-Papillary Basal-Type Bladder Cancer via FOSL1 Regulome
Cited by: 24
Author(s): Luisa Benerini Gatta, Laura Melocchi, Mattia Bugatti, Francesco Missale, Silvia Lonardi, Benedetta Zanetti, Luca Cristinelli, Sandra Belotti, Claudio Simeone, Roberto Ronca, Elisabetta Grillo, Sara Licini, Debora Bresciani, Regina Tardanico, Szeman Ruby Chan, Emanuele Giurisato, Stefano Calza, William Vermi
Software Mentions: 1
Published: about 7 years ago

10.1007/s12032-021-01470-5

Identification BCL6 and miR-30 family associating with Ibrutinib resistance in activated B-cell-like diffuse large B-cell lymphoma
Cited by: 5
Author(s): Jiazheng Li, Yan Huang, Yun Zhang, Junping Wen, Yanxin Chen, Lingyan Wang, Peifang Jiang, Jianda Hu
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers13092128

Cancer Essential Genes Stratified Lung Adenocarcinoma Patients with Distinct Survival Outcomes and Identified a Subgroup from the Terminal Respiratory Unit Type with Different Proliferative Signatures in Multiple Cohorts
Cited by: 10
Author(s): Kuo Hao Ho, Tzu Wen Huang, Ann Jeng Liu, Chwen Ming Shih, Ku Chung Chen
Software Mentions: 1
Published: over 5 years ago

10.1155/2019/8645840

The Expression Profile of MicroRNAs in Small and Large Abdominal Aortic Aneurysms
Cited by: 13
Author(s): Václava Černá, Pavel Ostašov, Pavel Pitule, Jiří Moláček, Vladislav Třeška, Martin Pešta
Software Mentions: 1
Published: almost 7 years ago

10.3390/cancers6010179

A Pilot Study on the Potential of RNA-Associated to Urinary Vesicles as a Suitable Non-Invasive Source for Diagnostic Purposes in Bladder Cancer
Cited by: 51
Author(s): Amparo Cuéllar Pérez, Ana Loizaga, Raquel Arceo, Isabel Lacasa, Ainara Rabade, Kerman Zorroza, David Mosén-Ansorena, Esperanza González, Ana M. Aransay, Juan Manuel Falcón‐Pérez, M. Unda-Urzaiz, Félix Royo
Software Mentions: 1
Published: over 12 years ago

10.1097/MD.0000000000027058

Exploration of immune-related cells and ceRNA in squamous cell lung cancer
Cited by: 0
Author(s): Lijun Wang, Hao Wang, Ke Xu, Yehong Xu, Yong Wang, Wei Song, Zhihong Zhang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-79598-z

Blocking PDGF-CC signaling ameliorates multiple sclerosis-like neuroinflammation by inhibiting disruption of the blood–brain barrier
Cited by: 13
Author(s): Manuel Zeitelhofer, Milena Z. Adzemovic, Christine Moessinger, Christina Stefanitsch, Carina Strell, Lars Muhl, Lou Brundin, Linda Fredriksson, Tomas Olsson, Ulf Eriksson, Ingrid Nilsson
Software Mentions: 1
Published: over 5 years ago

10.1155/2021/3925136

Decreased Spp1 Expression in Acute Myocardial Infarction after Ischemia and Reperfusion Injury
Cited by: 4
Author(s): Ling Li, Jianghua Huang, Zongkai Zhao, Zheng Wen, Kang Li, Tiangang Ma, Lisui Zhang, Junmeng Zheng, Shi Liang
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers12051324

An Integrated Genomic Strategy to Identify CHRNB4 as a Diagnostic/Prognostic Biomarker for Targeted Therapy in Head and Neck Cancer
Cited by: 1
Author(s): Yi Hsuan Chuang, Chia Hwa Lee, Chun Yuan Lin, Chia Lin Liu, Sing‐Han Huang, Jung Yu Lee, Yi Yuan Chiu, Jih Chin Lee, Jinn-Moon Yang
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers13010110

The Impact of Immunofunctional Phenotyping on the Malfunction of the Cancer Immunity Cycle in Breast Cancer
Cited by: 9
Author(s): Takashi Terauchi, Toshihiko Torigoe, Li Yan, Jing Huang, Hiroko Yamashita, Kazuaki Takabe
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers12082075

The Roles of Imprinted SLC22A18 and SLC22A18AS Gene Overexpression Caused by Promoter CpG Island Hypomethylation as Diagnostic and Prognostic Biomarkers for Non-Small Cell Lung Cancer Patients
Cited by: 10
Author(s): José Francisco Noguera-Uclés, Laura Boyero, Ana Salinas, Juan Antonio Cordero Varela, Johana Cristina Benedetti, Reyes Bernabé, Amparo Sánchez-Gastaldo, Miriam Alonso, Luís Paz-Ares, Sonia Molina-Pinelo
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers12071824

DrugSniper, a Tool to Exploit Loss-Of-Function Screens, Identifies CREBBP as a Predictive Biomarker of VOLASERTIB in Small Cell Lung Carcinoma (SCLC)
Cited by: 6
Author(s): Fernando Carazo, Cristina Bértolo, Carlos Castilla, Xabier Cendoya, Lucía Campuzano, Diego Serrano, Marian Gimeno, Francisco J. Planes, Rubén Pı́o, Luis M. Montuenga, Ángel Rubio
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers11101536

Understanding the Interplay between COX-2 and hTERT in Colorectal Cancer Using a Multi-Omics Analysis
Cited by: 24
Author(s): Georgios D. Ayiomamitis, George Notas, Thivi Vasilakaki, Aikaterini Tsavari, Styliani Vederaki, T. Theodosopoulos, Elias Kouroumalis, Apostolos Zaravinos
Software Mentions: 1
Published: almost 7 years ago

10.3390/cancers13164225

Tobacco Smoke and Electronic Cigarette Vapor Alter Enhancer RNA Expression That Can Regulate the Pathogenesis of Lung Squamous Cell Carcinoma
Cited by: 2
Author(s): Joseph C. Tsai, Omar A. Saad, Shruti Magesh, Jingyue Xu, Abby C Lee, Wei Tse Li, Jaideep Chakladar, Mark M. Fuster, Eric Y. Chang, Jessica Wang‐Rodriguez, Weg M. Ongkeko
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-79611-5

Structural and functional analysis of the Francisella lysine decarboxylase as a key actor in oxidative stress resistance
Cited by: 8
Author(s): Jan Félix, Claire Siebert, Julia Novion Ducassou, Jérôme Nigou, Pierre Garcia, Angélique Fraudeau, Karine Huard, Caroline Mas, Céline Brochier-Armanet, Yohann Couté, Irina Gutsche, Patricia Renesto
Software Mentions: 1
Published: over 5 years ago

10.1097/MD.0000000000018815

Expression of SREBP2 and cholesterol metabolism related genes in TCGA glioma cohorts
Cited by: 6
Author(s): Dali Li, Shenglan Li, Allen Z Xue, Laura A. Smith Callahan, Ying Liu
Software Mentions: 1
Published: over 6 years ago

10.1002/cam4.1484

Analysis of potential genes and pathways associated with the colorectal normal mucosa-adenoma-carcinoma sequence
Cited by: 27
Author(s): Zhiyuan Wu, Zhen Liu, Weiting Ge, Jiawei Shou, Lixin You, Hongming Pan, Weidong Han
Software Mentions: 1
Published: over 8 years ago

10.3390/cancers11101473

Circular RNAs in Clear Cell Renal Cell Carcinoma: Their Microarray-Based Identification, Analytical Validation, and Potential Use in a Clinico-Genomic Model to Improve Prognostic Accuracy
Cited by: 33
Author(s): Antonia Franz, Bernhard Ralla, Sabine Weickmann, Monika Jung, Hannah Rochow, Carsten Stephan, Andreas Erbersdobler, Ergin Kilic, Annika Fendler, Klaus Jung
Software Mentions: 1
Published: almost 7 years ago

10.1097/MD.0000000000014074

Identification of key regulators of pancreatic ductal adenocarcinoma using bioinformatics analysis of microarray data
Cited by: 5
Author(s): Nan Li, Xin Zhao, Shengyi You
Software Mentions: 1
Published: over 7 years ago

10.3390/medicina55090564

Biomarker Potential of Plasma MicroRNA-150-5p in Prostate Cancer
Cited by: 19
Author(s): Ionuț Andrei Păunescu, Răzvan Bardan, Anca Marcu, Diana Nițușcă, Alis Dema, Șerban Negru, Ovidiu Bălăcescu, Loredana Bălăcescu, A. Cumpanas, Ioan Ovidiu Sîrbu, Bogdan Petruţ, Edward Șeclăman, Cătălin Marian
Software Mentions: 1
Published: about 7 years ago

10.3390/cancers13102401

A Novel Three-Gene Score as a Predictive Biomarker for Pathologically Complete Response after Neoadjuvant Chemotherapy in Triple-Negative Breast Cancer
Cited by: 12
Author(s): Masanori Oshi, Fernando A. Angarita, Yoshihisa Tokumaru, Li Yan, Ryusei Matsuyama, Itaru Endo, Kazuaki Takabe
Software Mentions: 1
Published: over 5 years ago

10.1155/2015/737310

Role of Calprotectin as a Modulator of the IL27-Mediated Proinflammatory Effect on Endothelial Cells
Cited by: 12
Author(s): Susann Antonia Dorosz, Aurélien Ginolhac, Thilo Kähne, Michael Naumann, Thomas Sauter, Alexandre Salsmann, Jean-Luc Bueb
Software Mentions: 1
Published: over 11 years ago

10.3390/cancers4041212

dNTP Supply Gene Expression Patterns after P53 Loss
Cited by: 7
Author(s): Tomas Radivoyevitch, Yogen Saunthararajah, John J. Pink, Gina Ferris, Ian Lent, Mark W. Jackson, Damian J. Junk, Charles Kunos
Software Mentions: 1
Published: almost 14 years ago

10.3390/cancers12123857

Proteomic Resistance Biomarkers for PI3K Inhibitor in Triple Negative Breast Cancer Patient-Derived Xenograft Models
Cited by: 7
Author(s): Zhanfang Guo, Tina Primeau, Jingqin Luo, Cynthia Zhang, Hua Sun, Jeremy Hoog, Feng Gao, Shixia Huang, Dean P. Edwards, Sherri R. Davies, Rebecca Aft, Ding Li, Matthew J. Ellis, Shunqiang Li, X. Cynthia
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers11040587

Integrin α10, a Novel Therapeutic Target in Glioblastoma, Regulates Cell Migration, Proliferation, and Survival
Cited by: 23
Author(s): Matilda Munksgaard Thorén, Katarzyna Chmielarska Masoumi, Cecilia Krona, Xiaoli Huang, Soumi Kundu, Linnéa Schmidt, Karin Forsberg-Nilsson, Marcus F. Keep, Elisabet Englund, Sven Nelander, Bo Holmqvist, Evy Lundgren-Åkerlund
Software Mentions: 1
Published: over 7 years ago

10.3390/cancers11040559

New Insights into the Implication of Epigenetic Alterations in the EMT of Triple Negative Breast Cancer
Cited by: 61
Author(s): Noura Khaled, Yannick Bidet
Software Mentions: 1
Published: over 7 years ago

10.3390/cancers12061645

Drugs Targeting Tumor-Initiating Cells Prolong Survival in a Post-Surgery, Post-Chemotherapy Ovarian Cancer Relapse Model
Cited by: 20
Author(s): Brittney S. Harrington, Miwako Ozaki, Michael W. Caminear, Lídia Hernandez, Elizabeth Jordan, Nicholas J Kalinowski, Ian S. Goldlust, Rajarshi Guha, Marc Ferrer, Craig J. Thomas, Jyoti Shetty, Bao Tran, Nathan Wong, Carrie D. House, Christina M. Annunziata
Software Mentions: 1
Published: about 6 years ago

10.1186/s12974-018-1386-z

The atypical RhoGTPase RhoE/Rnd3 is a key molecule to acquire a neuroprotective phenotype in microglia
Cited by: 10
Author(s): Veronika E. Neubrand, Irene Forte-Lago, Marta Caro, Mario Delgado
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijms22041523

Multiomics Integration in Skin Diseases with Alterations in Notch Signaling Pathway: PlatOMICs Phase 1 Deployment
Cited by: 8
Author(s): Lucas André Cavalcanti Brandão, Paola Maura Tricarico, Rossella Gratton, Almerinda Agrelli, Luisa Zupin, Haissam Abou-Saleh, Romero Marinho de Moura, Sérgio Crovella
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-83138-8

MUTYH is associated with hepatocarcinogenesis in a non-alcoholic steatohepatitis mouse model
Cited by: 4
Author(s): Hiroki Sakamoto, Koji Miyanishi, Shingo Tanaka, Ryo Itô, Kota Hamaguchi, Akira Sakurada, Masanori Sato, Tomohiro Kubo, Takahiro Osuga, Kazuyuki Murase, Kohichi Takada, Yusaku Nakabeppu, Masayoshi Kobune, Junji Kato
Software Mentions: 1
Published: over 5 years ago