10.1038/s41419-019-1393-8

Obesity-associated inflammation triggers an autophagy–lysosomal response in adipocytes and causes degradation of perilipin 1
Cited by: 45
Author(s): Liping Ju, Junfeng Han, Xiaoyan Zhang, Yujie Deng, Yong Han, Congrong Wang, Xiaohua Li, Shuqin Chen, Miriayi Alimujiang, Xu Li, Qichen Fang, Ying Yang, Weiping Jia
Software Mentions: 2
Published: over 7 years ago

10.1038/s41419-021-03542-w

Exovesicular-Shh confers Imatinib resistance by upregulating Bcl2 expression in chronic myeloid leukemia with variant chromosomes
Cited by: 5
Author(s): Anusha, Hamza Dalal, Sitalakshmi Subramanian, V. P. Snijesh, Divya A. Gowda, Hanumanthappa Krishnamurthy, Sharat Damodar, Neha Vyas
Software Mentions: 2
Published: over 5 years ago

10.1038/s41419-020-03231-0

ASH2L drives proliferation and sensitivity to bleomycin and other genotoxins in Hodgkin’s lymphoma and testicular cancer cells
Cited by: 7
Author(s): Daniel Constantin, Christian Widmann
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41420-021-00517-w

Mortalin/glucose-regulated protein 75 promotes the cisplatin-resistance of gastric cancer via regulating anti-oxidation/apoptosis and metabolic reprogramming
Cited by: 8
Author(s): Yi Dai, Li Fan, Yuwen Jiao, Guoguang Wang, Tian Zhan, Youyi Xia, Hanyang Liu, Haojun Yang, Jian-Ping Zhang, Liming Tang
Software Mentions: 2
Published: over 5 years ago

10.1038/s41420-021-00575-0

Long noncoding RNA LINC00261 upregulates ITIH5 to impair tumorigenic ability of pancreatic cancer stem cells
Cited by: 4
Author(s): Lijuan Zou, Hengpeng He, Zhiguo Li, Ou Chen, Xiukun Jia, Hao Zhang
Software Mentions: 2
Published: about 5 years ago

10.1038/s41420-021-00649-z

Long noncoding RNA DLGAP1-AS2 facilitates Wnt1 transcription through physically interacting with Six3 and drives the malignancy of gastric cancer
Cited by: 12
Author(s): Jiawei Lu, Ying Xü, Wenjie Xie, Yinbing Tang, Heteng Zhang, Beibei Wang, Ji Mao, Rui Tao, Pengcheng Jiang, Wenbo Zhang
Software Mentions: 2
Published: almost 5 years ago

10.1111/cmi.12890

Systematic gene overexpression in<i>Candida albicans</i>identifies a regulator of early adaptation to the mammalian gut
Cited by: 35
Author(s): Sadri Znaidi, Lasse van Wijlick, Arturo Hernández‐Cervantes, Natacha Sertour, Jean‐Luc Desseyn, Frédéric Vincent, Ralitsa Atanassova, Valérie Gouyer, Carol A. Munro, Sophie Bachellier‐Bassi, Frédéric Dalle, Thierry Jouault, Marie‐Elisabeth Bougnoux, Christophe d’Enfert
Software Mentions: 2
Published: about 8 years ago

10.1186/s11658-021-00270-z

Circular RNA expression profile in transgenic diabetic mouse kidneys
Cited by: 4
Author(s): Xuan Xiong, Changchun Liu, Meiren Shen, Qian Yang, Qiang Zhao, Xiaoyan Li, Xiaoshi Zhong, Zhiwei Wang
Software Mentions: 2
Published: over 5 years ago

10.1007/s00018-020-03528-5

The secreted inhibitor of invasive cell growth CREG1 is negatively regulated by cathepsin proteases
Cited by: 2
Author(s): Alejandro Gomez-Auli, Larissa E. Hillebrand, D. Christen, Sira C. Günther, Martin L. Biniossek, Christoph Peters, Oliver Schilling, Thomas Reinheckel
Software Mentions: 2
Published: over 6 years ago

10.1007/s00018-019-03358-0

Direct conversion of human fibroblasts into therapeutically active vascular wall-typical mesenchymal stem cells
Cited by: 13
Author(s): Jennifer Steens, Kristian Unger, Lea Klar, Anika Neureiter, Karolin Wieber, Julia Heß, Heinz Jakob, Hannes Klump, Diana Klein
Software Mentions: 2
Published: almost 7 years ago

10.1016/j.celrep.2015.10.030

Chromatin Dynamics and the RNA Exosome Function in Concert to Regulate Transcriptional Homeostasis
Cited by: 33
Author(s): Mayuri Rege, Vidya Subramanian, Chenchen Zhu, Tsung Han Hsieh, Assaf Weiner, Nir Friedman, Sandra Clauder‐Münster, Lars M. Steinmetz, Oliver J. Rando, Laurie A. Boyer, Craig L. Peterson
Software Mentions: 2
Published: almost 11 years ago

10.1016/j.celrep.2019.09.080

MitoRibo-Tag Mice Provide a Tool for In Vivo Studies of Mitoribosome Composition
Cited by: 22
Author(s): Jakob D. Busch, Miriam Cipullo, Ilian Atanassov, Ana Bratić, Eduardo Silva Ramos, Thomas Schöndorf, Xinping Li, Sarah F Pearce, Dusanka Milenkovic, Joanna Rorbach, Nils‐Göran Larsson
Software Mentions: 2
Published: almost 7 years ago

10.1016/j.celrep.2018.02.027

S. aureus Evades Macrophage Killing through NLRP3-Dependent Effects on Mitochondrial Trafficking
Cited by: 62
Author(s): Taylor S. Cohen, Michelle L. Boland, Brandon B. Boland, Virginia Takahashi, Andrey Tovchigrechko, Young Lee, Aimee D. Wilde, Mark J. Mazaitis, Omari Jones-Nelson, Christine Tkaczyk, Rajiv Raja, C. Kendall Stover, Bret R. Sellman
Software Mentions: 2
Published: over 8 years ago

10.1016/j.xcrm.2021.100381

Dual targeting of lymphocyte homing and retention through α4β7 and αEβ7 inhibition in inflammatory bowel disease
Cited by: 20
Author(s): Bingbing Dai, Jason A. Hackney, Ryan Ichikawa, Allen Nguyen, Justin Elstrott, Luz D. Orozco, Kan Sun, Zora Modrušan, Alvin Gogineni, Alexis Scherl, John Gubatan, Aida Habtezion, Monika Deswal, Ma Somsouk, William A. Faubion, Akiko Chai, Zaineb Sharafali, Azra Hassanali, Young S. Oh, Swati Tole, Jacqueline McBride, Mary E. Keir, Tangsheng Yi
Software Mentions: 2
Published: about 5 years ago

10.1038/cr.2017.106

5-Hydroxymethylcytosine signatures in cell-free DNA provide information about tumor types and stages
Cited by: 181
Author(s): Chun-Xiao Song, Senlin Yin, Li Ma, Amanda Wheeler, Yu Chen, Yan Zhang, Bin Liu, Junjie Xiong, Weihan Zhang, Jian-Kun Hu, Zong-Guang Zhou, Biao Dong, Ze Tian, Stefanie S. Jeffrey, Mei-Sze Chua, Samuel So, Weimin Liu, Yuquan Wei, Jiajie Diao, Dan Xie, Stephen R. Quake
Software Mentions: 2
Published: about 9 years ago

10.1016/j.stem.2018.01.020

Macrophage-Derived Extracellular Succinate Licenses Neural Stem Cells to Suppress Chronic Neuroinflammation
Cited by: 189
Author(s): Luca Peruzzotti‐Jametti, Joshua D. Bernstock, Nunzio Vicario, Ana S.H. Costa, Chee Keong Kwok, Tommaso Leonardi, Lee M. Booty, Iacopo Bicci, Beatrice Balzarotti, Giulio Volpe, Giulia Mallucci, Giulia Manferrari, Matteo Donegà, Nunzio Iraci, Alice Braga, John M. Hallenbeck, Michael P. Murphy, Frank Edenhofer, Christian Frezza, Stefano Pluchino
Software Mentions: 2
Published: over 8 years ago

10.3390/cells10010101

MiR-26a-5p as a Reference to Normalize MicroRNA qRT-PCR Levels in Plasma Exosomes of Pediatric Hematological Malignancies
Cited by: 18
Author(s): Carlotta C. Damanti, Enrico Gaffo, Federica Lovisa, Anna Garbin, Piero Di Battista, Ilaria Gallingani, Anna Tosato, Marta Pillon, Elisa Carraro, Maurizio Mascarin, Caterina Elia, Alessandra Biffi, Stefania Bortoluzzi, Lara Mussolin
Software Mentions: 2
Published: over 5 years ago

10.3390/cells9020448

A System Based-Approach to Examine Host Response during Infection with Influenza A Virus Subtype H7N9 in Human and Avian Cells
Cited by: 2
Author(s): Biruhalem Taye, Hui Chen, David Yeo, Shirley Gek Kheng Seah, Michelle Wong, Richard J. Sugrue, Boon Huan Tan
Software Mentions: 2
Published: over 6 years ago

10.3390/cells9030676

Loss of Cx43 in Murine Sertoli Cells Leads to Altered Prepubertal Sertoli Cell Maturation and Impairment of the Mitosis-Meiosis Switch
Cited by: 10
Author(s): Erika Hilbold, O. Distl, Martina Hoedemaker, S. Wilkening, Rüdiger Behr, Aleksandar Rajkovic, Marion Langeheine, Kristina Rode, Klaus Jung, Julia Metzger, Ralph Brehm
Software Mentions: 2
Published: over 6 years ago

10.3390/cells8060583

Mitochondrial Transcriptome Control and Intercompartment Cross-Talk During Plant Development
Cited by: 6
Author(s): Adnan Khan Niazi, Étienne Delannoy, Rana Khalid Iqbal, Daria Mileshina, Romain Val, Marta Gabryelska, Eliza Wyszko, Ludivine Soubigou‐Taconnat, Maciej Szymański, Jan Barciszewski, Frédérique Weber-Lotfi, José M. Gualberto, André Dietrich
Software Mentions: 2
Published: over 7 years ago

10.3390/cells9051237

Exogenous Liposomal Ceramide-C6 Ameliorates Lipidomic Profile, Energy Homeostasis, and Anti-Oxidant Systems in NASH
Cited by: 12
Author(s): F. Zanieri, Ana Levi, David Montefusco, Lisa Longato, Francesco De Chiara, Luca Frenguelli, Sara Omenetti, Fausto Andreola, TuVinh Luong, Veronica Massey, Juan Caballería, Constantino Fondevila, Sriram S. Shanmugavelandy, Todd E. Fox, Giuseppe Mazza, Josepmaria Argemí, Ramón Bataller, L. Ashley Cowart, Mark Kester, Massimo Pinzani, Krista Rombouts
Software Mentions: 2
Published: over 6 years ago

10.3390/cells8121556

Influence of Liver Fibrosis on Lobular Zonation
Cited by: 39
Author(s): Ahmed Ghallab, Maiju Myllys, Christian H. Holland, Ayham Zaza, Walaa Murad, Reham Hassan, Yasser A. Ahmed, Tahany Abbas, Eman A. Abdelrahim, Kai Markus Schneider, Madlen Matz‐Soja, Jörg Reinders, Rolf Gebhardt, Marie‐Luise Berres, Maximilian Hatting, Dirk Drasdo, Julio Sáez-Rodríguez, Christian Trautwein, Jan G. Hengstler
Software Mentions: 2
Published: almost 7 years ago

10.3390/cells9102272

Small-Molecule Chemical Knockdown of MuRF1 in Melanoma Bearing Mice Attenuates Tumor Cachexia Associated Myopathy
Cited by: 13
Author(s): Volker Adams, Victoria Gußen, Sergey Zozulya, André Cruz, Anselmo Sigari Moriscot, Axel Linke, Siegfried Labeit
Software Mentions: 2
Published: almost 6 years ago

10.3390/cells9010099

Csf1 Deficiency Dysregulates Glial Responses to Demyelination and Disturbs CNS White Matter Remyelination
Cited by: 16
Author(s): Bartosz Wylot, Jakub Mieczkowski, Sylwia Niedziółka, Bożena Kamińska, Małgorzata Zawadzka
Software Mentions: 2
Published: over 6 years ago

10.3390/cells9051274

Evidence for Overlapping and Distinct Biological Activities and Transcriptional Targets Triggered by Fibroblast Growth Factor Receptor 2b Signaling between Mid- and Early Pseudoglandular Stages of Mouse Lung Development
Cited by: 12
Author(s): Matthew R. Jones, Arun Lingampally, Jin Wu, Jamschid Sedighi, Negah Ahmadvand, Jochen Wilhelm, Ana Ivonne Vazquez‐Armendariz, Susanne Herold, Chengshui Chen, Jin‐San Zhang, Savério Bellusci, Cho-Ming Chao
Software Mentions: 2
Published: over 6 years ago

10.1186/s13148-019-0641-1

Impact of chemotherapy for breast cancer on leukocyte DNA methylation landscape and cognitive function: a prospective study
Cited by: 30
Author(s): Song Yao, Qiang Hu, Sarah L. Kerns, Li Yan, Adedayo A. Onitilo, Jamal Misleh, Kelley Lynn Young, Lianlian Lei, Javier Bautista, Mostafa R. Mohamed, Supriya G. Mohile, Christine B. Ambrosone, Song Liu, Michelle Christine Janelsins
Software Mentions: 2
Published: over 7 years ago

10.1186/s13148-015-0159-0

The integrative epigenomic-transcriptomic landscape of ER positive breast cancer
Cited by: 22
Author(s): Yang Gao, Allison Jones, Peter A. Fasching, Matthias Ruebner, Matthias W. Beckmann, Martin Widschwendter, Andrew E. Teschendorff
Software Mentions: 2
Published: almost 11 years ago

10.1186/s13148-021-01002-y

Different methylation signatures at diagnosis in patients with high-risk myelodysplastic syndromes and secondary acute myeloid leukemia predict azacitidine response and longer survival
Cited by: 14
Author(s): Marta Cabezón, Roberto Malinverni, Joan Bargay, Blanca Xicoy, Sílvia Marcé, Ana Garrido, Mar Tormo, Leonor Arenillas, Rosa Coll, Josep Borrás, M.J. Jiménez, Montserrat Hoyos, David Valcárcel, Lourdes Escoda, Ferrán Vall-Llovera, Antoni García, Llorens Font, Elena Rámila, Marcus Buschbeck, Lurdes Zamora
Software Mentions: 2
Published: over 5 years ago

10.1186/s13148-018-0571-3

Two histologically colorectal carcinomas subsets from the serrated pathway show different methylome signatures and diagnostic biomarkers
Cited by: 12
Author(s): José García‐Solano, María C. Turpín, Daniel Torres-Moreno, Francisco Huertas-López, Anne Tuomisto, Markus J. Mäkinen, Ana Conesa, Pablo Conesa‐Zamora
Software Mentions: 2
Published: almost 8 years ago

10.1186/s13148-016-0273-7

Global DNA methylation patterns in Barrett’s esophagus, dysplastic Barrett’s, and esophageal adenocarcinoma are associated with BMI, gender, and tobacco use
Cited by: 25
Author(s): Andrew M. Kaz, Chao Jen Wong, Vinay Varadan, Joseph E. Willis, Amitabh Chak, William M. Grady
Software Mentions: 2
Published: almost 10 years ago

10.1186/s13148-019-0733-y

DNA methylation of individual repetitive elements in hepatitis C virus infection-induced hepatocellular carcinoma
Cited by: 27
Author(s): Yinan Zheng, Ryan A. Hlady, Brian T. Joyce, Keith D. Robertson, Chunyan He, Drew Nannini, Warren A. Kibbe, Chad Achenbach, Robert L. Murphy, Lewis R. Roberts, Lifang Hou
Software Mentions: 2
Published: almost 7 years ago

10.1186/s13148-021-01010-y

Genome-wide DNA methylation profiling is able to identify prefibrotic PMF cases at risk for progression to myelofibrosis
Cited by: 0
Author(s): Ulrich Lehmann, Helge Stark, Stephan Bartels, Jérôme Schlué, Guntram Büsche, Hans Kreipe
Software Mentions: 2
Published: over 5 years ago

10.1186/s13148-015-0112-2

DNA methylation signature in peripheral blood reveals distinct characteristics of human X chromosome numerical aberrations
Cited by: 59
Author(s): Ingo G. H. Schmidt‐Wolf, Muhammad Ahmer Jamil, Nicole Nuesgen, Felix Schreiner, Lutz Priebe, Per Hoffmann, Stefan Herns, Markus M. Nöthen, Holger Fröhlich, Johannes Oldenburg, Joachim Woelfle, Osman El‐Maarri
Software Mentions: 2
Published: about 11 years ago

10.1186/s13148-020-00884-8

meQTL and ncRNA functional analyses of 102 GWAS-SNPs associated with depression implicate HACE1 and SHANK2 genes
Cited by: 19
Author(s): Diana‐Maria Ciuculete, Sarah Voisin, Lara Kular, Jan‐Ingvar Jönsson, Mathias Rask‐Andersen, Jessica Mwinyi, Helgi B. Schiöth
Software Mentions: 2
Published: about 6 years ago

10.1186/s13148-019-0790-2

The effects of bariatric surgery on clinical profile, DNA methylation, and ageing in severely obese patients
Cited by: 18
Author(s): Eliza Fraszczyk, Mirjam Luijten, Annemieke M.W. Spijkerman, Harold Snieder, Paul Wackers, Vincent W. Bloks, Carolina Ferreira Nicoletti, Carla Barbosa Nonino, Ana B. Crujeiras, Wim A. Buurman, Jan Greve, Sander S. Rensen, Bruce H. R. Wolffenbuttel, Jana V. van Vliet-Ostaptchouk
Software Mentions: 2
Published: over 6 years ago

10.1186/s13148-018-0491-2

Global DNA methylation changes spanning puberty are near predicted estrogen-responsive genes and enriched for genes involved in endocrine and immune processes
Cited by: 38
Author(s): Emma E. Thompson, Jessie Nicodemus‐Johnson, Kyung Won Kim, James E. Gern, Daniel J. Jackson, Robert F. Lemanske, Carole Ober
Software Mentions: 2
Published: over 8 years ago

10.1186/s13148-015-0128-7

Methylome profiling reveals functions and genes which are differentially methylated in serrated compared to conventional colorectal carcinoma
Cited by: 19
Author(s): Pablo Conesa‐Zamora, José García‐Solano, María del Carmen Turpin, Patricia Sebastián-León, Daniel Torres-Moreno, Eduardo Estrada, Anne Tuomisto, Jamie Wilce, Markus J. Mäkinen, Miguel Pérez‐Guillermo, Ana Conesa
Software Mentions: 2
Published: about 11 years ago

10.1186/s13148-021-01072-y

Disease-associated DNA methylation signatures in esophageal biopsies of children diagnosed with Eosinophilic Esophagitis
Cited by: 1
Author(s): Caterina Strisciuglio, Felicity Payne, Komal Nayak, Marta Andreozzi, Alessandra Vitale, Erasmo Miele, Matthias Zilbauer
Software Mentions: 2
Published: over 5 years ago

10.1186/s13148-019-0693-2

SLCO4C1 promoter methylation is a potential biomarker for prognosis associated with biochemical recurrence-free survival after radical prostatectomy
Cited by: 9
Author(s): Xin Li, Wanfeng Zhang, Song Jing, Xianqin Zhang, Longke Ran, Yong He
Software Mentions: 2
Published: about 7 years ago

10.1186/s13148-018-0562-4

Identification of SUV39H2 as a potential oncogene in lung adenocarcinoma
Cited by: 17
Author(s): Yu Zheng, Baihui Li, Jian Wang, Yanjuan Xiong, Kaiyuan Wang, Qi Ying, Houfang Sun, Lei Wu, Lili Yang
Software Mentions: 2
Published: almost 8 years ago

10.1186/s13148-021-01105-6

Chromatin accessibility changes at intergenic regions are associated with ovarian cancer drug resistance
Cited by: 7
Author(s): John Gallon, Erick Loomis, Edward Curry, Nicholas G. Martin, Leigh Brody, Ian Garner, Robert E. Brown, James M. Flanagan
Software Mentions: 2
Published: over 5 years ago

10.1186/s13148-019-0628-y

Genome-wide methylation profiling identified novel differentially hypermethylated biomarker MPPED2 in colorectal cancer
Cited by: 23
Author(s): Simeng Gu, Shujuan Lin, Yichun Ding, Sangni Qian, Danjie Jiang, Xiaocong Zhang, Qilong Li, Jing Yang, Xiaojiang Ying, Zhenjun Li, Mengling Tang, Jianbing Wang, Mingjuan Jin, Kun Chen
Software Mentions: 2
Published: over 7 years ago

10.1186/s13148-017-0339-1

Cord blood hematopoietic cells from preterm infants display altered DNA methylation patterns
Cited by: 23
Author(s): Olivia M. de Goede, Pascal M. Lavoie, Wendy P. Robinson
Software Mentions: 2
Published: over 9 years ago

10.1186/s13148-017-0329-3

Epigenetic signatures of gestational diabetes mellitus on cord blood methylation
Cited by: 83
Author(s): Larissa Haertle, Nady El Hajj, Marcus Dittrich, Tobias Müller, Indrajit Nanda, H Lehnen, Thomas Haaf
Software Mentions: 2
Published: over 9 years ago

10.1186/s13148-021-01012-w

Changes in epigenetic profiles throughout early childhood and their relationship to the response to pneumococcal vaccination
Cited by: 4
Author(s): Sara Pischedda, Daniel O’Connor, Benjamin P. Fairfax, Antonio Salas, Federico Martinón‐Torres, Andrew J. Pollard, Johannes Trück
Software Mentions: 2
Published: over 5 years ago

10.1186/s13148-015-0052-x

Genome-scale hypomethylation in the cord blood DNAs associated with early onset preeclampsia
Cited by: 42
Author(s): Travers Ching, James C. Ha, Min-Ae Song, Maarit Tiirikainen, J. Molnár, Marla J. Berry, Dena Towner, Lana X. Garmire
Software Mentions: 2
Published: over 11 years ago

10.1186/s13148-019-0684-3

Functional DNA methylation signatures for autism spectrum disorder genomic risk loci: 16p11.2 deletions and CHD8 variants
Cited by: 49
Author(s): Michelle Siu, Darci T. Butcher, Andrei L. Turinsky, Cheryl Cytrynbaum, Dimitri J. Stavropoulos, Susan Walker, Oana Caluseriu, M. Carter, Youliang Lou, Rob Nicolson, Stelios Georgiades, Péter Szatmári, Evdokia Anagnostou, Stephen W. Scherer, Sanaa Choufani, Michael Brudno, Rosanna Weksberg
Software Mentions: 2
Published: about 7 years ago

10.1186/s13148-019-0648-7

Genetic regulation of methylation in human endometrium and blood and gene targets for reproductive diseases
Cited by: 24
Author(s): Sally Mortlock, Restuadi Restuadi, Rupert Levien, Jane E. Girling, Sarah J. Holdsworth-Carson, Martin Healey, Zhihong Zhu, Ting Qi, Yang Wu, Samuel W. Lukowski, Peter A. W. Rogers, Jian Yang, Allan F. McRae, Jenny N. Fung, Grant W. Montgomery
Software Mentions: 2
Published: over 7 years ago

10.1093/emph/eow021

Vancomycin gene selection in the microbiome of urban<i>Rattus norvegicus</i>from hospital environment
Cited by: 9
Author(s): Thomas Arn Hansen, Tejal Joshi, Anders Rhod Larsen, Paal Skytt Andersen, Klaus Harms, Sarah Mollerup, Eske Willerslev, Kurt Fuursted, Lars Peter Nielsen, Anders J. Hansen
Software Mentions: 2
Published: over 10 years ago

10.1016/j.exer.2019.03.024

Mutation in the mouse histone gene Hist2h3c1 leads to degeneration of the lens vesicle and severe microphthalmia
Cited by: 4
Author(s): Sharmilee Vetrivel, Natascia Tiso, Andrea Kügler, Martin Irmler, Marion Horsch, Johannes Beckers, Daniela Hladik, Florian Giesert, Valérie Gailus‐Durner, Helmut Fuchs, Sibylle Sabrautzki, Martin Hrabé de Angelis, Jochen Graw
Software Mentions: 2
Published: almost 7 years ago

10.1016/j.exer.2019.107901

Features of ectopic lymphoid-like structures in human uveitis
Cited by: 9
Author(s): Simon Epps, Natalie Coplin, Philip J Luthert, Andrew D. Dick, Sarah E. Coupland, Lindsay B. Nicholson
Software Mentions: 2
Published: over 6 years ago

10.1016/j.exphem.2018.04.002

Synergistic action of dual IGF1/R and MEK inhibition sensitizes childhood acute lymphoblastic leukemia (ALL) cells to cytotoxic agents and involves downregulation of STAT6 and PDAP1
Cited by: 8
Author(s): Victoria Weston, Wenbin Wei, Tatjana Stankovic, Pamela Kearns
Software Mentions: 2
Published: about 8 years ago

10.1038/s12276-019-0226-2

Systems biology approaches to investigating the roles of extracellular vesicles in human diseases
Cited by: 38
Author(s): András Gézsi, Árpád Ferenc Kovács, Tamás Visnovitz, Edit I. Buzás
Software Mentions: 2
Published: over 7 years ago

10.3892/etm.2014.1789

Identification of genes in HepG2 cells that respond to DNA methylation and histone deacetylation inhibitor treatment
Cited by: 4
Author(s): Qiang Sun, Yu Xie, Guojing Wang, Jidong Li
Software Mentions: 2
Published: over 12 years ago

10.12688/f1000research.6581.1

Psoriasis is characterized by deficient negative immune regulation compared to transient delayed-type hypersensitivity reactions
Cited by: 14
Author(s): Nicholas Gulati, Mayte Suárez‐Fariñas, Joel Correa da Rosa, James G. Krueger
Software Mentions: 2
Published: over 11 years ago

10.12688/f1000research.14451.3

Predicting lithium treatment response in bipolar patients using gender-specific gene expression biomarkers and machine learning
Cited by: 13
Author(s): Andy R. Eugene, Jolanta Masiak, Beata Eugene
Software Mentions: 2
Published: almost 8 years ago

10.12688/f1000research.8001.1

Chromas from chromatin: sonification of the epigenome
Cited by: 2
Author(s): Davide Cittaro, Dejan Lazarevic, Paolo Provero
Software Mentions: 2
Published: over 10 years ago

10.1096/fj.202002484R

Sperm proteins and cancer‐testis antigens are released by the seminiferous tubules in mice and men
Cited by: 14
Author(s): Liza O’Donnell, Diane Rebourcet, Laura F. Dagley, Raouda Sgaier, Giuseppe Infusini, Peter J. O’Shaughnessy, Frédéric Chalmel, Daniela Fietz, W. Weidner, Julien M. D. Legrand, Robin M. Hobbs, Robert I McLachlan, Andrew I. Webb, Adrian Pilatz, Thorsten Diemer, Lee B. Smith, Peter G. Stanton
Software Mentions: 2
Published: over 5 years ago

10.1096/fj.202001101R

Norepinephrine promotes triglyceride storage in macrophages via beta2‐adrenergic receptor activation
Cited by: 8
Author(s): Kasparas Petkevicius, Guillaume Bidault, Sam Virtue, Benjamin Jenkins, Xanthe A.M.H. van Dierendonck, Aurélien Dugourd, Julio Sáez-Rodríguez, Rinke Stienstra, Albert Koulman, António Vidal-Puig
Software Mentions: 2
Published: over 5 years ago

10.1002/1873-3468.13521

HDAC2‐dependent miRNA signature in acute myeloid leukemia
Cited by: 14
Author(s): Mariarosaria Conte, Carmela Dell’Aversana, Giulia Sgueglia, Annamaria Carissimo, Lucia Altucci
Software Mentions: 2
Published: about 7 years ago

10.1002/2211-5463.12719

Identification of differentially expressed genes and signaling pathways in chronic obstructive pulmonary disease via bioinformatic analysis
Cited by: 14
Author(s): Xinwei Huang, Yunwei Li, Xiaoran Guo, Zongxin Zhu, Xiangyang Kong, Fang Yu, Qiang Wang
Software Mentions: 2
Published: almost 7 years ago

10.1002/2211-5463.12198

Down‐regulation of miR‐146a‐5p and its potential targets in hepatocellular carcinoma validated by a <scp>TCGA</scp>‐ and <scp>GEO</scp>‐based study
Cited by: 31
Author(s): Daniel Xin Zhang, Zhihua Ye, Hai‐Wei Liang, Fanghui Ren, Ping Li, Yi‐Wu Dang, Gang Chen
Software Mentions: 2
Published: over 9 years ago

10.1002/2211-5463.12576

Genome‐wide profiling of <scp>mRNA</scp> and lnc <scp>RNA</scp> expression in dengue fever and dengue hemorrhagic fever
Cited by: 5
Author(s): Xiaolan Zhang, Xiaoming Liao, Fei Shen, Hai-jian Yu, Wensheng Yan, Yunfang Zhang, Jia-Jun Ye, Zhi-Ping Lv
Software Mentions: 2
Published: over 7 years ago

10.1002/2211-5463.13089

Cytochrome P450 2A6 is associated with macrophage polarization and is a potential biomarker for hepatocellular carcinoma
Cited by: 6
Author(s): Tao Jiang, Aizhi Zhu, Chuqi Yang, XU Chu-yun, Dan‐qian Yang, Zhaohuan Lou, Guangji Zhang
Software Mentions: 2
Published: over 5 years ago

10.1002/2211-5463.12920

Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
Cited by: 10
Author(s): Shangwei Chen, Huiping Lu, Gang Chen, Jie Yang, Wanying Huang, Xiangming Wang, Shuping Huang, Jun Liu, Zong-Wang Fu, Chen Peng, Gao‐Qiang Zhai, Jiao Luo, Xiao‐Jiao Li, Zhi‐Guang Huang, Zu‐Yun Li, Ting‐Qing Gan, Daping Yang, Wei‐Jia Mo, Hua-Fu Zhou
Software Mentions: 2
Published: about 6 years ago

10.3389/fnagi.2021.679688

Autoimmunomic Signatures of Aging and Age-Related Neurodegenerative Diseases Are Associated With Brain Function and Ribosomal Proteins
Cited by: 6
Author(s): Youlun Ju, Saleh M. Ibrahim, Frank Petersen, Xinhua Yu
Software Mentions: 2
Published: over 5 years ago

10.3389/fnagi.2021.609679

The Therapeutic Targets of Fingolimod (FTY720) Are Involved in Pathological Processes in the Frontal Cortex of Alzheimer's Disease Patients: A Network Pharmacology Study
Cited by: 14
Author(s): Pengqi Yin, Yang Xue, Tingting Wang, Di Zhong, Guozhong Li
Software Mentions: 2
Published: over 5 years ago

10.3389/fbioe.2020.558996

The G-protein Coupled Receptor GPR8 Regulates Secondary Metabolism in Trichoderma reesei
Cited by: 13
Author(s): Wolfgang Hinterdobler, Sabrina Beier, Alberto Alonso Monroy, Harald Berger, Christoph Dattenböck, Monika Schmoll
Software Mentions: 2
Published: almost 6 years ago

10.3389/fbioe.2020.00054

LINC00346 Acts as a Competing Endogenous RNA Regulating Development of Hepatocellular Carcinoma via Modulating CDK1/CCNB1 Axis
Cited by: 33
Author(s): Jinglan Jin, Hao Xu, Wanyu Li, Xiaotong Xu, Huan Liu, Wei Feng
Software Mentions: 2
Published: over 6 years ago

10.3389/fcvm.2021.647953

The Integrative Analysis of Competitive Endogenous RNA Regulatory Networks in Coronary Artery Disease
Cited by: 3
Author(s): Yuyao Ji, Tao Yan, Shijie Zhu, Runda Wu, Miao Zhu, Yangyang Zhang, Changfa Guo, Kang Yao
Software Mentions: 2
Published: almost 5 years ago

10.3389/fcvm.2020.631775

Integrative Identification of Hub Genes Associated With Immune Cells in Atrial Fibrillation Using Weighted Gene Correlation Network Analysis
Cited by: 9
Author(s): Tao Yan, Shijie Zhu, Miao Zhu, Chunsheng Wang, Changfa Guo
Software Mentions: 2
Published: over 5 years ago

10.3389/fcvm.2021.661709

Regulatory T Cell-Related Gene Biomarkers in the Deterioration of Atherosclerosis
Cited by: 14
Author(s): Meng Xia, Qingmeng Wu, Pengfei Chen, Qi Cheng
Software Mentions: 2
Published: over 5 years ago

10.3389/fcvm.2021.656263

Bioinformatics Analysis Reveals the Potential Diagnostic Biomarkers for Abdominal Aortic Aneurysm
Cited by: 12
Author(s): Xinsheng Xie, En Ci Wang, Dongming Xu, Xiaolong Shu, Yu Zhao, Daqiao Guo, Weiguo Fu, Lixin Wang
Software Mentions: 2
Published: about 5 years ago

10.3389/fcell.2020.587778

Dose-Dependent and Subset-Specific Regulation of Midbrain Dopaminergic Neuron Differentiation by LEF1-Mediated WNT1/b-Catenin Signaling
Cited by: 13
Author(s): Parivash Nouri, Sebastian Götz, Benedict Rauser, Martin Irmler, Changgeng Peng, Dietrich Trümbach, Christian Kempny, Carina G Lechermeier, Agnes Bryniok, Andrea Dlugos, Ellen Euchner, Johannes Beckers, Claude Brodski, Claudia Klümper, Wolfgang Wurst, Nilima Prakash
Software Mentions: 2
Published: almost 6 years ago

10.3389/fcell.2021.647106

Seven Glycolysis-Related Genes Predict the Prognosis of Patients With Pancreatic Cancer
Cited by: 7
Author(s): Han Nie, Cancan Luo, Kaili Liao, Jiasheng Xu, Xue-Xin Cheng, Xiaozhong Wang
Software Mentions: 2
Published: over 5 years ago

10.3389/fcell.2021.726323

Tumor Cell-Derived Exosomal Circ-0072088 Suppresses Migration and Invasion of Hepatic Carcinoma Cells Through Regulating MMP-16
Cited by: 20
Author(s): Ye Lin, Zehao Zheng, Jianxi Wang, Zhen Zhao, Tianyi Peng
Software Mentions: 2
Published: about 5 years ago

10.3389/fcell.2021.670890

Identify Function of WASL in Prognosis of Cervical Cancer Based on Omics Data
Cited by: 0
Author(s): Jian Hou, Chen Chen, Yingying Hu, Qiyong Gong, Lijuan Gan, Yu Xu
Software Mentions: 2
Published: over 5 years ago

10.3389/fcell.2019.00204

Time-Course Transcriptome Analysis for Drug Repositioning in Fusobacterium nucleatum-Infected Human Gingival Fibroblasts
Cited by: 10
Author(s): Wenyan Kang, Zhilong Jia, Di Tang, Xiaojing Zhao, Jianxin Shi, Qi Jia, Kunlun He, Qiang Feng
Software Mentions: 2
Published: almost 7 years ago

10.3389/fendo.2020.00238

Urinary Sediment Transcriptomic and Longitudinal Data to Investigate Renal Function Decline in Type 1 Diabetes
Cited by: 5
Author(s): Maria Beatriz Monteiro, Tatiana Souza Pelaes, Daniele Pereira Santos‐Bezerra, Karina Thieme, Antônio M. Lerário, Sueli Mieko Oba-Shinjo, Ubiratan Fabres Machado, Marisa Passarelli, Suely Kazue Nagahashi Marie, Maria Lúcia Corrêa-Giannella
Software Mentions: 2
Published: over 6 years ago

10.3389/fendo.2021.665134

Soluble Neuropilin-1 Response to Hypoglycemia in Type 2 Diabetes: Increased Risk or Protection in SARS-CoV-2 Infection?
Cited by: 2
Author(s): Abu Saleh Md Moin, Ahmed Al‐Qaissi, Thozhukat Sathyapalan, Stephen L. Atkin, Alexandra E. Butler
Software Mentions: 2
Published: about 5 years ago

10.3389/fendo.2020.611213

Integrated Analysis of Key Genes and Pathways Involved in Nonalcoholic Steatohepatitis Improvement After Roux-en-Y Gastric Bypass Surgery
Cited by: 4
Author(s): Chen Fu, Yong Zhou, Zida Wu, Yunze Li, Wenlong Zhou, Yong Wang
Software Mentions: 2
Published: over 5 years ago

10.3389/fendo.2021.713357

Heterogeneous miRNA-mRNA Regulatory Networks of Visceral and Subcutaneous Adipose Tissue in the Relationship Between Obesity and Renal Clear Cell Carcinoma
Cited by: 1
Author(s): Yuyan Liu, Yang Liu, Jiajin Hu, Zhenwei He, Lei Liu, Yanan Ma, Deliang Wen
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2018.00484

Network and Pathway Analysis of Toxicogenomics Data
Cited by: 19
Author(s): Gal Barel, Ralf Herwig
Software Mentions: 2
Published: almost 8 years ago

10.3389/fgene.2020.00537

Common Gene Modules Identified for Chicken Adiposity by Network Construction and Comparison
Cited by: 9
Author(s): Zhuoran Gao, Ran Ding, Xiangyun Zhai, Yuhao Wang, Yaofeng Chen, Yang Ch, Zhiqiang Du
Software Mentions: 2
Published: over 6 years ago

10.3389/fgene.2019.00791

Systems Biology-Based Analysis Indicates Global Transcriptional Impairment in Lead-Treated Human Neural Progenitor Cells
Cited by: 4
Author(s): Clovis Ferreira dos Reis, Iara Dantas de Souza, Diego Arthur de Azevedo Morais, Raffael Azevedo de Carvalho Oliveira, Danilo Oliveira Imparato, Rita Maria Cunha de Almeida, Rodrigo Juliani Siqueira Dalmolin
Software Mentions: 2
Published: about 7 years ago

10.3389/fgene.2019.01202

Identifying Common Genes, Cell Types and Brain Regions Between Diseases of the Nervous System
Cited by: 3
Author(s): Mengling Qi, Shuli Fan, Zhi Wang, Xiaoxing Yang, Zhixun Xie, Ken Chen, Lei Zhang, Tao Lin, Wei Liu, Xinlei Lin, Yan Yan, Yuedong Yang, Huiying Zhao
Software Mentions: 2
Published: almost 7 years ago

10.3389/fgene.2020.582274

Identification of EMT-Related Gene Signatures to Predict the Prognosis of Patients With Endometrial Cancer
Cited by: 19
Author(s): Luya Cai, Chuan Hu, Shanshan Yu, Lixiao Liu, Jinduo Zhao, Ye Zhao, Fan Lin, Xuedan Du, Qiongjie Yu, Qin Xiao
Software Mentions: 2
Published: almost 6 years ago

10.3389/fgene.2020.00230

Effect for Human Genomic Variation During the BMP4-Induced Conversion From Pluripotent Stem Cells to Trophoblast
Cited by: 5
Author(s): Haitao Li, Yajun Li, Hongde Liu, Xiao Sun
Software Mentions: 2
Published: over 6 years ago

10.3389/fgene.2016.00033

Computational Detection of Stage-Specific Transcription Factor Clusters during Heart Development
Cited by: 12
Author(s): Sebastian Zeidler, Cornelia Meckbach, Rebecca Tacke, Farah Raad, Angelica Roa, Shizuka Uchida, Wolfram‐Hubertus Zimmermann, Edgar Wingender, Mehmet Gültaş
Software Mentions: 2
Published: over 10 years ago

10.3389/fgene.2021.679612

mRBioM: An Algorithm for the Identification of Potential mRNA Biomarkers From Complete Transcriptomic Profiles of Gastric Adenocarcinoma
Cited by: 1
Author(s): Changlong Dong, Nini Rao, Wenju Du, Fenglin Gao, Xudong Lv, Guangbin Wang, Junpeng Zhang
Software Mentions: 2
Published: about 5 years ago

10.3389/fgene.2021.739344

Integrative Analysis Reveals Potentially Functional N6-Methylandenosine-Related Long Noncoding RNAs in Colon Adenocarcinoma
Cited by: 4
Author(s): Xinjie Tan, Qian Li, Qinya Zhang, Gang Fan, Zhuo Liu, Kang Zhou
Software Mentions: 2
Published: about 5 years ago

10.3389/fgene.2021.632359

Construction of a circRNA-miRNA-mRNA Regulatory Network Reveals Potential Mechanism and Treatment Options for Osteosarcoma
Cited by: 6
Author(s): Yi He, Haiting Zhou, Wei Wang, Haoran Xu, Hao Cheng
Software Mentions: 2
Published: over 5 years ago

10.3389/fgene.2021.750827

Bioinformatics Analysis Identified miR-584-5p and Key miRNA-mRNA Networks Involved in the Osteogenic Differentiation of Human Periodontal Ligament Stem Cells
Cited by: 2
Author(s): Chengze Wang, Lingling Dong, Ying Wang, Zhiwei Jiang, Jing Zhang, Guoli Yang
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2015.00014

Toxicogenomics profiling of bone marrow from rats treated with topotecan in combination with oxaliplatin: a mechanistic strategy to inform combination toxicity
Cited by: 9
Author(s): Myrtle A. Davis, Jianying Li, Enid M. Knight, Sandy Eldridge, Kellye K. Daniels, Pierre R. Bushel
Software Mentions: 2
Published: over 11 years ago

10.3389/fgene.2021.666106

ESPL1 Is a Novel Prognostic Biomarker Associated With the Malignant Features of Glioma
Cited by: 5
Author(s): Zhendong Liu, Xiaoyu Lian, Xiuru Zhang, Yongjie Zhu, Wang Zhang, Jialin Wang, Hongbo Wang, Binfeng Liu, Zhishuai Ren, Mengjun Zhang, Mingyang Li, Yanzheng Gao
Software Mentions: 2
Published: about 5 years ago

10.3389/fgene.2020.627459

Construction of Circular RNA–MicroRNA–Messenger RNA Regulatory Network of Recurrent Implantation Failure to Explore Its Potential Pathogenesis
Cited by: 6
Author(s): Jiahuan Luo, Li Zhu, Ning Zhou, Yuanyuan Zhang, Lirong Zhang, Ruopeng Zhang
Software Mentions: 2
Published: over 5 years ago

10.3389/fgene.2020.595477

Bioinformatics Analysis Reveals an Association Between Cancer Cell Stemness, Gene Mutations, and the Immune Microenvironment in Stomach Adenocarcinoma
Cited by: 16
Author(s): Zaisheng Ye, Miao Zheng, Yi Zeng, Shenghong Wei, Yi Wang, Zhitao Lin, Chen Shu, Ying Xie, Qinqin Zheng, Luchuan Chen
Software Mentions: 2
Published: almost 6 years ago

10.3389/fgene.2020.578143

Key Molecules and Pathways Underlying Sporadic Amyotrophic Lateral Sclerosis: Integrated Analysis on Gene Expression Profiles of Motor Neurons
Cited by: 10
Author(s): Jianing Lin, Pian Huang, Wei-Neng Chen, Cheng-Hui Ye, Huanxing Su, Xiaoli Yao
Software Mentions: 2
Published: almost 6 years ago

10.3389/fgene.2020.605767

The Construction and Analysis of Tumor-Infiltrating Immune Cells and ceRNA Networks in Bladder Cancer
Cited by: 9
Author(s): Aimin Jiang, Na Liu, Shengjie Bai, Jingjing Wang, Huan Gao, Xiaoqiang Zheng, Xiao Fu, Mengdi Ren, Xiaoni Zhang, Tao Tian, Zhiping Ruan, Yu Yao, Xuan Liang
Software Mentions: 2
Published: almost 6 years ago

10.3389/fgene.2020.572194

Identification of Common Differentially Expressed Genes and Potential Therapeutic Targets in Ulcerative Colitis and Rheumatoid Arthritis
Cited by: 9
Author(s): Yueying Chen, Hanyang Li, Lijie Lai, Qi Feng, Jun Shen
Software Mentions: 2
Published: almost 6 years ago