Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: ggcyto

https://packages.ecosyste.ms/registries/bioconductor.org/packages/ggcyto

Visualize Cytometry data with ggplot
2 versions
Latest release: 11 months ago
9 dependent packages
104,380 downloads total

Papers Mentioning ggcyto 13

10.3389/fcell.2020.618552

A Semi-automated Organoid Screening Method Demonstrates Epigenetic Control of Intestinal Epithelial Differentiation
Cited by: 12
Author(s): Jenny Ostrop, Rosalie T. Zwiggelaar, Marianne Terndrup Pedersen, François Gerbe, Korbinian Bösl, Håvard T. Lindholm, Alberto Díez-Sánchez, Naveen Parmar, Silke Radetzki, Jens Peter von Kries, Philippe Jay, Kim B. Jensen, C.H. Arrowsmith, Menno J. Oudhoff
Software Mentions: 12
Published: over 3 years ago

10.3390/cancers13081788

Analysis of Intra-Tumoral Macrophages and T Cells in Non-Small Cell Lung Cancer (NSCLC) Indicates a Role for Immune Checkpoint and CD200-CD200R Interactions
Cited by: 7
Author(s): Anders Tøndell, Yashwanth Subbannayya, Sissel Gyrid Freim Wahl, Arnar Flatberg, Sveinung Sørhaug, Magne Børset, Markus Haug
Software Mentions: 12
Published: over 3 years ago

10.1186/s40425-019-0764-0

34th Annual Meeting & Pre-Conference Programs of the Society for Immunotherapy of Cancer (SITC 2019): part 2
Cited by: 28
Author(s):
Software Mentions: 12
Published: almost 5 years ago

10.3389/fimmu.2020.01659

Conventional and Computational Flow Cytometry Analyses Reveal Sustained Human Intrathymic T Cell Development From Birth Until Puberty
Cited by: 2
Author(s): Marieke Lavaert, Brecht Valcke, Bart Vandekerckhove, Georges Leclercq, Kai Ling Liang, Tom Taghon
Software Mentions: 12
Published: about 4 years ago

10.7554/eLife.65372

Image3C, a multimodal image-based and label-independent integrative method for single-cell analysis
Cited by: 6
Author(s): Alice Accorsi, Andrew Box, Robert Peuß, Christopher J. Wood, Alejandro Sánchez Alvarado, Nicolas Rohner
Software Mentions: 11
Published: about 3 years ago

10.1128/mSystems.00895-20

Computational Analysis of Microbial Flow Cytometry Data
Cited by: 16
Author(s): Peter Rubbens, Ruben Props
Software Mentions: 9
Published: over 3 years ago

10.1038/s41598-020-70198-5

Computational flow cytometry of planktonic populations for the evaluation of microbiological-control programs in district cooling plants
Cited by: 0
Author(s): James McElhinney, Aurélie Mawart, Ruba Alkaabi, H. S. S. Abdelsamad, Afnan Mansour, Ayesha Hasan
Software Mentions: 6
Published: about 4 years ago

10.1093/bioinformatics/bty441

ggCyto: next generation open-source visualization software for cytometry
Cited by: 55
Author(s): Phu T. Van, Wenxin Jiang, Raphaël Gottardo, Greg Finak
Software Mentions: 5
Published: over 6 years ago

10.1002/cyto.a.23663

<i>CytoML</i> for cross‐platform cytometry data sharing
Cited by: 23
Author(s): Greg Finak, Wenxin Jiang, Raphaël Gottardo
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-021-92838-0

Light intensity and spectral composition drive reproductive success in the marine benthic diatom Seminavis robusta
Cited by: 4
Author(s): Gust Bilcke, Lore Van Craenenbroeck, Alexandre Castagna, Cristina Maria Osuna-Cruz, Klaas Vandepoele, Koen Sabbe, Lieven De Veylder, Wim Vyverman
Software Mentions: 5
Published: about 3 years ago

10.7554/eLife.51739

A phenotypic screening platform utilising human spermatozoa identifies compounds with contraceptive activity
Cited by: 14
Author(s): Franz S Gruber, Zoe C Johnston, Christopher L.R. Barratt, Paul D. Andrews
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pgen.1008686

Quantitative genetic analysis deciphers the impact of cis and trans regulation on cell-to-cell variability in protein expression levels
Cited by: 6
Author(s): Michael D. Morgan, Étienne Patin, Bernd Jabla, Milena Hasan, Lluís Quintana‐Murci, John C. Marioni
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.ppat.1009659

Sickle-trait hemoglobin reduces adhesion to both CD36 and EPCR by Plasmodium falciparum-infected erythrocytes
Cited by: 5
Author(s): Jens E. V. Petersen, Joseph W. Saelens, Elizabeth Freedman, Louise Turner, Thomas Lavstsen, Rick M. Fairhurst, Mahamadou Diakité, Steve M. Taylor
Software Mentions: 4
Published: over 3 years ago