Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: genoCN
https://packages.ecosyste.ms/registries/bioconductor.org/packages/genoCN
genotyping and copy number study tools
1 version
Latest release: 12 months ago
24,068 downloads total
Papers Mentioning genoCN 7
10.1371/journal.pone.0096841
HaplotypeCN: Copy Number Haplotype Inference with Hidden Markov Model and Localized Haplotype ClusteringCited by: 3
Author(s): Yen-Jen Lin, Yu-Tin Chen, Shu-Ni Hsu, Chieh Yu Peng, Chuan‐Yi Tang, Tzu‐Chen Yen, Wu‐Chiao Hsieh
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0153323
A Meta-Analysis of Retinoblastoma Copy Numbers Refines the List of Possible Driver Genes Involved in Tumor ProgressionCited by: 52
Author(s): Irsan Kooi, Berber M. Mol, Maarten P.G. Massink, Marcus C. de Jong, Pim de Graaf, Paul van der Valk, Hanne Meijers-Heijboer, Gertjan J. L. Kaspers, Annette C. Moll, Hein te Riele, Jacqueline Cloos, Josephine C. Dorsman
Software Mentions: 2
Published: over 8 years ago
10.1186/1471-2164-14-367
Sensitive and specific detection of mosaic chromosomal abnormalities using the Parent-of-Origin-based Detection (POD) methodCited by: 22
Author(s): Joseph D. Baugher, Benjamin Baugher, Matthew D. Shirley, Jonathan Pevsner
Software Mentions: 2
Published: over 11 years ago
10.1038/s41598-019-45281-1
NTHL1 biallelic mutations seldom cause colorectal cancer, serrated polyposis or a multi-tumor phenotype, in absence of colorectal adenomasCited by: 22
Author(s): Sami Belhadj, Isabel Quintana, Pilar Mur, Pau M. Munoz‐Torres, M. Henar Alonso, Matilde Navarro, Mariona Terradas, Virgı́nia Piñol, Joan Brunet, Vı́ctor Moreno, Conxi Lázaro, Gabriel Capellá, Laura Valle
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0045950
SNP Array Analysis Reveals Novel Genomic Abnormalities Including Copy Neutral Loss of Heterozygosity in Anaplastic OligodendrogliomasCited by: 27
Author(s): Ahmed Idbaïh, François Ducray, Caroline Dehais, Célia Courdy, Catherine Carpentier, Simon Bernard, Emmanuelle Uro‐Coste, Karima Mokhtari, Anne Jouvet, Jérôme Honnorat, Olivier Chinot, Carole Ramirez, Patrick Beauchesne, Alexandra Benouaich‐Amiel, J. Godard, Sandrine Eimer, Fabrice Parker, Emmanuèle Lechapt‐Zalcman, Philippe Colin, Delphine Loussouarn, Thierry Faillot, Phong Dam-Hieu, Selma Elouadhani-Hamdi, Luc Bauchet, Olivier Langlois, C. Le Guérinel, Denys Fontaine, Élodie Vauléon, Philippe Menei, Marie Janette Motsuo Fotso, C. Desenclos, Pierre Verelle, François Ghiringhelli, G. Noël, François Labrousse, Antoine F. Carpentier, Frédéric Dhermain, Jean‐Yves Delattre, Dominique Figarella‐Branger
Software Mentions: 1
Published: almost 12 years ago
10.1186/bcr3168
Amplification and high-level expression of heat shock protein 90 marks aggressive phenotypes of human epidermal growth factor receptor 2 negative breast cancerCited by: 131
Author(s): Qing Cheng, Jeffrey T. Chang, Joseph Geradts, Leonard Μ. Neckers, Timothy Haystead, Neil L. Spector, H. Kim Lyerly
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pcbi.1003765
Identification of Allelic Imbalance with a Statistical Model for Subtle Genomic MosaicismCited by: 7
Author(s): Rui Xia, Selina Vattathil, Paul Scheet
Software Mentions: 1
Published: about 10 years ago