Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: flowPeaks

https://packages.ecosyste.ms/registries/bioconductor.org/packages/flowPeaks

An R package for flow data clustering
1 version
Latest release: 12 months ago
2 dependent packages
27,868 downloads total

Papers Mentioning flowPeaks 11

10.1186/s40425-019-0764-0

34th Annual Meeting & Pre-Conference Programs of the Society for Immunotherapy of Cancer (SITC 2019): part 2
Cited by: 28
Author(s):
Software Mentions: 12
Published: almost 5 years ago

optimalFlow: optimal transport approach to flow cytometry gating and population matching
Cited by: 11
Author(s): Eustasio del Barrio, Hristo Inouzhe, Jean-Michel Loubès, Carlos Matrán, Agustín Mayo-Íscar
Software Mentions: 10
Published: almost 4 years ago

10.1371/journal.pone.0203247

Determination of essential phenotypic elements of clusters in high-dimensional entities—DEPECHE
Cited by: 9
Author(s): Axel Theorell, Yenan T. Bryceson, Jakob Theorell
Software Mentions: 9
Published: over 5 years ago

10.3390/vaccines8010138

From Bivariate to Multivariate Analysis of Cytometric Data: Overview of Computational Methods and Their Application in Vaccination Studies
Cited by: 12
Author(s): Simone Lucchesi, Simone Furini, Donata Medaglini, Annalisa Ciabattini
Software Mentions: 9
Published: over 4 years ago

10.3389/fimmu.2020.580373

Systems Biology Methods Applied to Blood and Tissue for a Comprehensive Analysis of Immune Response to Hepatitis B Vaccine in Adults
Cited by: 13
Author(s): Rym Ben‐Othman, Bing Cai, Aaron C. Liu, Natallia Varankovich, Daniel He, Travis M. Blimkie, Ahwon Lee, Erin E. Gill, M. A. Novotny, Brian D. Aevermann, Sibyl Drissler, Casey P. Shannon, Sarah McCann, Kim Marty, Gordean Bjornson, Rachel D. Edgar, David Lin, Nicole Gladish, Julia L. Maclsaac, Nelly Amenyogbe, Queenie Chan, Alba Llibre, Collin Joyce, Elise Landais, Khoa Le, Samantha M. Reiss, Wayne C. Koff, Colin Havenar-Daughton, Manraj K.S. Heran, Bippan S. Sangha, David R. Walt, Mel Krajden, Shane Crotty, Devin Sok, Bryan Briney, Dennis R. Burton, Darragh Duffy, Leonard J. Foster, William W. Mohn, Michael S. Kobor, Scott J. Tebbutt, Ryan R. Brinkman, Richard H. Scheuermann, Robert E. W. Hancock, Tobias R. Kollmann, Manish Sadarangani
Software Mentions: 7
Published: almost 4 years ago

10.1371/journal.pcbi.1003365

Flow Cytometry Bioinformatics
Cited by: 85
Author(s): Kieran O’Neill, Nima Aghaeepour, Josef Špidlen, Ryan R. Brinkman
Software Mentions: 7
Published: almost 11 years ago

10.1186/s12920-016-0201-x

Single and multi-subject clustering of flow cytometry data for cell-type identification and anomaly detection
Cited by: 7
Author(s): Maziyar Baran Pouyan, Vasu Jindal, Javad Birjandtalab, Mehrdad Nourani
Software Mentions: 5
Published: about 8 years ago

10.3389/fimmu.2015.00380

An Introduction to Automated Flow Cytometry Gating Tools and Their Implementation
Cited by: 56
Author(s): Chris P. Verschoor, Alina Lelic, Jonathan L. Bramson, Dawn M. E. Bowdish
Software Mentions: 5
Published: about 9 years ago

10.1186/1471-2105-15-314

A non-parametric Bayesian model for joint cell clustering and cluster matching: identification of anomalous sample phenotypes with random effects
Cited by: 36
Author(s): Murat Dündar, Ferit Akova, Halid Ziya Yerebakan, Bartek Rajwa
Software Mentions: 3
Published: about 10 years ago

10.1038/s41598-021-84765-x

Ex vivo characterization of Breg cells in patients with chronic Chagas disease
Cited by: 2
Author(s): Magali Girard, Gonzalo Raúl Acevedo, Micaela Soledad Ossowski, Marisa Fernández, Yolanda Hernández, Raúl Chadi, Karina Andrea Gómez
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0196225

Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering
Cited by: 21
Author(s): Mridul K. Thomas, Simone Fontana, Marta Reyes, Francesco Pomati
Software Mentions: 2
Published: over 6 years ago