bioconductor: edgeR | Projects | Ecosyste.ms: Papers

10.1186/s12964-020-00648-0

Alpha-1 antitrypsin deficient individuals have circulating extracellular vesicles with profibrogenic cargo
Cited by: 19
Author(s): Nazli Khodayari, Regina Oshins, L. Shannon Holliday, Virginia Clark, Qiang Xiao, George Marek, Borna Mehrad, Mark Brantly
Software Mentions: 1
Published: almost 6 years ago

10.1002/cbin.11454

ERO1L promotes NSCLC development by modulating cell cycle‐related molecules
Cited by: 6
Author(s): Xiujuan Shi, Jiawen Wu, Yi Liu, Yuxiong Jiang, Changjiang Zhi, Jue Li
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers11111634

PIK3CA Cooperates with KRAS to Promote MYC Activity and Tumorigenesis via the Bromodomain Protein BRD9
Cited by: 23
Author(s): Catherine Bell, Philipp Raffeiner, Jonathan R. Hart, Peter K. Vogt
Software Mentions: 1
Published: almost 7 years ago

10.3390/cancers12061451

RKIP Regulates Differentiation-Related Features in Melanocytic Cells
Cited by: 7
Author(s): Cristina Penas, Aintzane Apraiz, Iraia Muñoa, Yoana Arroyo-Berdugo, Javier Rasero, Pilar Ariadna Ezkurra, Verónica Velasco, Nerea Subirán, Anja‐Katrin Bosserhoff, Santos Alonso, Aintzane Asumendi, María Dolores Boyano
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers13122957

WWOX Loses the Ability to Regulate Oncogenic AP-2γ and Synergizes with Tumor Suppressor AP-2α in High-Grade Bladder Cancer
Cited by: 8
Author(s): Damian Kołat, Żaneta Kałuzińska, Andrzej K. Bednarek, Elżbieta Płuciennik
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-021-07566-6

Imprints of independent allopolyploid formations on patterns of gene expression in two sibling yarrow species (Achillea, Asteraceae)
Cited by: 2
Author(s): Duo Chen, Peiyao Yan, Yanping Guo
Software Mentions: 1
Published: over 5 years ago

10.1002/advs.202001334

Human Mesenchymal Stem Cell Derived Exosomes Enhance Cell‐Free Bone Regeneration by Altering Their miRNAs Profiles
Cited by: 120
Author(s): Mengmeng Zhai, Ye Zhu, Mingying Yang, Chuanbin Mao
Software Mentions: 1
Published: about 6 years ago

10.1128/IAI.00426-20

An Ixodes scapularis Protein Disulfide Isomerase Contributes to Borrelia burgdorferi Colonization of the Vector
Cited by: 4
Author(s): Yongguo Cao, Connor Rosen, Gunjan Arora, Akash Gupta, Carmen J. Booth, Kristen E. Murfin, Jiří Černý, Alejandro Marín López, Yu-Min Chuang, Xiao‐Tian Tang, Utpal Pal, Aaron M. Ring, Sukanya Narasimhan, Erol Fikrig
Software Mentions: 1
Published: almost 6 years ago

10.1111/acel.13466

Altered sperm tsRNAs in aged male contribute to anxiety‐like behavior in offspring
Cited by: 14
Author(s): Yi Guo, Dandan Bai, Wenqiang Liu, Yingdong Liu, Yalin Zhang, Xiaochen Kou, Jiayu Chen, Hong Wang, Xiaoming Teng, Ji Zuo, Shaorong Gao
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers13040715

SWATH-MS Based Proteomic Profiling of Prostate Cancer Cells Reveals Adaptive Molecular Mechanisms in Response to Anti-Androgen Therapy
Cited by: 8
Author(s): Chamikara Liyanage, Adil Malik, Pevindu Abeysinghe, Judith A. Clements, Jyotsna Batra
Software Mentions: 1
Published: over 5 years ago

10.1016/j.xinn.2020.100052

Regulatory Role of Retinoic Acid in Male Pregnancy of the Seahorse
Cited by: 8
Author(s): Chunyan Li, Yongxin Li, Geng Qin, Zelin Chen, Meng Qu, Bo Zhang, Xue Han, Xin Wang, Pei‐Yuan Qian, Qiang Lin
Software Mentions: 1
Published: almost 6 years ago

10.3390/insects10080245

Genome-Wide Identification of Long Non-Coding RNAs and Their Regulatory Networks Involved in Apis mellifera ligustica Response to Nosema ceranae Infection
Cited by: 30
Author(s): Dafu Chen, Huazhi Chen, Yuguang Du, Dingding Zhou, Suxia Geng, Haipeng Wang, Jieqi Wan, Chuan Xiong, Yusheng Zheng, Rui Guo
Software Mentions: 1
Published: about 7 years ago

10.3390/cancers13102346

Small RNAs in Seminal Plasma as Novel Biomarkers for Germ Cell Tumors
Cited by: 6
Author(s): Nina Mørup, Rytis Stakaitis, Ieva Golubickaitė, Meritxell Riera, Marlene Danner Dalgaard, Mikkel H. Schierup, Niels Jørgensen, Gedske Daugaard, Anders Juul, Kristian Almstrup
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers13133131

Deregulated miRNAs Contribute to Silencing of B-Cell Specific Transcription Factors and Activation of NF-κB in Classical Hodgkin Lymphoma
Cited by: 2
Author(s): Julia Paczkowska, Joanna Janiszewska, Adam Ustaszewski, Julia Bein, Marcin Skalski, Agnieszka Dzikiewicz‐Krawczyk, Natalia Rozwadowska, Martin‐Leo Hansmann, Sven Hartmann, Maciej Giefing
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers12113090

USP1 Regulates TAZ Protein Stability Through Ubiquitin Modifications in Breast Cancer
Cited by: 29
Author(s): Ashley L. Mussell, He Shen, Yanmin Chen, Michalis Mastri, Kevin H. Eng, Wiam Bshara, Costa Frangou, Jianmin Zhang
Software Mentions: 1
Published: almost 6 years ago

10.3390/insects11110816

Chemosensory-Related Gene Family Members of the Horn Fly, Haematobia irritans irritans (Diptera: Muscidae), Identified by Transcriptome Analysis
Cited by: 5
Author(s): Pia U. Olafson, Christopher Saski
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers11091273

Etiology-Specific Analysis of Hepatocellular Carcinoma Transcriptome Reveals Genetic Dysregulation in Pathways Implicated in Immunotherapy Efficacy
Cited by: 9
Author(s): Wei Tse Li, Angela E. Zou, Christine O. Honda, Hao Zheng, Xiao Qi Wang, Tatiana Kisseleva, Eric Y. Chang, Weg M. Ongkeko
Software Mentions: 1
Published: about 7 years ago

10.1111/acel.13115

A lncRNA survey finds increases in neuroprotective LINC‐PINT in Parkinson’s disease <i>substantia nigra</i>
Cited by: 37
Author(s): Alon Simchovitz, Mor Hanan, Nadav Yayon, Songhua Lee, Estelle R. Bennett, David Greenberg, Sebastián Kadener, Hermona Soreq
Software Mentions: 1
Published: over 6 years ago

10.3390/insects12030209

Antennal Transcriptome Analysis and Identification of Candidate Chemosensory Genes of the Harlequin Ladybird Beetle, Harmonia axyridis (Pallas) (Coleoptera: Coccinellidae)
Cited by: 11
Author(s): Gabriele Rondoni, Alessandro Roman, Camille Meslin, Nicolas Montagné, Eric Conti, Emmanuelle Jacquin‐Joly
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers11121919

The Landscape of Long Non-Coding RNA Dysregulation and Clinical Relevance in Muscle Invasive Bladder Urothelial Carcinoma
Cited by: 4
Author(s): Haotian Shen, Lauren Wong, Wei Tse Li, Megan Chu, Rachel High, Eric Y. Chang, Jessica Wang‐Rodriguez, Weg M. Ongkeko
Software Mentions: 1
Published: almost 7 years ago

10.1172/jci.insight.89631

Plasma vesicle miRNAs for therapy response monitoring in Hodgkin lymphoma patients
Cited by: 113
Author(s): Monique A.J. van Eijndhoven, Josée M. Zijlstra, Nils J. Groenewegen, Esther E.E. Drees, Stuart van Niele, S. Rubina Baglio, Danijela Koppers-Lalić, Hans van der Voorn, Sten F. W. M. Libregts, Marca H. M. Wauben, Renée X. de Menezes, Jan R.T. van Weering, Rienk Nieuwland, Lydia Visser, Anke van den Berg, Daphne de Jong, D. Michiel Pegtel
Software Mentions: 1
Published: almost 10 years ago

10.3390/cancers13153812

A Yes-Associated Protein (YAP) and Insulin-Like Growth Factor 1 Receptor (IGF-1R) Signaling Loop Is Involved in Sorafenib Resistance in Hepatocellular Carcinoma
Cited by: 9
Author(s): Mai Huong Thi Ngo, Sue Wei Peng, Yung Che Kuo, Chun‐Yen Lin, Ming–Heng Wu, Chia Hsien Chuang, Cheng Xiang Kao, Han Yin Jeng, Gee Way Lin, Thai-Yen Ling, Te‐Sheng Chang, Yen Hua Huang
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms18102119

Transforming Growth Factor-β Drives the Transendothelial Migration of Hepatocellular Carcinoma Cells
Cited by: 16
Author(s): Petra Koudelková, Victor Costina, Gerhard Weber, Steven Dooley, Peter Findeisen, Peter Winter, Rahul Agarwal, Karin Schlangen, Wolfgang Mikulits
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijms18112253

Comparative Transcriptomic Analysis Reveals Candidate Genes and Pathways Involved in Larval Settlement of the Barnacle Megabalanus volcano
Cited by: 11
Author(s): Guoyong Yan, Gen Zhang, Junzhe Huang, Yi Lan, Jin Sun, Cong Zeng, Yong Wang, Pei‐Yuan Qian, Lisheng He
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijms18112433

RNA Sequencing and Coexpression Analysis Reveal Key Genes Involved in α-Linolenic Acid Biosynthesis in Perilla frutescens Seed
Cited by: 24
Author(s): Tianyuan Zhang, Chi Song, Li Song, Shang ZhiWei, Sen Yang, Dong Zhang, Wei Sun, Qi Shen, Degang Zhao
Software Mentions: 1
Published: almost 9 years ago

10.3390/cancers13153854

Quantitative Assessment and Prognostic Associations of the Immune Landscape in Ovarian Clear Cell Carcinoma
Cited by: 9
Author(s): Saira Khalique, Sarah H. Nash, David Mansfield, Julian Wampfler, Ayoma D. Attygale, Katherine Vroobel, Harriet Kemp, Richard Buus, Hannah Cottom, Ioannis Roxanis, Thomas R. Jones, Katharina von Loga, Dipa Begum, Naomi Guppy, Pradeep Ramagiri, Kerry Fenwick, Nik Matthews, Michael Hubank, Christopher J. Lord, Syed Haider, Alan Melcher, Susana Banerjee, Rachael Natrajan
Software Mentions: 1
Published: about 5 years ago

10.1186/s13018-021-02508-0

Cornuside I promoted osteogenic differentiation of bone mesenchymal stem cells through PI3K/Akt signaling pathway
Cited by: 5
Author(s): Feng Gao, Shuhua Xia, Xiuhui Wang, Xiaoxiao Zhou, Jun Wang
Software Mentions: 1
Published: about 5 years ago

10.1172/jci.insight.143023

Shifting osteogenesis in vascular calcification
Cited by: 11
Author(s): Jiayi Yao, Xinhui Wu, Xuguang Qiao, Daoqin Zhang, Li Zhang, Jocelyn Ma, Xinjiang Cai, Kristina I. Boström, Yucheng Yao
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers12020339

TGF-Beta-Activated Cancer-Associated Fibroblasts Limit Cetuximab Efficacy in Preclinical Models of Head and Neck Cancer
Cited by: 37
Author(s): Ksenia M. Yegodayev, Ofra Novoplansky, Artemiy Golden, Manu Prasad, Liron Levin, Sankar Jagadeeshan, Jonathan Zorea, Orr Dimitstein, Ben‐Zion Joshua, Limor Cohen, Ekaterina Khrameeva, Moshe Elkabets
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0158711

Transition of an Anaerobic Escherichia coli Culture to Aerobiosis: Balancing mRNA and Protein Levels in a Demand-Directed Dynamic Flux Balance Analysis
Cited by: 14
Author(s): Joachim von Wulffen, RecogNice-Team, Oliver Sawodny, Ronny Feuer
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0073783

Inducible Knockdown of Plasmodium Gene Expression Using the glmS Ribozyme
Cited by: 190
Author(s): Parichat Prommana, Chairat Uthaipibull, Chayaphat Wongsombat, Sumalee Kamchonwongpaisan, Yongyuth Yuthavong, Ellen Knuepfer, Anthony A. Holder, Philip Shaw
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0174892

Changes in circulating microRNA levels can be identified as early as day 8 of pregnancy in cattle
Cited by: 29
Author(s): Jason Ioannidis, F.X. Donadeu
Software Mentions: 1
Published: over 9 years ago

10.1186/s12864-019-5741-y

Identification of stable QTLs and candidate genes involved in anaerobic germination tolerance in rice via high-density genetic mapping and RNA-Seq
Cited by: 35
Author(s): Jing Yang, Kai Sun, Dongxiu Li, Lixin Luo, Yongzhu Liu, Ming Huang, Gangyi Yang, Hong Liu, Hui Wang, Zhiqiang Chen, Tao Guo
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0182866

IFNAR2-dependent gene expression profile induced by IFN-α in Pteropus alecto bat cells and impact of IFNAR2 knockout on virus infection
Cited by: 25
Author(s): Qian Zhang, Leiping Zeng, Peng Zhou, Aaron T. Irving, Shang Li, Shi Z, Lin‐Fa Wang
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0214526

Bacterial translocation in acute lymphocytic leukemia
Cited by: 7
Author(s): Yajing Song, Péter Gyarmati
Software Mentions: 1
Published: over 7 years ago

10.1021/acs.jafc.1c00130

<sup>1</sup>H NMR Metabolomics and Full-Length RNA-Seq Reveal Effects of Acylated and Nonacylated Anthocyanins on Hepatic Metabolites and Gene Expression in Zucker Diabetic Fatty Rats
Cited by: 8
Author(s): Kang Chen, Xuetao Wei, Raghunath Pariyani, Maaria Kortesniemi, Yumei Zhang, Baoru Yang
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jaci.2016.05.031

Tumor progression locus 2 reduces severe allergic airway inflammation by inhibiting Ccl24 production in dendritic cells
Cited by: 9
Author(s): Yashaswini Kannan, Yanda Li, Stephanie M. Coomes, Isobel Okoye, Victoria S. Pelly, Srividya Sriskantharajah, Eva Gückel, Lauren M. Webb, Stephanie Czieso, Nikolay P. Nikolov, Andrew S. MacDonald, Steven C. Ley, Mark S. Wilson
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0022953

Differential Gene Expression in the Siphonophore Nanomia bijuga (Cnidaria) Assessed with Multiple Next-Generation Sequencing Workflows
Cited by: 42
Author(s): Stefan Siebert, Mark D. Robinson, Sophia C. Tintori, Freya Goetz, Rebecca R. Helm, Stephen A. Smith, Nathan C. Shaner, Steven H. D. Haddock, Casey W. Dunn
Software Mentions: 1
Published: about 15 years ago

10.1186/s40104-017-0202-4

Evaluation of fatty acid metabolism and innate immunity interactions between commercial broiler, F1 layer × broiler cross and commercial layer strains selected for different growth potentials
Cited by: 8
Author(s): Nicky‐Lee Willson, R. E. A. Forder, Rick Tearle, G. S. Nattrass, Robert J. Hughes, P. I. Hynd
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0178119

Gene expression analysis of rocket salad under pre-harvest and postharvest stresses: A transcriptomic resource for Diplotaxis tenuifolia
Cited by: 23
Author(s): Marina Cavaiuolo, Giacomo Cocetta, Natasha D. Spadafora, Carsten T. Müller, Hilary J. Rogers, António Ferrante
Software Mentions: 1
Published: over 9 years ago

10.1186/s12864-015-2268-8

Transcriptome profiling and validation of gene based single nucleotide polymorphisms (SNPs) in sorghum genotypes with contrasting responses to cold stress
Cited by: 55
Author(s): Ratan Chopra, Gloria Burow, Chad Hayes, Yves Emendack, Zhanguo Xin, John J. Burke
Software Mentions: 1
Published: almost 11 years ago

10.1093/jac/dkaa296

A genome-wide analysis of Escherichia coli responses to fosfomycin using TraDIS-Xpress reveals novel roles for phosphonate degradation and phosphate transport systems
Cited by: 13
Author(s): A. Keith Turner, Muhammad Yasir, Sarah Bastkowski, Andrea Telatin, Andrew J. Page, Ian G. Charles, Mark A. Webber
Software Mentions: 1
Published: about 6 years ago

10.1002/path.5551

Large‐scale analysis of <scp>BAP1</scp> expression reveals novel associations with clinical and molecular features of malignant pleural mesothelioma
Cited by: 22
Author(s): Assunta De Rienzo, Lucian R. Chirieac, Yin P. Hung, David T. Severson, Samuel Freyaldenhoven, Corinne E. Gustafson, Nhien Dao, Claire Meyerovitz, Michela E Oster, Roderick V. Jensen, Beow Y. Yeap, Raphael Bueno, William G. Richards
Software Mentions: 1
Published: almost 6 years ago

10.1074/jbc.M116.733733

miR-30 Family Controls Proliferation and Differentiation of Intestinal Epithelial Cell Models by Directing a Broad Gene Expression Program That Includes SOX9 and the Ubiquitin Ligase Pathway
Cited by: 33
Author(s): Bailey C. E. Peck, John Sincavage, Sydney Feinstein, Amanda T. Mah, James G. Simmons, P. Kay Lund, Praveen Sethupathy
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0194998

Homozygous KSR1 deletion attenuates morbidity but does not prevent tumor development in a mouse model of RAS-driven pancreatic cancer
Cited by: 4
Author(s): Elizabeth Germino, Joe Miller, Lauri Diehl, Carter J. Swanson, Steffen Durinck, Zora Modrušan, Jeffrey H. Miner, Andréy S. Shaw
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19030852

Transcriptome Analysis Identifies a 140 kb Region of Chromosome 3B Containing Genes Specific to Fusarium Head Blight Resistance in Wheat
Cited by: 13
Author(s): Xin Li, Shengyi Zhong, Wanquan Chen, Syeda Akash Fatima, Qianglan Huang, Qing Li, Feiquan Tan, Peigao Luo
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19030910

In-Silico Integration Approach to Identify a Key miRNA Regulating a Gene Network in Aggressive Prostate Cancer
Cited by: 11
Author(s): Claudia Cava, Gloria Bertoli, Antonio Colaprico, Gianluca Bontempi, Giancarlo Mauri, Isabella Castiglioni
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0130500

A de novo Assembly of the Common Frog (Rana temporaria) Transcriptome and Comparison of Transcription Following Exposure to Ranavirus and Batrachochytrium dendrobatidis
Cited by: 32
Author(s): Stephen J. Price, Trenton W. J. Garner, François Balloux, Chris Ruis, Konrad Paszkiewicz, Karen Moore, Alistair Griffiths
Software Mentions: 1
Published: about 11 years ago

10.1074/jbc.RA120.015877

Elongin A associates with actively transcribed genes and modulates enhancer RNA levels with limited impact on transcription elongation rate in vivo
Cited by: 13
Author(s): M. Behfar Ardehali, Manashree Damle, Carlos Perea-Resa, Michael D. Blower, Robert E. Kingston
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.100403

Targeting primary and metastatic uveal melanoma with a G protein inhibitor
Cited by: 20
Author(s): Michael D. Onken, Carol M. Makepeace, Kevin M. Kaltenbronn, Joelle Choi, Leonel F. Hernandez‐Aya, Katherine N. Weilbaecher, Kisha Piggott, P. Kumar Rao, Carla M. Yuede, Alethia J. Dixon, Patrick Osei‐Owusu, John A. Cooper, Kendall J. Blumer
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-021-07751-7

Transcriptomic analysis of shell repair and biomineralization in the blue mussel, Mytilus edulis
Cited by: 9
Author(s): Tejaswi Yarra, Kirti Ramesh, Mark Blaxter, Anne Hüning, Frank Melzner, Melody S. Clark
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0072302

Effect of Maternal Methionine Supplementation on the Transcriptome of Bovine Preimplantation Embryos
Cited by: 74
Author(s): Francisco Peñagaricano, A. H. Souza, P.D. Carvalho, Ashley M. Driver, Gambra Rocio, Jenna Kropp Schmidt, Katherine S. Hackbart, D. Luchini, R.D. Shaver, Milo C. Wiltbank, Hasan Khatib
Software Mentions: 1
Published: about 13 years ago

10.1186/s12864-019-6351-4

Comparative transcriptomic analysis of surf clams (Paphia undulate) infected with two strains of Vibrio spp. reveals the identity of key immune genes involved in host defense
Cited by: 6
Author(s): Mingjia Yu, Lin Zheng, Xiaobo Wang, Min-Fu Wu, Ming Qi, Wei Fu, Yang Zhang
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0162390

Type 3 Fimbriae Encoded on Plasmids Are Expressed from a Unique Promoter without Affecting Host Motility, Facilitating an Exceptional Phenotype That Enhances Conjugal Plasmid Transfer
Cited by: 16
Author(s): Jonas Stenløkke Madsen, Leise Riber, Witold Kot, Alrun Basfeld, Mette Burmølle, Lars Hestbjerg Hansen, Søren J. Sørensen
Software Mentions: 1
Published: almost 10 years ago

10.1016/j.jbc.2021.101156

Iron loading induces cholesterol synthesis and sensitizes endothelial cells to TNFα-mediated apoptosis
Cited by: 9
Author(s): Allison L. Fisher, Daniel N. Srole, Nicolaos Palaskas, David Meriwether, Srinivasa T. Reddy, Tomas Ganz, Elizabeta Nemeth
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12929-018-0477-6

Differential genome-wide profiling of alternative polyadenylation sites in nasopharyngeal carcinoma by high-throughput sequencing
Cited by: 7
Author(s): Ya Xu, Ying Qing Li, Na Liu, Qiuming He, Xin Tang, Xin Wen, Xiao Yang, Ying Sun, Ling TANG
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijms19061810

Differential Expression and Pathway Analysis in Drug-Resistant Triple-Negative Breast Cancer Cell Lines Using RNASeq Analysis
Cited by: 22
Author(s): Safa Shaheen, Febin Fawaz, Shaheen Shah, Dietrich Büsselberg
Software Mentions: 1
Published: about 8 years ago

10.3390/ijms19061594

Candidate Genes for Yellow Leaf Color in Common Wheat (Triticum aestivum L.) and Major Related Metabolic Pathways according to Transcriptome Profiling
Cited by: 58
Author(s): Hui-Yu Wu, Narong Shi, Xuyao An, Liu Cong, Hongfei Fu, Lanqing Cao, Yi Feng, Dianjun Sun, Lingli Zhang
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0200732

Comparison of transcriptomic landscapes of different lamb muscles using RNA-Seq.
Cited by: 7
Author(s): E. Armstrong, Andrés Iriarte, P. Nicolini, Jorge De los Santos, J. Ithurralde, Alejandro Bielli, G. Bianchi, Francisco Peñagaricano
Software Mentions: 1
Published: about 8 years ago

10.7150/jca.33157

Establishment and Characterization of a CTC Cell Line from Peripheral Blood of Breast Cancer Patient
Cited by: 19
Author(s): Pan Zhao, Weiping Zhou, Chang Liu, Huirong Zhang, Zhiqiang Cheng, Weiqing Wu, Kaisheng Liu, Hong Hu, Caineng Zhong, Yayuan Zhang, Dongxian Zhou, Feiyuan Liu, Yong Dai, Jianhong Wang, Chang Zou
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0247888

Transcriptional analysis of islets of Langerhans from organ donors of different ages
Cited by: 8
Author(s): Peter Seiron, Anton Stenwall, A. Hedin, Louise Granlund, Jonathan L.S. Esguerra, Petr Volkov, Erik Renström, Olle Korsgren, Marcus Lundberg, Oskar Skog
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0100839

Tissue-Specific Expressed Antibody Variable Gene Repertoires
Cited by: 34
Author(s): Bryan Briney, Jordan R. Willis, Jessica A. Finn, Brett A. McKinney, James E. Crowe
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0215122

Calcium-induced differentiation in normal human colonoid cultures: Cell-cell / cell-matrix adhesion, barrier formation and tissue integrity
Cited by: 24
Author(s): Durga Attili, Shannon D. McClintock, Areeba H. Rizvi, Shailja Pandya, Humza Rehman, Daniyal M. Nadeem, Aliah Richter, Dafydd G. Thomas, Michael K. Dame, D. Kim Turgeon, James Varani, Muhammad N. Aslam
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms19061626

Oxaloacetate Ameliorates Chemical Liver Injury via Oxidative Stress Reduction and Enhancement of Bioenergetic Fluxes
Cited by: 19
Author(s): Ye Kuang, Xing Han, Mu Xu, Yue Wang, Yuxiang Zhao, Qing Yang
Software Mentions: 1
Published: over 8 years ago

10.7150/jca.37267

Overexpression of DUSP6 enhances chemotherapy-resistance of ovarian epithelial cancer by regulating the ERK signaling pathway
Cited by: 17
Author(s): Yan Gao, Hui Li, Qing Han, Yuan Li, Tongxia Wang, Cuiyu Huang, Youdong Mao, Xi Wang, Qun Zhang, Tian Jing, David M. Irwin, Tan H, Hongyan Guo
Software Mentions: 1
Published: over 6 years ago

10.1111/acel.12743

<scp>NHR</scp>‐49/<scp>HNF</scp>4 integrates regulation of fatty acid metabolism with a protective transcriptional response to oxidative stress and fasting
Cited by: 61
Author(s): Grace Ying Shyen Goh, Johnathan J Winter, Forum Bhanshali, Kelsie R. S. Doering, Regina Lai, Kayoung Lee, Elizabeth A. Veal, Stefan Taubert
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0170085

Differential DNA Methylation Regions in Adult Human Sperm following Adolescent Chemotherapy: Potential for Epigenetic Inheritance
Cited by: 39
Author(s): Margarett Shnorhavorian, Stephen M. Schwartz, Barbara Stansfeld, Ingrid Sadler‐Riggleman, Daniel Beck, Michael K. Skinner
Software Mentions: 1
Published: over 9 years ago

Projects: bioconductor: edgeR

Science Score: 100/100

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Papers Mentioning edgeR 6,568