Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: cellHTS2
https://packages.ecosyste.ms/registries/bioconductor.org/packages/cellHTS2
Analysis of cell-based screens - revised version of cellHTS
1 version
Latest release: about 1 year ago
4 dependent packages
56,612 downloads total
Papers Mentioning cellHTS2 25
10.1534/genetics.117.300077
RNA Interference (RNAi) Screening in<i>Drosophila</i>Cited by: 86
Author(s): Florian Heigwer, Fillip Port, Michael Boutros
Software Mentions: 4
Published: almost 7 years ago
10.1371/journal.ppat.1007601
RNAi-based small molecule repositioning reveals clinically approved urea-based kinase inhibitors as broadly active antiviralsCited by: 25
Author(s): Markus Lesch, Madlen Luckner, Michaël Meyer, Friderike Weege, Isabella Gravenstein, Martin Raftery, Christian Sieben, Laura Martin-Sancho, Aki Imai-Matsushima, Robert-William Welke, Rebecca Frise, William Barclay, Günther Schönrich, Andreas Herrmann, Thomas Meyer, Alexander Karlas
Software Mentions: 3
Published: almost 6 years ago
10.1038/s41418-018-0080-0
A kinome-wide RNAi screen identifies ALK as a target to sensitize neuroblastoma cells for HDAC8-inhibitor treatmentCited by: 20
Author(s): Jing Shen, Sara Najafi, Sina Stäble, Johannes Fabian, E Koeneke, Fiona R. Kolbinger, Jagoda K. Wrobel, Benjamin Meder, Martin Distel, Tino Heimburg, Wolfgang Sippl, Manfred Jung, Heike Peterziel, D Kranz, Michael Boutros, Frank Westermann, Olaf Witt, Ina Oehme
Software Mentions: 3
Published: almost 7 years ago
10.1186/1471-2105-11-185
web cellHTS2: A web-application for the analysis of high-throughput screening dataCited by: 60
Author(s): Oliver Pelz, Moritz Gilsdorf, Michael Boutros
Software Mentions: 2
Published: over 14 years ago
10.1371/journal.pgen.1006861
Splicing stimulates siRNA formation at Drosophila DNA double-strand breaksCited by: 16
Author(s): Karin Merk, Marco Breinig, Romy Böttcher, Stefan Krebs, Helmut Blum, Michael Boutros, Klaus Förstemann
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0036594
High Throughput Screening for Small Molecule Enhancers of the Interferon Signaling Pathway to Drive Next-Generation Antiviral Drug DiscoveryCited by: 44
Author(s): Dhara A. Patel, Anand C. Patel, William C. Nolan, Yong Zhang, Michael J. Holtzman
Software Mentions: 2
Published: over 12 years ago
10.15252/emmm.201404414
A high‐throughput <scp>RNA</scp> i screen for detection of immune‐checkpoint molecules that mediate tumor resistance to cytotoxic T lymphocytesCited by: 35
Author(s): Nisit Khandelwal, Marco Breinig, Tobias Speck, Tillmann Michels, Christiane Kreutzer, Antonio Sorrentino, Ashwini Kumar Sharma, Ludmila Umansky, Heinke Conrad, Isabel Poschke, Rienk Offringa, Rainer König, Helga Bernhard, Arthur Machlenkin, Michael Boutros, Philipp Beckhove
Software Mentions: 2
Published: almost 10 years ago
10.15252/emmm.201707691
Spironolactone is an antagonist of <scp>NRG</scp> 1‐ <scp>ERBB</scp> 4 signaling and schizophrenia‐relevant endophenotypes in miceCited by: 28
Author(s): Michael C. Wehr, Wilko Hinrichs, Magdalena M. Brzózka, Tilmann Unterbarnscheidt, Alexander Herholt, Jan P. Wintgens, Sergi Papiol, María Clara Soto-Bernardini, Mykola Kravchenko, Mingyue Zhang, Klaus‐Armin Nave, Sven P. Wichert, Peter Falkai, Weiqi Zhang, Markus H. Schwab, Moritz J. Rossner
Software Mentions: 2
Published: over 7 years ago
10.1038/sdata.2017.22
Image-based siRNA screen to identify kinases regulating Weibel-Palade body size control using electroporationCited by: 9
Author(s): Robin Ketteler, Jamie Freeman, Francesco Ferraro, Nicole Bata, Daniel F. Cutler, János Kriston-Vizi, Nicola Stevenson
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0054477
ZNF-Mediated Resistance to Imatinib Mesylate in Gastrointestinal Stromal TumorCited by: 17
Author(s): Lori Rink, Michael F. Ochs, Yan Zhou, Margaret von Mehren, Andrew K. Godwin
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0028338
A Novel Multiplex Cell Viability Assay for High-Throughput RNAi ScreeningCited by: 38
Author(s): Daniel F. Gilbert, Gerrit Erdmann, Xian Zhang, Anja Fritzsche, Kubilay Demir, Andreas Jaedicke, Katja Muehlenberg, Erich E. Wanker, Michael Boutros
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0031193
Identification of New Genes Involved in Human Adipogenesis and Fat StorageCited by: 43
Author(s): Jörn Söhle, Nikolaus Machuy, Elma Smailbegovic, Ursula Holtzmann, Elke Grönniger, Horst Wenck, Franz Stäb, Marc Winnefeld
Software Mentions: 1
Published: almost 13 years ago
10.1371/journal.pone.0018261
RNAi-Based Screening Identifies Kinases Interfering with Dioxin-Mediated Up-Regulation of CYP1A1 ActivityCited by: 18
Author(s): David Gilot, Nolwenn Le Meur, Fanny Giudicelli, Marc Le Vée, Dominique Lagadic‐Gossmann, Nathalie Théret, Olivier Fardel
Software Mentions: 1
Published: almost 14 years ago
10.1016/j.stemcr.2017.08.023
An RNAi Screen Reveals an Essential Role for HIPK4 in Human Skin Epithelial Differentiation from iPSCsCited by: 7
Author(s): Lionel Larribère, Marta Galach, Daniel Novak, Karla Arévalo, Hans Christian Volz, Hans Jürgen Stark, Petra Boukamp, Michael Boutros, Jochen Utikal
Software Mentions: 1
Published: about 7 years ago
10.1093/jmcb/mjy063
Assembly of a parts list of the human mitotic cell cycle machineryCited by: 54
Author(s): Bruno Giotti, Sz-Hau Chen, Mark W. Barnett, Tim Regan, Tony Ly, Stefan Wiemann, David Hume, Tom C. Freeman
Software Mentions: 1
Published: about 6 years ago
10.3390/v11020176
Identification of Broad-Spectrum Antiviral Compounds by Targeting Viral EntryCited by: 45
Author(s): Michela Mazzon, Ana Maria Ortega-Prieto, Douglas Imrie, Christin Luft, Lena Hess, Stephanie Czieso, Joe Grove, Jessica Katy Skelton, Laura Farleigh, Joachim Jakob Bugert, Edward Wright, Nigel Temperton, Richard Angell, Sally Oxenford, Michael Jacobs, Robin Ketteler, Marcus Dorner, Mark Marsh
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13073-015-0170-2
Functional fingerprinting of human mesenchymal stem cells using high-throughput RNAi screeningCited by: 4
Author(s): Gerrit Erdmann, Michael Suchanek, Patrick Horn, Fritz Graf, Christian Volz, Thomas Horn, Xian Zhang, Wolfgang Wagner, Anthony D. Ho, Michael Boutros
Software Mentions: 1
Published: over 9 years ago
10.1186/1471-2164-13-506
Advances in genome-wide RNAi cellular screens: a case study using the Drosophila JAK/STAT pathwayCited by: 22
Author(s): Katherine H. Fisher, Victoria M Wright, Amy Taylor, Martin P. Zeidler, Stephen Brown
Software Mentions: 1
Published: over 12 years ago
10.1038/sdata.2015.20
Genome-wide RNAi screen for synthetic lethal interactions with the C. elegans kinesin-5 homolog BMK-1Cited by: 9
Author(s): André F. Maia, Marvin E. Tanenbaum, Matilde Galli, Daphne Lelieveld, David A. Egan, Reto Gassmann, Cláudio E. Sunkel, Sander van den Heuvel, René H. Medema
Software Mentions: 1
Published: over 9 years ago
10.1111/jth.15084
Modulation of endothelial organelle size as an antithrombotic strategyCited by: 13
Author(s): Francesco Ferraro, Francesca Patella, Joana R. Costa, Robin Ketteler, János Kriston-Vizi, Daniel F. Cutler
Software Mentions: 1
Published: about 4 years ago
10.1038/srep05285
A method to identify and validate mitochondrial modulators using mammalian cells and the worm C. elegansCited by: 43
Author(s): Pénélope Andreux, Laurent Mouchiroud, Xu Wang, Virginija Jovaisaite, Adrienne Mottis, Sabrina Bichet, Norman Moullan, Riekelt H. Houtkooper, Johan Auwerx
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0013177
RNAi Screen Indicates Widespread Biological Function for Human Natural Antisense TranscriptsCited by: 33
Author(s): Mohammad Ali Faghihi, Jannet Kocerha, Farzaneh Modarresi, Pär G. Engström, Alistair M. Chalk, Eric Koesema, Georges St. Laurent, Claes Wahlestedt
Software Mentions: 1
Published: about 14 years ago
10.1371/journal.pone.0049386
GUItars: A GUI Tool for Analysis of High-Throughput RNA Interference Screening DataCited by: 16
Author(s): Asli N. Goktug, Su Sien Ong, Taosheng Chen
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0144126
A Synthetic Lethality Screen Using a Focused siRNA Library to Identify Sensitizers to Dasatinib Therapy for the Treatment of Epithelial Ovarian CancerCited by: 26
Author(s): Harsh B. Pathak, Yan Zhou, Geetika Sethi, Jeff Hirst, Russell J. Schilder, Erica A. Golemis, Andrew K. Godwin
Software Mentions: 1
Published: about 9 years ago