Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: atSNP

https://packages.ecosyste.ms/registries/bioconductor.org/packages/atSNP

Affinity test for identifying regulatory SNPs
1 version
Latest release: about 1 year ago
4,907 downloads total

Papers Mentioning atSNP 5

10.1186/s13059-021-02450-8
INFIMA leverages multi-omics model organism data to identify effector genes of human GWAS variants
Cited by: 3
Author(s): Chenyang Dong, Shane P. Simonett, Sun‐Young Shin, Donnie S. Stapleton, Kathryn L. Schueler, Gary A. Churchill, Leina Lu, Huan Liu, Fulai Jin, Yan Li, Alan D. Attie, Mark P. Keller, Sündüz Keleş
Software Mentions: 7
Published: about 3 years ago
10.1371/journal.pgen.1007785
Genetic variants influence on the placenta regulatory landscape
Cited by: 48
Author(s): Fabien Delahaye, Catherine Do, Yu Kong, Remi Ashkar, Martha Salas, Benjamin Tycko, Ronald J. Wapner, Francine Hughes
Software Mentions: 4
Published: almost 6 years ago
10.3390/biology10080790
agReg-SNPdb: A Database of Regulatory SNPs for Agricultural Animal Species
Cited by: 5
Author(s): Selina Klees, Felix Heinrich, Armin O. Schmitt, Mehmet Gültaş
Software Mentions: 3
Published: about 3 years ago
10.3389/fgene.2019.00282
BayesPI-BAR2: A New Python Package for Predicting Functional Non-coding Mutations in Cancer Patient Cohorts
Cited by: 4
Author(s): Kirill Batmanov, Jan Delabie, Junbai Wang
Software Mentions: 1
Published: over 5 years ago
10.1186/s13059-020-02059-3
Allele-specific DNA methylation is increased in cancers and its dense mapping in normal plus neoplastic cells increases the yield of disease-associated regulatory SNPs
Cited by: 17
Author(s): Catherine Do, Emmanuel Dumont, Martha Salas, Angelica Castano, Huthayfa Mujahed, Leonel Maldonado, Arunjot Singh, Sonia DaSilva-Arnold, Govind Bhagat, Soren Lehman, Angela M. Christiano, Subha Madhavan, Péter L. Nagy, Peter H.R. Green, Rena Feinman, Cornelia L. Trimble, Nicholas P. Illsley, Karen Marder, Lawrence S. Honig, Catherine Monk, André Goy, Kar Fai Chow, Samuel Goldlust, George J. Kaptain, David S. Siegel, Benjamin Tycko
Software Mentions: 1
Published: over 4 years ago