Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: arrayQuality

https://packages.ecosyste.ms/registries/bioconductor.org/packages/arrayQuality

Assessing array quality on spotted arrays
1 version
Latest release: 7 months ago
58,187 downloads total

Papers Mentioning arrayQuality 10

10.1371/journal.pone.0052021

Prospective Transcriptomic Pathway Analysis of Human Lymphatic Vascular Insufficiency: Identification and Validation of a Circulating Biomarker Panel
Cited by: 46
Author(s): Shin Lin, Jeanna Kim, Mi-Joung Lee, Leslie Roche, Nancy L. Yang, Philip S. Tsao, Stanley G. Rockson
Software Mentions: 4
Published: over 11 years ago

10.1371/journal.pone.0051013

A Measure of the Signal-to-Noise Ratio of Microarray Samples and Studies Using Gene Correlations
Cited by: 15
Author(s): David Venet, Vincent Detours, Hugues Bersini
Software Mentions: 4
Published: over 11 years ago

10.1186/1475-2867-9-12

Gene expression profiling predicts a three-gene expression signature of endometrial adenocarcinoma in a rat model
Cited by: 9
Author(s): Sandra Karlsson, Björn Olsson, Karin Klinga‐Levan
Software Mentions: 3
Published: over 15 years ago

10.1371/journal.pcbi.1000786

Making Informed Choices about Microarray Data Analysis
Cited by: 56
Author(s): Mark Reimers
Software Mentions: 2
Published: almost 14 years ago

10.1371/journal.pone.0055603

Lasting Effects on Body Weight and Mammary Gland Gene Expression in Female Mice upon Early Life Exposure to n-3 but Not n-6 High-Fat Diets
Cited by: 9
Author(s): Mirjam Luijten, Amar V. Singh, Caleb A. Bastian, Anja Westerman, M. Michele Pisano, Jeroen L. A. Pennings, Aart Verhoef, Maia L. Green, Aldert H. Piersma, Annemieke de Vries, Thomas B. Knudsen
Software Mentions: 2
Published: over 11 years ago

10.1186/1755-8794-4-27

Discriminating lymphomas and reactive lymphadenopathy in lymph node biopsies by gene expression profiling
Cited by: 24
Author(s): To Ha Loi, Anna Campain, Adam Bryant, Tim Molloy, Mark Lutherborrow, Jennifer Turner, Jean Yee Hwa Yang, D. F. David
Software Mentions: 2
Published: about 13 years ago

10.1186/1752-0509-2-16

Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants
Cited by: 102
Author(s): David J. Weston, Lee E. Gunter, Alistair Rogers, Stan D. Wullschleger
Software Mentions: 2
Published: over 16 years ago

10.1186/s12957-017-1211-7

Identification of key lncRNAs in colorectal cancer progression based on associated protein–protein interaction analysis
Cited by: 23
Author(s): Haishan Zhu, Jiajing Yu, Haifeng Zhu, Yusheng Guo, Sheng-Ya Feng
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pbio.0050090

Transcript Specificity in Yeast Pre-mRNA Splicing Revealed by Mutations in Core Spliceosomal Components
Cited by: 186
Author(s): Jeffrey A. Pleiss, Gregg B. Whitworth, Megan Bergkessel, Christine Guthrie
Software Mentions: 1
Published: about 17 years ago

10.1186/s13058-015-0582-3

Serial expression analysis of breast tumors during neoadjuvant chemotherapy reveals changes in cell cycle and immune pathways associated with recurrence and response
Cited by: 53
Author(s): Mark Jesus M. Magbanua, Denise M. Wolf, Christina Yau, Sarah E. Davis, Julia Crothers, Alfred Au, Christopher M. Haqq, Chad Livasy, Hope S. Rugo, Laura J. Esserman, John W. Park, Laura J. van ’t Veer
Software Mentions: 1
Published: almost 9 years ago