Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: YAPSA

https://packages.ecosyste.ms/registries/bioconductor.org/packages/YAPSA

Yet Another Package for Signature Analysis
1 version
Latest release: about 1 year ago
14,034 downloads total

Papers Mentioning YAPSA 5

Computational tools to detect signatures of mutational processes in DNA from tumours: A review and empirical comparison of performance
Cited by: 42
Author(s): Hanane Omichessan, Gianluca Severi, Vittorio Perduca
Software Mentions: 9
Published: about 5 years ago

10.1371/journal.pone.0234505

Comparative genomics of high grade neuroendocrine carcinoma of the cervix
Cited by: 21
Author(s): R. Tyler Hillman, Robert J. Cardnell, Junya Fujimoto, Won Chul Lee, Jianjun Zhang, Lauren A. Byers, Preetha Ramalingam, Mario M. Leitao, Elizabeth M. Swisher, P. Andrew Futreal, Michael Frumovitz
Software Mentions: 5
Published: over 4 years ago

10.1038/s41408-021-00493-5

Genomic insights into the pathogenesis of Epstein–Barr virus-associated diffuse large B-cell lymphoma by whole-genome and targeted amplicon sequencing
Cited by: 17
Author(s): Niklas Gebauer, Axel Künstner, Julius Ketzer, Hanno M Witte, Tobias Rausch, Vladimír Beneš, Jürgen Zimmermann, Judith Gebauer, Hartmut Merz, Veronica Bernard, Lana Harder, Katharina Ratjen, Stefan Gesk, Wolfgang Peter, Yannik Busch, Peter Trojok, Nikolas von Bubnoff, Harald Biersack, Hauke Busch, Alfred C. Feller
Software Mentions: 4
Published: over 3 years ago

10.3390/cancers13051151

Transitioning the Molecular Tumor Board from Proof of Concept to Clinical Routine: A German Single-Center Analysis
Cited by: 16
Author(s): Rouven Hoefflin, Adriana Lazarou, Maria Hess, Meike Reiser, Julius Wehrle, Patrick Bastos Metzger, Axel W. Frey, Heiko Becker, Konrad Aumann, Kai Berner, Martin Boeker, Nico Buettner, Christine Dierks, Jesús Duque‐Afonso, Michel Eisenblaetter, Thalia Erbes, Ralph Fritsch, Isabell Ge, Anna-Lena Geißler, Markus Grabbert, Steffen Heeg, Dieter Henrik Heiland, Simone Hettmer, Gian Kayser, Alexander Keller, Anita Kleiber, Alexandra Kutilina, Leman Mehmed, Frank Meiß, Philipp Poxleitner, Justyna Rawluk, Juri Ruf, Henning Schäfer, Florian Scherer, Khalid Shoumariyeh, Andreas Tzschach, Christoph Peters, Tilman Brummer, Martin Werner, Justus Duyster, Silke Laßmann, Cornelius Miething, Melanie Boerries, Anna Lena Illert, Nikolas von Bubnoff
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-018-25544-z

Genomic features of renal cell carcinoma with venous tumor thrombus
Cited by: 17
Author(s): Gregor Warsow, Daniel Hübschmann, Kortine Kleinheinz, Cathleen Nientiedt, Martina Heller, Laura Van Coile, Yanis Tolstov, Lukas Trennheuser, Kathrin Wieczorek, Carine Pecqueux, Claudia Gasch, Timur H. Kuru, Joanne Nyarangi‐Dix, Gencay Hatiboglu, Doğu Teber, Sven Perner, Albrecht Stenzinger, Wilfried Roth, Boris Hadaschik, Sascha Pahernik, Dirk Jäger, Carsten Grüllich, Anette Duensing, Roland Eils, Matthias Schlesner, Holger Sültmann, Markus Hohenfellner, Stefan Duensing
Software Mentions: 2
Published: over 6 years ago