Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: SamSPECTRAL

https://packages.ecosyste.ms/registries/bioconductor.org/packages/SamSPECTRAL

Identifies cell population in flow cytometry data
1 version
Latest release: about 1 year ago
2 dependent packages
29,808 downloads total

Papers Mentioning SamSPECTRAL 11

10.1186/s12859-019-3152-3

flowEMMi: an automated model-based clustering tool for microbial cytometric data
Cited by: 16
Author(s): Joachim Ludwig, Christian Höner zu Siederdissen, Zishu Liu, Peter F. Stadler, Susann Müller
Software Mentions: 18
Published: almost 5 years ago

10.3389/fonc.2016.00188

Immunophenotype Discovery, Hierarchical Organization, and Template-Based Classification of Flow Cytometry Samples
Cited by: 12
Author(s): Ariful Azad, Bartek Rajwa, Alex Pothen
Software Mentions: 10
Published: about 8 years ago

10.1371/journal.pone.0203247

Determination of essential phenotypic elements of clusters in high-dimensional entities—DEPECHE
Cited by: 9
Author(s): Axel Theorell, Yenan T. Bryceson, Jakob Theorell
Software Mentions: 9
Published: over 5 years ago

10.1371/journal.pcbi.1003365

Flow Cytometry Bioinformatics
Cited by: 85
Author(s): Kieran O’Neill, Nima Aghaeepour, Josef Špidlen, Ryan R. Brinkman
Software Mentions: 7
Published: almost 11 years ago

10.1186/1751-0473-8-14

GenePattern flow cytometry suite
Cited by: 16
Author(s): Josef Špidlen, Aaron Barsky, Karin Breuer, Peter A. Carr, Marc‐Danie Nazaire, Barbara Hill, Qian Yu, Ted Liefeld, Michael Reich, Jill P. Mesirov, Peter Wilkinson, Richard H. Scheuermann, Rafick‐Pierre Sékaly, Ryan R. Brinkman
Software Mentions: 5
Published: over 11 years ago

10.1186/1471-2105-11-403

Data reduction for spectral clustering to analyze high throughput flow cytometry data
Cited by: 142
Author(s): Habil Zare, Parisa Shooshtari, Arvind Gupta, Ryan R. Brinkman
Software Mentions: 5
Published: over 14 years ago

10.1186/1471-2164-14-S1-S14

Scoring relevancy of features based on combinatorial analysis of Lasso with application to lymphoma diagnosis
Cited by: 25
Author(s): Habil Zare, Gholamreza Haffari, Arvind Gupta, Ryan R. Brinkman
Software Mentions: 4
Published: almost 12 years ago

10.1186/1756-0500-4-50

Flow cytometry data standards
Cited by: 12
Author(s): Josef Špidlen, Parisa Shooshtari, Tobias R. Kollmann, Ryan R. Brinkman
Software Mentions: 3
Published: over 13 years ago

10.1371/journal.pone.0137635

Multidimensional Clusters of CD4+ T Cell Dysfunction Are Primarily Associated with the CD4/CD8 Ratio in Chronic HIV Infection
Cited by: 9
Author(s): Juliet Frederiksen, Marcus Buggert, Kajsa Noyan, Piotr Nowak, Anders Sönnerborg, Ole Lund, Annika C. Karlsson
Software Mentions: 2
Published: about 9 years ago

10.1186/s12859-015-0862-z

BayesFlow: latent modeling of flow cytometry cell populations
Cited by: 22
Author(s): Kerstin Johnsson, Jonas Wallin, Magnus Fontes
Software Mentions: 2
Published: almost 9 years ago

10.1117/1.JBO.23.7.075004

Evaluating integrin activation with time-resolved flow cytometry
Cited by: 5
Author(s): Jesus Sambrano, Alexandre Chigaev, Kapil Nichani, Yelena Smagley, Larry A. Sklar, Jessica P. Houston
Software Mentions: 1
Published: over 6 years ago