Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: SPONGE

https://packages.ecosyste.ms/registries/bioconductor.org/packages/SPONGE

Sparse Partial Correlations On Gene Expression
1 version
Latest release: 12 months ago
2 dependent packages
7,559 downloads total

Papers Mentioning SPONGE 11

10.1186/s12859-020-3520-z

miRTissue ce: extending miRTissue web service with the analysis of ceRNA-ceRNA interactions
Cited by: 13
Author(s): Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
Software Mentions: 4
Published: about 4 years ago

10.7717/peerj.11121

Network based multifactorial modelling of miRNA-target interactions
Cited by: 1
Author(s): Selcen Arı Yuka, Alper Yılmaz
Software Mentions: 3
Published: over 3 years ago

10.1186/s13063-017-1961-0

The ethics of ‘Trials within Cohorts’ (TwiCs): 2nd international symposium
Cited by: 6
Author(s): Clare Relton, M Burbach, Clive Collett, James Flory, S. Gerlich, Søren Holm, Amanda Hunn, Scott Y. H. Kim, Linda Kwakkenbos, Anne M. May, Jon Nicholl, Danny A. Young‐Afat, Shaun Treweek, Rudolf Uher, Tjeerd van Staa, Joanne Van der Velden, Helena M. Verkooijen, Andrew Vickers, Sophie Welch, Merrick Zwarenstein, Zachary I. Goodman, Anne M. May, Danny A. Young‐Afat, J.P.M. Burbach, Carla H. van Gils, Rieke van der Graaf, Helena M. Verkooijen, Laura C. Coates, William Tillett, David Torgerson, Neil McHugh, Peter Taylor, Lesley Brown, Anne Heaven, John Young, Andrew Clegg, Kate Chatfield, Roxanne Gal, Evelyn M. Monninkhof, Danny A. Young Afat, Rolf H H Groenwold, Marie‐Eve Carrier, Brett D. Thombs, Joanne M. van der Velden, A.S. Gerlich, Jorrit‐Jan Verlaan, Alice M. Couwenberg, J.P.M. Burbach, Emily Peckham, Suzanne Crossland, Tom Hughes, Alisha O’Connor, Imogen Sargent, Simon Gilbody
Software Mentions: 2
Published: over 7 years ago

10.3390/polym13101634

Calorimetric and Dielectric Investigations of Epoxy-Based Nanocomposites with Halloysite Nanotubes as Nanofillers
Cited by: 10
Author(s): Hassan Aboubakr Omar, Glen J. Smales, Sven Henning, Zhi Li, De‐Yi Wang, Andreas Schönhals, Paulina Szymoniak
Software Mentions: 1
Published: over 3 years ago

10.1007/s00464-013-3244-5

Management of upper intestinal leaks using an endoscopic vacuum-assisted closure system (E-VAC)
Cited by: 116
Author(s): Marc Bludau, A. H. Hölscher, Till Herbold, Jessica M. Leers, Christian A. Gutschow, Hans Fuchs, Wolfgang Schröder
Software Mentions: 1
Published: almost 11 years ago

10.1186/s13063-016-1256-x

The impact of retractor SPONGE-assisted laparoscopic surgery on duration of hospital stay and postoperative complications in patients with colorectal cancer (SPONGE trial): study protocol for a randomized controlled trial
Cited by: 9
Author(s): Alice M. Couwenberg, M Burbach, Anke B. Smits, Marco van Vulpen, W.M.U. Van Grevenstein, Peter G. Noordzij, Helena M. Verkooijen
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.7745

Suppression of miR-204 enables oral squamous cell carcinomas to promote cancer stemness, EMT traits, and lymph node metastasis
Cited by: 68
Author(s): Cheng‐Chia Yu, Pei‐Ni Chen, Cheng-Ming Peng, Chuan‐Hang Yu, Ming‐Yung Chou
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.13755

Andrographolide impedes cancer stemness and enhances radio-sensitivity in oral carcinomas via miR-218 activation
Cited by: 47
Author(s): Po-Yu Yang, Pei‐Ling Hsieh, Tong Hong Wang, Cheng‐Chia Yu, Michael S.-C. Lu, Yi-Wen Liao, Tzu-Hsin Lee, Cheng-Ming Peng
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0062623

CLUSTOM: A Novel Method for Clustering 16S rRNA Next Generation Sequences by Overlap Minimization
Cited by: 14
Author(s): Ki-Hwan Hwang, Jeongsu Oh, Tae Kyung Kim, Byung Kwon Kim, Yu Dong, Bo Kyeng Hou, Gustavo Caetano‐Anollés, Soon Gyu Hong, Kyung Mo Kim
Software Mentions: 1
Published: over 11 years ago

10.3390/cancers11050720

Tumor Mesenchymal Stromal Cells Regulate Cell Migration of Atypical Teratoid Rhabdoid Tumor through Exosome-Mediated miR155/SMARCA4 Pathway
Cited by: 20
Author(s): Yi Yang, Phan Nguyen Nhi Nguyen, I. Hsin, Wen Jin Ho, Yi Wei Chen, Yueh Chien, Aliaksandr A. Yarmishyn, Pin I. Huang, Wen-Liang Lo, Chien Ying Wang, Yung Yang Liu, Yi Yen Lee, Chien Min Lin, Ming Teh Chen, Mong‐Lien Wang
Software Mentions: 1
Published: over 5 years ago