Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: SPEM

https://packages.ecosyste.ms/registries/bioconductor.org/packages/SPEM

S-system parameter estimation method
1 version
Latest release: 10 months ago
1 dependent package
18,357 downloads total

Papers Mentioning SPEM 13

Designing and benchmarking the MULTICOM protein structure prediction system
Cited by: 25
Author(s): Jilong Li, Xin Deng, Jesse Eickholt, Jianlin Cheng
Software Mentions: 7
Published: over 11 years ago

10.1007/s13205-014-0216-y

Computational pipeline to identify and characterize functional mutations in ornithine transcarbamylase deficiency
Cited by: 6
Author(s): R. Magesh, C. George Priya Doss
Software Mentions: 2
Published: over 10 years ago

10.4172/jpb.S9-001

Predicting Protein Model Quality from Sequence Alignments by Support Vector Machines
Cited by: 6
Author(s): Xin Deng, Jilong Li, Jianlin Cheng
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pcbi.0030123

Recent Evolutions of Multiple Sequence Alignment Algorithms
Cited by: 200
Author(s): Cédric Notredame
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0027872

Improving the Alignment Quality of Consistency Based Aligners with an Evaluation Function Using Synonymous Protein Words
Cited by: 4
Author(s): Hsin-Nan Lin, Cédric Notredame, Jia‐Ming Chang, Ting‐Yi Sung, Wen-Lian Hsu
Software Mentions: 1
Published: over 12 years ago

10.3389/fnsys.2013.00003

A vermal Purkinje cell simple spike population response encodes the changes in eye movement kinematics due to smooth pursuit adaptation
Cited by: 17
Author(s): Suryadeep Dash, Peter W. Dicke, Peter Thier
Software Mentions: 1
Published: over 11 years ago

10.3389/fnsys.2013.00067

Smooth pursuit adaptation (SPA) exhibits features useful to compensate changes in the properties of the smooth pursuit eye movement system due to usage
Cited by: 8
Author(s): Suryadeep Dash, Peter Thier
Software Mentions: 1
Published: over 11 years ago

10.1186/gb-2007-8-11-r235

Comparative genomic analysis of the odorant-binding protein family in 12 Drosophila genomes: purifying selection and birth-and-death evolution
Cited by: 168
Author(s): Filipe Garrett Vieira, Alejandro Sánchez-Gracia, Julio Rozas
Software Mentions: 1
Published: over 17 years ago

10.1038/srep40613

The same oculomotor vermal Purkinje cells encode the different kinematics of saccades and of smooth pursuit eye movements
Cited by: 16
Author(s): Zong-Peng Sun, Aleksandra Smilgin, Marc Junker, Peter W. Dicke, Peter Thier
Software Mentions: 1
Published: over 7 years ago

10.1107/S2052252516006709

Peculiar orientational disorder in 4-bromo-4′-nitrobiphenyl (BNBP) and 4-bromo-4′-cyanobiphenyl (BCNBP) leading to bipolar crystals
Cited by: 4
Author(s): Matthias Burgener, Hanane Aboulfadl, Gaël Labat, Michel Bonin, Martin Sommer, Ravish Sankolli, Michael Wübbenhorst, Jürg Hulliger
Software Mentions: 1
Published: about 8 years ago

10.3390/ijms22189950

Molecular Landscapes of Gastric Pre-Neoplastic and Pre-Invasive Lesions
Cited by: 10
Author(s): Gianluca Businello, Valentina Angerilli, Paola Parente, Stefano Realdon, Edoardo Savarino, Fabio Farinati, Federica Grillo, Alessandro Vanoli, Francesca Galuppini, Silvia Paccagnella, Gianmaria Pennelli, Luca Mastracci, Luca Saragoni, Matteo Fassan
Software Mentions: 1
Published: almost 3 years ago

10.1016/j.jneumeth.2015.01.003

Active inference and oculomotor pursuit: The dynamic causal modelling of eye movements
Cited by: 34
Author(s): Rick A. Adams, Eduardo A. Aponte, Louise Marshall, Karl J. Friston
Software Mentions: 1
Published: over 9 years ago

10.1186/s12859-018-2524-4

A benchmark study of sequence alignment methods for protein clustering
Cited by: 22
Author(s): Yingying Wang, Hongyan Wu, Yunpeng Cai
Software Mentions: 1
Published: over 5 years ago