Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: SMITE

https://packages.ecosyste.ms/registries/bioconductor.org/packages/SMITE

Significance-based Modules Integrating the Transcriptome and Epigenome
1 version
Latest release: about 1 year ago
10,795 downloads total

Papers Mentioning SMITE 7

Epigenetic regulation of placental gene expression in transcriptional subtypes of preeclampsia
Cited by: 60
Author(s): Katherine Leavey, Samantha L. Wilson, Shannon Bainbridge, Wendy P. Robinson, Brian Cox
Software Mentions: 6
Published: over 6 years ago

10.1016/j.dib.2018.05.107

Integration of genome-wide mRNA and miRNA expression, and DNA methylation data of three cell lines exposed to ten carbon nanomaterials
Cited by: 8
Author(s): Giovanni Scala, Veer Singh Marwah, Pia Anneli Sofia Kinaret, Jukka Sund, Vittorio Fortino, Dario Greco
Software Mentions: 6
Published: over 6 years ago

10.3758/s13428-019-01226-0

SMITE: A toolbox for creating Psychophysics Toolbox and PsychoPy experiments with SMI eye trackers
Cited by: 5
Author(s): Diederick C Niehorster, Maria Nyström
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0206686

Network assessment of demethylation treatment in melanoma: Differential transcriptome-methylome and antigen profile signatures
Cited by: 2
Author(s): Zhijie Jiang, Caterina Cinti, Monia Taranta, Elisabetta Mattioli, Elisa Schena, Sakshi Singh, Rimpi Khurana, Giovanna Lattanzi, Nicholas F. Tsinoremas, Enrico Capobianco
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12859-017-1477-3

SMITE: an R/Bioconductor package that identifies network modules by integrating genomic and epigenomic information
Cited by: 23
Author(s): N. Ari Wijetunga, Andrew D. Johnston, Ryo Maekawa, Fabien Delahaye, Netha Ulahannan, Kami Kim, John M. Greally
Software Mentions: 2
Published: almost 8 years ago

10.3390/ph14090884

Research and Clinical Landscape of Bispecific Antibodies for the Treatment of Solid Malignancies
Cited by: 15
Author(s): Gabriele Antonarelli, Federica Giugliano, Chiara Corti, Matteo Repetto, Paolo Tarantino, Giuseppe Curigliano
Software Mentions: 1
Published: about 3 years ago

10.3758/s13428-020-01414-3

Is apparent fixational drift in eye-tracking data due to filters or eyeball rotation?
Cited by: 10
Author(s): Diederick C Niehorster, Raimondas Zemblys, Kenneth Holmqvist
Software Mentions: 1
Published: over 4 years ago