Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: SLqPCR
https://packages.ecosyste.ms/registries/bioconductor.org/packages/SLqPCR
Functions for analysis of real-time quantitative PCR data at SIRS-Lab GmbH
1 version
Latest release: 12 months ago
30,669 downloads total
Papers Mentioning SLqPCR 16
10.1186/s12864-020-07093-w
Ontogeny of hepatic metabolism in mule ducks highlights different gene expression profiles between carbohydrate and lipid metabolic pathwaysCited by: 4
Author(s): William Massimino, Stéphane Davail, Aurélie Secula, Charlotte Andrieux, Marie-Dominique Bernadet, Tracy Pioche, Karine Ricaud, Karine Gontier, Mireille Morisson, Anne Collin, Stéphane Panserat, Marianne Houssier
Software Mentions: 3
Published: almost 4 years ago
10.1128/mSphere.00020-15
Manipulation of Host Diet To Reduce Gastrointestinal Colonization by the Opportunistic Pathogen Candida albicansCited by: 46
Author(s): Kearney T. W. Gunsalus, Stephanie N. Tornberg-Belanger, Nirupa R Matthan, Alice H. Lichtenstein, Carol A. Kumamoto
Software Mentions: 3
Published: over 8 years ago
10.1371/journal.pone.0075192
Gastric Epithelial Expression of IL-12 Cytokine Family in Helicobacter pylori Infection in Human: Is it Head or Tail of the Coin?Cited by: 14
Author(s): Fadi Al-Sammak, Thomas Kalinski, Sönke Weinert, Alexander Link, Thomas Wex, Peter Malfertheiner
Software Mentions: 2
Published: about 11 years ago
10.1371/journal.pone.0176402
Influence of heat stress, sex and genetic groups on reference genes stability in muscle tissue of chickenCited by: 25
Author(s): Hellenn Cardoso Oliveira, Adriana García, Juliana Gracielle Gonzaga Gromboni, Ronaldo Vasconcelos Farias Filho, Carlos Souza do Nascimento, Amauri Arias Wenceslau
Software Mentions: 2
Published: over 7 years ago
10.1186/1476-4598-13-28
Integrated analysis of microRNA and mRNA expression and association with HIF binding reveals the complexity of microRNA expression regulation under hypoxiaCited by: 129
Author(s): Carme Camps, Harpreet K. Saini, David R. Mole, Hani Choudhry, Martin Reczko, José Afonso Guerra-Assunção, Ya-Min Tian, Francesca M. Buffa, Adrian L. Harris, Artemis G. Hatzigeorgiou, Anton J. Enright, Jiannis Ragoussis
Software Mentions: 2
Published: almost 11 years ago
10.1038/srep32299
Circulating intestine-derived exosomal miR-328 in plasma, a possible biomarker for estimating BCRP function in the human intestinesCited by: 23
Author(s): Keisuke Gotanda, Tomoyoshi Hirota, Jumpei Saito, Masato Fukae, YU En, Noritomo Izumi, Mariko Deguchi, Miyuki Kimura, Shunji Matsuki, Shin Irie, Ichiro Ieiri
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pone.0122515
Reference Gene Validation for RT-qPCR, a Note on Different Available Software PackagesCited by: 183
Author(s): Ward De Spiegelaere, Jutta Dern-Wieloch, Roswitha Weigel, Valérie Schumacher, Hubert Schorle, Daniel Nettersheim, Martin Bergmann, Ralph Brehm, Sabine Kliesch, Linos Vandekerckhove, Cornelia Fink
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0034872
Differential Expression of MicroRNAs in Adipose Tissue after Long-Term High-Fat Diet-Induced Obesity in MiceCited by: 199
Author(s): Dionysios V. Chartoumpekis, Apostolos Zaravinos, Panos G. Ziros, Ralitsa P. Iskrenova, Agathoklis Psyrogiannis, Venetsana Kyriazopoulou, Ioannis Habeos
Software Mentions: 1
Published: over 12 years ago
10.1093/jxb/eru041
Sixteen cytosolic glutamine synthetase genes identified in the Brassica napus L. genome are differentially regulated depending on nitrogen regimes and leaf senescenceCited by: 42
Author(s): Mathilde Orsel, Michaël Moison, Vanessa Clouet, Justine Thomas, Françoise Leprince, Anne-Sophie Canoy, Jérémy Just, Boulos Chalhoub, Céline Masclaux-Daubresse
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0046270
The Transcriptional Targets of Mutant FOXL2 in Granulosa Cell TumoursCited by: 65
Author(s): Roseanne Rosario, Hiromitsu Araki, Cristin G. Print, Andrew N. Shelling
Software Mentions: 1
Published: about 12 years ago
10.1186/s12919-017-0078-5
Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: proceedingsCited by: 1
Author(s): Leon Dent, Sammed N. Mandape, Siddharth Pratap, Jianan Dong, Jamaine Davis, Jennifer A. Gaddy, Kofi Amoah, Steve Damo, Dana Marshall, Jacob D. Jones, Toni Brandt, Gilberto Díaz, Qingguo Wang, Todd Gary, Ashwini Yenamandra, Marina Zoheir Ghattas, Marwa T. ElRakaiby, Ramy K. Aziz, Hamdallah Zedan, Moamen M. Elmassry, Mohamed Lotfy, Jarrad Marcel, Rania Abdelmonem Khattab, Maha M. Abdel‐Fattah, Jack A. Gilbert, Pouya Dini, Shavahn C. Loux, Kirsten E. Scoggin, A. Esteller-Vico, E.L. Squires, Mats H.T. Troedsson, Peter Daels, Barry A. Ball, Kalpani De Silva, Ernest Bailey, Joel C. Stephens, Theodore S. Kalbfleisch, Christine E. Dolin, Lauren G. Poole, Daniel W. Wilkey, Eric C. Rouchka, Gavin E. Arteel, Michelle T. Barati, Michael L. Merchant, Richard M. Higashi, Teresa W.‐M. Fan, Hunter N. B. Moseley, Andrew N. Lane
Software Mentions: 1
Published: about 7 years ago
10.1007/s12035-016-0299-z
Gender-Specific Expression of Ubiquitin-Specific Peptidase 9 Modulates Tau Expression and Phosphorylation: Possible Implications for TauopathiesCited by: 19
Author(s): Sandra Köglsberger, María Lorena Cordero-Maldonado, Paul Antony, Julia Förster, Pierre Garcia, Manuel Buttini, Alexander D. Crawford, Enrico Glaab
Software Mentions: 1
Published: almost 8 years ago
10.7717/peerj.2909
Selection and evaluation of reference genes for analysis of mouse<i>(Mus musculus</i>) sex-dimorphic brain developmentCited by: 22
Author(s): Tanya T. Cheung, Mitchell K. Weston, Megan J. Wilson
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0126405
Conserved Epigenetic Mechanisms Could Play a Key Role in Regulation of Photosynthesis and Development-Related Genes during Needle Development of Pinus radiataCited by: 13
Author(s): Luís Valledor, Jesús Pascual, Mónica Meijón, Monica Escandón, María Jesús Cañal
Software Mentions: 1
Published: over 9 years ago
10.1186/1471-2407-13-533
MicroRNA expression profile in head and neck cancer: HOX-cluster embedded microRNA-196a and microRNA-10b dysregulation implicated in cell proliferationCited by: 69
Author(s): Patrícia Severino, Holger Brüggemann, Flávia Maziero Andreghetto, Carme Camps, María Fátima Guarizo Klingbeil, Welbert Oliveira Pereira, Renata M. Soares, Raquel Ajub Moysés, Victor Wünsch-Filho, Mônica Beatriz Mathor, Fábio Daumas Nunes, Jiannis Ragoussis, Eloíza H. Tajara
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0204348
Identification of endogenous normalizing genes for expression studies in inguinal ring tissue for scrotal hernias in pigsCited by: 9
Author(s): William Raphael Lorenzetti, A. M. G. Ibelli, J. de O. Peixoto, M. A. Z. Morés, Igor Ricardo Savoldi, K. B. do Carmo, Hellenn Cardoso Oliveira, Mônica Corrêa Ledur
Software Mentions: 1
Published: about 6 years ago