Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: Prostar
https://packages.ecosyste.ms/registries/bioconductor.org/packages/Prostar
Provides a GUI for DAPAR
1 version
Latest release: about 1 year ago
16,133 downloads total
Papers Mentioning Prostar 10
10.1111/1751-7915.13301
Desulfitobacteriumcontributes to the microbial transformation of 2,4,5-T by methanogenic enrichment cultures from a Vietnamese active landfillCited by: 12
Author(s): Ute Lechner, Dominique Türkowsky, Thi Thu Hang Dinh, Hassan Al-Fathi, Stefan Schwoch, Stefan Franke, Michelle-Sophie Gerlach, Mandy Koch, Martin von Bergen, Nico Jehmlich, Thi Cam Ha Dang
Software Mentions: 7
Published: about 6 years ago
10.3390/v13030454
Discovery of RSV-Induced BRD4 Protein Interactions Using Native Immunoprecipitation and Parallel Accumulation—Serial Fragmentation (PASEF) Mass SpectrometryCited by: 18
Author(s): Morgan Mann, David S. Roberts, Yanlong Zhu, Yi Li, Jia Zhou, Ying Ge, Allan R. Brasier
Software Mentions: 6
Published: over 3 years ago
10.1093/bioinformatics/btw580
DAPAR & ProStaR: software to perform statistical analyses in quantitative discovery proteomicsCited by: 212
Author(s): Samuel Wieczorek, Florence Combes, Cosmin Lazar, Quentin Giai Gianetto, Laurent Guy, Alexia Dorffer, Anne-Marie Hesse, Yohann Couté, Myriam Ferro, Christophe Bruley, Thomas Bürger
Software Mentions: 4
Published: about 8 years ago
10.3390/ijms22179595
Regulation of the Golgi Apparatus by p38 and JNK Kinases during Cellular Stress ResponsesCited by: 6
Author(s): Cathrine Nordgaard, Maxim A. X. Tollenaere, Ana Martinez Del Val, Dorte B. Bekker-Jensen, Melanie Blasius, Jesper V. Olsen, Simon Bekker‐Jensen
Software Mentions: 3
Published: about 3 years ago
10.1016/j.celrep.2018.06.100
The ESCRT-III Protein CHMP1A Mediates Secretion of Sonic Hedgehog on a Distinctive Subtype of Extracellular VesiclesCited by: 67
Author(s): Michael Coulter, Cristina M. Dorobantu, Gerrald A. Lodewijk, François Delalande, Sarah Cianférani, Vijay Ganesh, Richard Smith, Elaine T. Lim, Chengpei Xu, Song Pang, Eric T. Wong, Hart G.W. Lidov, Monica L. Calicchio, Edward Yang, Dilenny M. Gonzalez, Thorsten M. Schlaeger, Ganeshwaran H. Mochida, Harald F. Hess, Wei-Chung Allen Lee, Maria K. Lehtinen, Tomas Kirchhausen, David Haussler, Frank M. J. Jacobs, Raphaël Gaudin, Christopher A. Walsh
Software Mentions: 3
Published: over 6 years ago
10.1038/s42003-021-02364-y
HLA-B and cysteinylated ligands distinguish the antigen presentation landscape of extracellular vesiclesCited by: 8
Author(s): Julia Bauzá‐Martinez, Albert J. R. Heck, Wei Wu
Software Mentions: 2
Published: over 3 years ago
10.1186/s12866-018-1255-z
Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradationCited by: 15
Author(s): Mónica Andrea Vásquez-Piñeros, Paula Martinez Lavanchy, Nico Jehmlich, Dietmar H. Pieper, Carlos Arturo Peña Rincón, Hauke Harms, Howard Junca, Hermann J. Heipieper
Software Mentions: 2
Published: about 6 years ago
10.3389/fonc.2020.01032
Biliary Tract Carcinogenesis Model Based on Bile MetaproteomicsCited by: 3
Author(s): Ariel A. Arteta, Miryan Margot Sánchez‐Jiménez, Diego F. Dávila, Olga Palacios, Nora Cardona‐Castro
Software Mentions: 2
Published: over 4 years ago
10.1080/19490976.2020.1819155
Gut microbial bile acid metabolite skews macrophage polarization and contributes to high-fat diet-induced colonic inflammationCited by: 56
Author(s): Lingyu Wang, Zizhen Gong, Xiuyuan Zhang, Fangxinxing Zhu, Yuchen Liu, Chaozhi Jin, Xixi Du, Congfeng Xu, Yingwei Chen, Wei Cai, Chunyan Tian, Jin Shang Wu
Software Mentions: 1
Published: about 4 years ago
10.3389/fcvm.2018.00096
TAVI: Simplification Is the Ultimate SophisticationCited by: 13
Author(s): Mariama Akodad, Thierry Lefèvre
Software Mentions: 1
Published: over 6 years ago