An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Projects: bioconductor: PAST

https://packages.ecosyste.ms/registries/bioconductor.org/packages/PAST

Pathway Association Study Tool (PAST)
1 version
Latest release: almost 2 years ago
4,613 downloads total

Enhanced Analysis
Repository Activity:
Repository Owner: IGBB (organization)
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses

Very Likely Science (100)

Papers Mentioning PAST 2,336

10.1371/journal.pone.0149345
Evidence for Host-Genotype Associations of Borrelia burgdorferi Sensu Stricto
Cited by: 44
Author(s): Samir Mechai, Gabriele Margos, Edward J. Feil, Nicole Barairo, L. Robbin Lindsay, Pascal Michel, Nicholas H. Ogden
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0061087
Dynamics of Autotrophic Marine Planktonic Thaumarchaeota in the East China Sea
Cited by: 12
Author(s): Anyi Hu, Zao Yang, Chang-Ping Yu, Nianzhi Jiao
Software Mentions: 1
Published: over 12 years ago
10.1186/1752-153X-6-156
Application of principal component analysis in the pollution assessment with heavy metals of vegetable food chain in the old mining areas
Cited by: 73
Author(s): I. Gergen, Monica Hărmănescu
Software Mentions: 1
Published: over 12 years ago
10.1186/1752-153X-7-99
The occurrence of mycotoxins in wheat from western Romania and histopathological impact as effect of feed intake
Cited by: 30
Author(s): Ersilia Alexa, Cristina Dehelean, Mariana-Atena Poiană, Isidora Radulov, Anca-Maria Cimpean, Despina-Maria Bordean, Camelia Tulcan, Georgeta Pop
Software Mentions: 1
Published: about 12 years ago
10.1038/s41598-019-53552-0
Coral endosymbionts (Symbiodiniaceae) emit species-specific volatilomes that shift when exposed to thermal stress
Cited by: 30
Author(s): Caitlin A. Lawson, Malcolm Possell, Justin R. Seymour, Jean-Baptiste Raina, David J. Suggett
Software Mentions: 1
Published: over 5 years ago
10.1007/s12298-020-00839-6
Genetic diversity and population structure of endangered plant species Anagallis foemina Mill. [Lysimachia foemina (Mill.) U. Manns & Anderb.]
Cited by: 4
Author(s): Ewa Kwiecińska-Poppe, Małgorzata Haliniarz, Sylwia Sowa, Edyta Paczos-Grzęda
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-021-89135-1
New radiometric 40Ar–39Ar dates and faunistic analyses refine evolutionary dynamics of Neogene vertebrate assemblages in southern South America
Cited by: 30
Author(s): Francisco Juan Prevosti, Cristo O. Romano, Analía M. Forasiepi, S. R. Hemming, Ricardo Adolfo Bonini, Adriana Magdalena Candela, Esperanza Cerdeño, Mirta Jaén, Pablo E. Ortíz, François Pujos, Luciano Luis Rasia, Gabriela I. Schmidt, Matias Luciano Taglioretti, R. D. E. MacPhee, Ulyses F. J. Pardiñas
Software Mentions: 1
Published: about 4 years ago
10.1186/s12998-020-00357-y
Effects of spinal manipulative therapy on inflammatory mediators in patients with non-specific low back pain: a non-randomized controlled clinical trial
Cited by: 10
Author(s): Julita A. Teodorczyk-Injeyan, John J. Triano, Robert Gringmuth, Christopher DeGraauw, Adrian Chow, H. Stephen Injeyan
Software Mentions: 1
Published: over 4 years ago
10.1002/cre2.169
Evaluation of the accuracy of Demirjian's method for estimating chronological age from dental age in Shiraz, Iran: Using geometric morphometrics method
Cited by: 7
Author(s): Masood Kermani, Farideh Tabatabaei Yazdi, Matin Abed Haghighi
Software Mentions: 1
Published: over 6 years ago
10.1007/s00784-016-1876-2
Effect of mouthwashes on the composition and metabolic activity of oral biofilms grown in vitro
Cited by: 23
Author(s): Mercedes Fernandez y Mostajo, R.A.M. Exterkate, Mark J. Buijs, Wim Crielaard, Egija Zaura
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0201257
Trophic ecology of sympatric small cats in the Brazilian Pampa
Cited by: 11
Author(s): Raissa Prior Migliorini, Felipe Bortolotto Peters, Marina Ochoa Favarini, Carlos Benhur Kasper
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0109360
Sub-Decadal Resolution in Sediments of Late Miocene Lake Pannon Reveals Speciation of Cyprideis (Crustacea, Ostracoda)
Cited by: 6
Author(s): Frank Gitter, Martin Groß, Werner E. Piller
Software Mentions: 1
Published: over 10 years ago
10.1038/s42003-021-01850-7
Sacrum morphology supports taxonomic heterogeneity of “Australopithecus africanus” at Sterkfontein Member 4
Cited by: 5
Author(s): Cinzia Fornai, Viktoria A. Krenn, Philipp Mitterœcker, Nicole M. Webb, Martin Haeusler
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-019-54914-4
Impact of Organic Loading Rate in Volatile Fatty Acids Production and Population Dynamics Using Microalgae Biomass as Substrate
Cited by: 65
Author(s): José Antonio Magdalena, Silvia Greses, Cristina González‐Fernández
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-021-88710-w
On valorization of solvent extracts of Terminalia arjuna (arjuna) upon DNA scission and free radical scavenging improves coupling responses and cognitive functions under in vitro conditions
Cited by: 7
Author(s): Dharmendra Kumar Meena, Amiya Kumar Sahoo, Prem Prakash Srivastava, N.P. Sahu, M. B. Jadhav, Mayuri N. Gandhi, Himanshu Sekhar Swain, Simanku Borah, Basanta Kumar Das
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0143724
Effect of Climate Change on Invasion Risk of Giant African Snail (Achatina fulica Férussac, 1821: Achatinidae) in India
Cited by: 40
Author(s): Roshmi Rekha Sarma, Madhushree Munsi, Aravind Neelavara Ananthram
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0168236
Ecologically Different Fungi Affect Arabidopsis Development: Contribution of Soluble and Volatile Compounds
Cited by: 24
Author(s): Salvatore Casarrubia, Sara Sapienza, Héma Fritz, Stefania Daghino, Maaria Rosenkranz, Jörg Peter Schnitzler, Francis Martin, Silvia Perotto, Elena Martino
Software Mentions: 1
Published: over 8 years ago
10.1038/s42003-020-01561-5
Environmental drivers of body size evolution in crocodile-line archosaurs
Cited by: 26
Author(s): Maximilian T Stockdale, Michael J. Benton
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-021-95330-x
The largest and earliest known sample of dental caries in an extinct mammal (Mammalia, Euarchonta, Microsyops latidens) and its ecological implications
Cited by: 4
Author(s): Keegan R. Selig, Mary Silcox
Software Mentions: 1
Published: almost 4 years ago
10.3897/compcytogen.v5i2.968
Polyploid races, genetic structure and morphological features of earthworm Aporrectodea rosea (Savigny, 1826) (Oligohaeta, Lumbricidae) in Ukraine
Cited by: 4
Author(s): Р. П. Власенко, С. В. Межжерин, А. В. Гарбар, Yu. Kotsuba
Software Mentions: 1
Published: about 14 years ago
10.3897/CompCytogen.v9i3.4519
Karyotype characteristics and polymorphism peculiarities of Chironomus bernensis Wülker & Klötzli, 1973 (Diptera, Chironomidae) from the Central Caucasus and Ciscaucasia
Cited by: 0
Author(s): Mukhamed Kh. Karmokov, Н. В. Полуконова, Olga V. Sinishkina
Software Mentions: 1
Published: about 10 years ago
10.3897/CompCytogen.v12i3.25832
Karyotype characteristics and chromosomal polymorphism of Chironomus “annularius” sensu Strenzke (1959) (Diptera, Chironomidae) from the Caucasus region
Cited by: 1
Author(s): Mukhamed Kh. Karmokov
Software Mentions: 1
Published: almost 7 years ago
10.1093/conphys/coaa135
Steroid hormones in Pacific walrus bones collected over three millennia indicate physiological responses to changes in estimated population size and the environment
Cited by: 4
Author(s): Patrick Charapata, Lara Horstmann, Nicole Misarti
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0234287
Coleoborers (Curculionidae: Scolytinae) in native and homogeneous systems of Brazil nut (Bertholletia excelsa bonpl.) in the Southern Amazon, Brazil
Cited by: 1
Author(s): Marcus Henrique Martins e Silva, Júliana Garlet, Fernando L. Silva, Carla da Silva Paula
Software Mentions: 1
Published: over 4 years ago
10.3390/plants10071292
Aquatic Macrophytes Occurrence in Mediterranean Farm Ponds: Preliminary Investigations in North-Western Sicily (Italy)
Cited by: 6
Author(s): Patrizia Panzeca, Angelo Troìa, Paolo Madonia
Software Mentions: 1
Published: about 4 years ago
10.1007/s00294-021-01181-4
A modified culture medium and hyphae isolation method can increase quality of the RNA extracted from mycelia of a dimorphic fungal species
Cited by: 5
Author(s): László Papp, Lajos Ács-Szabó, Szilárd Póliska, Ida Miklós
Software Mentions: 1
Published: over 4 years ago
10.1007/s00284-020-02241-7
Planktonic and Benthic Bacterial Communities of the Largest Central European Shallow Lake, Lake Balaton and Its Main Inflow Zala River
Cited by: 5
Author(s): Milán Farkas, Edit Kaszab, Julia Rádó, Judit Háhn, Gergő Tóth, Péter Harkai, Árpád Ferincz, Zsófia Lovász, Andräs Táncsics, Lajos Vörös, Balázs Kriszt, Sándor Szoboszlay
Software Mentions: 1
Published: almost 5 years ago
10.3390/plants10071350
Morphological Characteristics of Grapevine Cultivars and Closed Contour Analysis with Elliptic Fourier Descriptors
Cited by: 3
Author(s): Muhammed Küpe, Bahadır Sayinci, Bünyamin Demír, Sezai Erċışlı, Mojmí­r Baroň, Jiří­ Sochor
Software Mentions: 1
Published: about 4 years ago
10.1016/j.dib.2019.105014
Dataset showing the abundance and distribution of benthic foraminifera in relation to marine sediment parameters from western Arabian Gulf
Cited by: 1
Author(s): Abduljamiu O. Amao, Mohammad A. Qurban, Michael A. Kaminski, Thadickal V. Joydas, Karuppasamy P. Manikandan, Fabrizio Frontalini
Software Mentions: 1
Published: over 5 years ago
10.1016/j.dib.2021.107154
A dataset of calcareous nannoplankton and smaller benthic foraminifera from a middle Eocene nummulitic accumulation (Transylvanian Basin, Romania)
Cited by: 1
Author(s): Raluca Bindiu-Haitonic, Ramona Bălc, Szabolcs-Attila Kövecsi, George Pleş, Lóránd Silye
Software Mentions: 1
Published: about 4 years ago
10.1016/j.dib.2020.105392
The temperature dependence of amino acid hydrophobicity data is related to the genetic coding algorithm for complementary (sense and antisense) peptide interactions
Cited by: 1
Author(s): Nikola Štambuk, Paško Konjevoda
Software Mentions: 1
Published: about 5 years ago
10.1016/j.dib.2018.08.102
ISSR diversity in Jatropha curcas germplasm and offspring of selected parentals
Cited by: 1
Author(s): Juan Ubaldo Sánchez-Velázquez, Ana Ramos-Díaz
Software Mentions: 1
Published: almost 7 years ago
10.1016/j.dib.2019.104568
Fungal metabolic profile dataset was not influenced by long-term in vitro preservation of strains
Cited by: 2
Author(s): Tereza Veselská, Miroslav Kolařík
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-021-91020-w
Fraud in highly appreciated fish detected from DNA in Europe may undermine the Development Goal of sustainable fishing in Africa
Cited by: 16
Author(s): Carmen Blanco-Fernandez, Alba Ardura, Paula Masiá, Noemí Rodríguez, Laura Voces, Marcelino Fernandez-Raigoso, A. Roca, Gonzalo Machado‐Schiaffino, Eduardo Dopico, Eva García‐Vázquez
Software Mentions: 1
Published: about 4 years ago
10.3390/plants9020153
Application of Deep Eutectic Solvents for the Extraction of Rutin and Rosmarinic Acid from Satureja montana L. and Evaluation of the Extracts Antiradical Activity
Cited by: 20
Author(s): Martina Jakovljević, Jelena Vladić, Senka Vidović, Kristian Pastor, Stela Jokić, Maja Molnar, Igor Jerković
Software Mentions: 1
Published: over 5 years ago