Projects: bioconductor: PAST

https://packages.ecosyste.ms/registries/bioconductor.org/packages/PAST

Pathway Association Study Tool (PAST)
1 version
Latest release: almost 3 years ago
4,613 downloads total

Enhanced Analysis
Repository Activity:
Repository Owner: IGBB (organization)
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses

Very Likely Science (100)

Papers Mentioning PAST 2,336

10.1002/ece3.7545
Speciation along a latitudinal gradient: The origin of the Neotropical cycad sister pair <i>Dioon sonorense</i>–<i>D. vovidesii</i> (Zamiaceae)
Cited by: 2
Author(s): José Said Gutiérrez‐Ortega, Francisco Molina‐Freaner, José Ignacio Manteca Martínez, Miguel Ángel Pérez‐Farrera, Andrew P. Vovides, Antonio Hernández‐López, Ayumi Tezuka, Atsushi J. Nagano, Yasuyuki Watano, Yuma Takahashi, Masashi Murakami, Tadashi Kajita
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.4185
Claw morphometrics in monitor lizards: Variable substrate and habitat use correlate to shape diversity within a predator guild
Cited by: 31
Author(s): Domenic C. D’Amore, Simon Clulow, J. Sean Doody, David Rhind, Colin R. McHenry
Software Mentions: 1
Published: over 8 years ago
10.1002/ece3.7738
Spatial pattern of genetic diversity in field populations of <i>Fusarium incarnatum‐equiseti</i> species complex
Cited by: 1
Author(s): Sephra N. Rampersad
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.7340
Food resource partitioning between juvenile and mature weatherfish <i>Misgurnus fossilis</i>
Cited by: 3
Author(s): Kacper Pyrzanowski, Grzegorz Zięba, Joanna Leszczyńska, Małgorzata Adamczuk, Małgorzata Dukowska, Mirosław Przybylski
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.1598
The avoidance strategy of environmental constraints by an aquatic plant <i>Potamogeton alpinus</i> in running waters
Cited by: 14
Author(s): Alicja Robionek, Krzysztof Banaś, Rafał Chmara, Józef Szmeja
Software Mentions: 1
Published: about 11 years ago
10.1002/ece3.1298
The phenotypic variance gradient - a novel concept
Cited by: 4
Author(s): Cino Pertoldi, Jørgen Bundgaard, Volker Loeschcke, J. S. F. Barker
Software Mentions: 1
Published: about 12 years ago
10.1002/ece3.7108
Toward the conservation of the endemic monotypic fish genus<i>Aulopyge</i>from the Balkan Dinaric karst: Integrative assessment of introduced and natural population
Cited by: 2
Author(s): Jasmina Ludoški, Ljubinka Francuski, Milica Lukač, Radoslav Dekić, Vesna Milankov
Software Mentions: 1
Published: almost 6 years ago
10.1002/ece3.6809
Identifying Priority Giant Anteater (<i>Myrmecophaga tridactyla</i>) Populations for Conservation in São Paulo State, Brazil
Cited by: 4
Author(s): Ricardo Quitério Sartori, Alessandro Garcia Lopes, Luiz Paulo Nogueira Aires, Rita de Cássia Bianchi, Cinara Cássia Brandão de Mattos, Adriana Morales, Lílian Castiglioni
Software Mentions: 1
Published: almost 6 years ago
10.1002/ece3.701
Less can be more: loss of MHC functional diversity can reflect adaptation to novel conditions during fish invasions
Cited by: 12
Author(s): Catalina Monzón‐Argüello, Carlos García de Leániz, Gonzalo Gajardo, Sofía Consuegra
Software Mentions: 1
Published: about 13 years ago
10.1002/ece3.2882
Global pattern of plant utilization across different organisms: Does plant apparency or plant phylogeny matter?
Cited by: 14
Author(s): Xiaohua Dai, Wei Zhang, Jiasheng Xu, Kevin J. Duffy, Qianjin Guo
Software Mentions: 1
Published: over 9 years ago
10.15252/emmm.201404402
Combined deletion of <scp>P</scp>ten and p53 in mammary epithelium accelerates triple‐negative breast cancer with dependency on e<scp>EF</scp>2<scp>K</scp>
Cited by: 92
Author(s): Jeff C. Liu, Véronique Voisin, Sharon Wang, Dong‐Yu Wang, Robert A. Jones, Alessandro Datti, David Uehling, Rima Al‐awar, Sean E. Egan, Gary D. Bader, Ming‐Sound Tsao, Tak W. Mak, Eldad Zacksenhaus
Software Mentions: 1
Published: almost 12 years ago
10.1002/ece3.6495
Do Chinese cavefish show intraspecific variability in morphological traits?
Cited by: 6
Author(s): Enrico Lunghi, Yahui Zhao
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0103144
Urbanization Breaks Up Host-Parasite Interactions: A Case Study on Parasite Community Ecology of Rufous-Bellied Thrushes (Turdus rufiventris) along a Rural-Urban Gradient
Cited by: 55
Author(s): Cláudia Calegaro‐Marques, Suzana B. Amato
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0119393
Persistence of Pristine Deep-Sea Coral Gardens in the Mediterranean Sea (SW Sardinia)
Cited by: 105
Author(s): Marzia Bo, Giorgio Bavestrello, Michela Angiolillo, Lucio Calcagnile, Simonepietro Canese, Rita Cannas, Alessandro Cau, Marisa D’Elia, Filippo D’Oriano, María Cristina Follesa, Gianluca Quarta, Angelo Cau
Software Mentions: 1
Published: over 11 years ago
10.1590/2177-6709.23.6.016-029.oin
Premaxilla: up to which age it remains separated from the maxilla by a suture, how often it occurs in children and adults, and possible clinical and therapeutic implications: Study of 1,138 human skulls
Cited by: 5
Author(s): Mariana Trevizan, Paulo Nelson Filho, Solange de Oliveira Braga Franzolin, Alberto Consolaro
Software Mentions: 1
Published: almost 8 years ago
10.1002/ece3.5371
Species composition and community structure of small pest rodents (Muridae) in cultivated and fallow fields in maize‐growing areas in Mayuge district, Eastern Uganda
Cited by: 14
Author(s): Alex Mayamba, Robert M. Byamungu, Rhodes H. Makundi, Didas N. Kimaro, Moses Isabirye, Apia W. Massawe, David Kifumba, Alice Nakiyemba, Herwig Leirs, Mashaka Mdangi, Brian E. Isabirye, Loth S. Mulungu
Software Mentions: 1
Published: over 7 years ago
10.1016/j.dib.2019.104568
Fungal metabolic profile dataset was not influenced by long-term in vitro preservation of strains
Cited by: 2
Author(s): Tereza Veselská, Miroslav Kolařík
Software Mentions: 1
Published: almost 7 years ago
10.1002/ece3.1043
Using soil seed banks to assess temporal patterns of genetic variation in invasive plant populations
Cited by: 18
Author(s): Mark Fennell, Tommy Gallagher, Luis León Vintró, Bruce Osborne
Software Mentions: 1
Published: over 12 years ago
10.3390/ijms21134805
Single Nucleotide Polymorphisms as Practical Molecular Tools to Support European Chestnut Agrobiodiversity Management
Cited by: 10
Author(s): Angelina Nunziata, Valentino Ruggieri, Milena Petriccione, Luigi De Masi
Software Mentions: 1
Published: over 6 years ago
10.1016/j.dib.2018.08.102
ISSR diversity in Jatropha curcas germplasm and offspring of selected parentals
Cited by: 1
Author(s): Juan Ubaldo Sánchez-Velázquez, Ana Ramos-Díaz
Software Mentions: 1
Published: about 8 years ago
10.1002/ece3.2297
Two in one: cryptic species discovered in biological control agent populations using molecular data and crossbreeding experiments
Cited by: 47
Author(s): Iain D. Paterson, Rosie Mangan, D. A. Downie, Julie A. Coetzee, Martin Hill, Ashley Burke, Paul Downey, Thomas J. Henry, Stephen G. Compton
Software Mentions: 1
Published: about 10 years ago
10.1016/j.dib.2020.105392
The temperature dependence of amino acid hydrophobicity data is related to the genetic coding algorithm for complementary (sense and antisense) peptide interactions
Cited by: 1
Author(s): Nikola Štambuk, Paško Konjevoda
Software Mentions: 1
Published: over 6 years ago
10.1002/ece3.5521
Genetic and morphological analyses reveal a complex biogeographic pattern in the endemic barbel populations of the southern Italian peninsula
Cited by: 13
Author(s): Serena Zaccara, Silvia Quadroni, Vanessa De Santis, Isabella Vanetti, Antonella Carosi, J. Robert Britton, Massimo Lorenzoni
Software Mentions: 1
Published: about 7 years ago
10.1016/j.dib.2021.107154
A dataset of calcareous nannoplankton and smaller benthic foraminifera from a middle Eocene nummulitic accumulation (Transylvanian Basin, Romania)
Cited by: 1
Author(s): Raluca Bindiu-Haitonic, Ramona Bălc, Szabolcs-Attila Kövecsi, George Pleş, Lóránd Silye
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.6823
Retracted: Niches of nine mangrove species in a <i>Sonneratia apetala</i> ‐colonized area of Dongzhai Harbor, Hainan Island, China
Cited by: 5
Author(s): Feng Wu, Baowen Liao, Yujun Chen, Zhongmao Jiang, Yunpeng Guo, Mei Li
Software Mentions: 1
Published: about 6 years ago
10.1016/j.dib.2019.105014
Dataset showing the abundance and distribution of benthic foraminifera in relation to marine sediment parameters from western Arabian Gulf
Cited by: 1
Author(s): Abduljamiu O. Amao, Mohammad A. Qurban, Michael A. Kaminski, Thadickal V. Joydas, Karuppasamy P. Manikandan, Fabrizio Frontalini
Software Mentions: 1
Published: over 6 years ago
10.1007/s00284-020-02241-7
Planktonic and Benthic Bacterial Communities of the Largest Central European Shallow Lake, Lake Balaton and Its Main Inflow Zala River
Cited by: 5
Author(s): Milán Farkas, Edit Kaszab, Julia Rádó, Judit Háhn, Gergő Tóth, Péter Harkai, Árpád Ferincz, Zsófia Lovász, Andräs Táncsics, Lajos Vörös, Balázs Kriszt, Sándor Szoboszlay
Software Mentions: 1
Published: almost 6 years ago
10.1002/ece3.7092
Population genetic structure and evolution of Batesian mimicry in<i>Papilio polytes</i>from the Ryukyu Islands, Japan, analyzed by genotyping‐by‐sequencing
Cited by: 2
Author(s): Yukuto Sato, Kaori Tsurui‐Sato, Mitsuho Katoh, Ryosuke Kimura, Haruki Tatsuta, Kazuki Tsuji
Software Mentions: 1
Published: almost 6 years ago
10.1002/ece3.5163
Impact of disturbed areas on Theraphosidae spiders diversity (Araneae) and first population data of <i>Grammostola rosea</i> (Walckenaer) in Panul Park
Cited by: 9
Author(s): Milenko A. Aguilera, V Rubén Montenegro, María E. Casanueva
Software Mentions: 1
Published: over 7 years ago
10.1007/s00294-021-01181-4
A modified culture medium and hyphae isolation method can increase quality of the RNA extracted from mycelia of a dimorphic fungal species
Cited by: 5
Author(s): László Papp, Lajos Ács-Szabó, Szilárd Póliska, Ida Miklós
Software Mentions: 1
Published: over 5 years ago
10.1111/jzs.12244
Systematics, genetics, and biogeography of intertidal mites (Acari, Oribatida) from the Andaman Sea and Strait of Malacca
Cited by: 16
Author(s): Tobias Pfingstl, Andrea Lienhard, Satoshi Shimano, Zulfigar Yasin, Aileen Tan Shau-Hwai, Sopark Jantarit, Booppa Petcharad
Software Mentions: 1
Published: about 8 years ago
10.1093/conphys/coaa135
Steroid hormones in Pacific walrus bones collected over three millennia indicate physiological responses to changes in estimated population size and the environment
Cited by: 4
Author(s): Patrick Charapata, Lara Horstmann, Nicole Misarti
Software Mentions: 1
Published: almost 6 years ago
10.1002/ece3.1972
Disentangling vegetation diversity from climate-energy and habitat heterogeneity for explaining animal geographic patterns
Cited by: 26
Author(s): Borja Jímenez‐Alfaro, Milan Chytrý, Ladislav Mucina, James B. Grace, Marcel Rejmánek
Software Mentions: 1
Published: over 10 years ago
10.1002/ece3.3984
Competition matters: Determining the drivers of land snail community assembly among limestone karst areas in northern Vietnam
Cited by: 9
Author(s): Parm Viktor von Oheimb, Katharina C. M. von Oheimb, Toshio Hirano, Tu Van Do, Hào Văn Lương, Jonathan D. Ablett, Sang Van Pham, Fred Naggs
Software Mentions: 1
Published: over 8 years ago
10.3897/CompCytogen.v12i3.25832
Karyotype characteristics and chromosomal polymorphism of Chironomus “annularius” sensu Strenzke (1959) (Diptera, Chironomidae) from the Caucasus region
Cited by: 1
Author(s): Mukhamed Kh. Karmokov
Software Mentions: 1
Published: about 8 years ago