Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: OLIN
https://packages.ecosyste.ms/registries/bioconductor.org/packages/OLIN
Optimized local intensity-dependent normalisation of two-color microarrays
1 version
Latest release: 11 months ago
2 dependent packages
29,093 downloads total
Papers Mentioning OLIN 12
10.3389/fgene.2019.00855
Variance-Preserving Estimation of Intensity Values Obtained From Omics ExperimentsCited by: 0
Author(s): Adele Ribeiro, Júlia Maria Pavan Soler, Roberto Hirata
Software Mentions: 5
Published: almost 5 years ago
10.1186/1471-2164-8-464
Profiling sex-biased gene expression during parthenogenetic reproduction in Daphnia pulexCited by: 50
Author(s): Brian D. Eads, John K. Colbourne, Elizabeth A. Bohuski, Justen Andrews
Software Mentions: 3
Published: over 17 years ago
10.1371/journal.pgen.1001135
Analysis of the Basidiomycete Coprinopsis cinerea Reveals Conservation of the Core Meiotic Expression Program over Half a Billion Years of EvolutionCited by: 34
Author(s): Claire Burns, Jason E. Stajich, Andreas Rechtsteiner, Lorna A. Casselton, Sean E. Hanlon, Sarah K. Wilke, Oleksandr P. Savytskyy, Allen C. Gathman, Walt W. Lilly, Jason D. Lieb, Miriam E. Zolan, Patricia J. Pukkila
Software Mentions: 3
Published: almost 14 years ago
10.1186/gb-2007-8-4-r67
Functional dissection of the ash2 and ash1 transcriptomes provides insights into the transcriptional basis of wing phenotypes and reveals conserved protein interactionsCited by: 35
Author(s): Sergi Beltrán, Martín Angulo, Miguel Pignatelli, Florenci Serras, Montserrat Corominas
Software Mentions: 2
Published: over 17 years ago
10.1186/gb-2009-10-9-r97
Gene networks in Drosophila melanogaster: integrating experimental data to predict gene functionCited by: 49
Author(s): James C. Costello, Mehmet Dalkılıç, Scott Beason, Jeff R. Gehlhausen, Rupali P Patwardhan, Sumit Middha, Brian D. Eads, Justen Andrews
Software Mentions: 2
Published: over 15 years ago
10.1186/1471-2105-10-61
A comparison on effects of normalisations in the detection of differentially expressed genesCited by: 16
Author(s): Monica Chiogna, M. Sofia Massa, Davide Risso, Chiara Romualdi
Software Mentions: 2
Published: over 15 years ago
10.1001/jamanetworkopen.2018.0789
Association of Electronic Cigarette Use With Smoking Habits, Demographic Factors, and Respiratory SymptomsCited by: 79
Author(s): Linnéa Hedman, Helena Bäckman, Caroline Stridsman, Jenny A. Bosson, Magnus Lundbäck, Anne Lindberg, Eva Rönmark, Linda Ekerljung
Software Mentions: 1
Published: about 6 years ago
10.1186/1471-213X-10-94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discsCited by: 54
Author(s): Enrique Blanco, Marina Ruiz-Romero, Sergi Beltrán, Manel Bosch, Adrià Punset, Florenci Serras, Montserrat Corominas
Software Mentions: 1
Published: about 14 years ago
10.3389/fgene.2014.00240
Identification of biomarkers for tuberculosis susceptibility via integrated analysis of gene expression and longitudinal clinical dataCited by: 12
Author(s): Qi Luo, Smriti Mehra, Nadia Golden, Deepak Kaushal, Michelle Lacey
Software Mentions: 1
Published: about 10 years ago
10.1186/gb-2008-9-9-r134
Conserved chromosomal clustering of genes governed by chromatin regulators in DrosophilaCited by: 14
Author(s): Enrique Blanco, Miguel Pignatelli, Sergi Beltrán, Adrià Punset, Sílvia Pérez-Lluch, Florenci Serras, Roderic Guigó, Montserrat Corominas
Software Mentions: 1
Published: over 16 years ago
10.1186/s12954-020-00440-w
How effective are electronic cigarettes for reducing respiratory and cardiovascular risk in smokers? A systematic reviewCited by: 30
Author(s): Maciej Ł. Goniewicz, Connor R Miller, Edward Sutanto, Dongmei Li
Software Mentions: 1
Published: almost 4 years ago
10.1186/1471-2105-8-207
Orthogonal projections to latent structures as a strategy for microarray data normalizationCited by: 74
Author(s): Max Bylesjö, Daniel Eriksson, Andreas Sjödin, Stefan Jansson, Thomas Moritz, Johan Trygg
Software Mentions: 1
Published: about 17 years ago