bioconductor: HIBAG | Projects | Ecosyste.ms: Papers

10.1126/sciadv.1501678

Novel multiple sclerosis susceptibility loci implicated in epigenetic regulation
Cited by: 111
Author(s): Till F. M. Andlauer, Dorothea Buck, Gisela Antony, Antonios Bayas, Lukas Bechmann, Achim Berthele, Andrew T. Chan, Christiane Gasperi, Ralf Gold, Christiane Graetz, Jürgen Haas, Michael Hecker, Carmen Infante-Duarte, M. Knop, Tania Kümpfel, Volker Limmroth, Ralf A. Linker, Verena Loleit, Felix Luessi, Sven G. Meuth, Mark Mühlau, Sandra Nischwitz, Friedemann Paul, Michael Pütz, Tobias Ruck, Anke Salmen, Martin Stangel, Jan‐Patrick Stellmann, Klarissa Hanja Stürner, Björn Tackenberg, Florian Then Bergh, Hayrettin Tumani, Clemens Warnke, Frank Weber, Heinz Wiendl, Brigitte Wildemann, Uwe K. Zettl, Ulf Ziemann, Frauke Zipp, Janine Arloth, Peter Weber, Milena Radivojkov‐Blagojevic, Markus O. Scheinhardt, Theresa Dankowski, Peter Lichtner, Darina Czamara, Tania Carrillo-Roa, Elisabeth B. Binder, Klaus Berger, Lars Bertram, André Franke, Christian Gieger, Stefan Herms, Georg Homuth, Marcus Ising, Karl‐Heinz Jöckel, Tim Kacprowski, Stefan Kloiber, Matthias Laudes, Wolfgang Lieb, Christina M. Lill, Thomas Meitinger, Susanne Moebus, Martina Müller‐Nurasyid, Markus M. Nöthen, Astrid Petersmann, Rajesh Rawal, Ulf Schminke, Konstantin Strauch, Henry Völzke, Mélanie Waldenberger, Jürgen Wellmann, Eleonora Porcu, Antonella Mulas, Maristella Pitzalis, Carlo Sidore, Ilenia Zara, Francesco Cucca, Magdalena Żołędziewska, Andreas Ziegler, Bernhard Hemmer, Bertram Müller‐Myhsok
Software Mentions: 3
Published: over 8 years ago

10.1186/s12859-017-1746-1

HLA-check: evaluating HLA data from SNP information
Cited by: 7
Author(s): M Jeanmougin, Josselin Noirel, Cédric Coulonges, Jean‐François Zagury
Software Mentions: 2
Published: over 7 years ago

10.1186/s12864-021-07508-2

Comparing low-pass sequencing and genotyping for trait mapping in pharmacogenetics
Cited by: 27
Author(s): Kaja A. Wasik, Tomaz Berisa, Joseph K. Pickrell, Jeremiah H. Li, Dana J. Fraser, Karen S. King, Charles Cox
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pgen.1009199

Function of multiple sclerosis-protective HLA class I alleles revealed by genome-wide protein-quantitative trait loci mapping of interferon signalling
Cited by: 10
Author(s): Christian Lundtoft, Pascal Pucholt, Juliana Imgenberg‐Kreuz, Jonas Carlsson Carlsson Almlöf, Maija‐Leena Eloranta, Ann‐Christine Syvänen, Gunnel Nordmark, Johanna K. Sandling, Ingrid Kockum, Tomas Olsson, Lars Rönnblom, Niklas Hagberg
Software Mentions: 2
Published: about 4 years ago

10.1098/rspb.2020.1682

Post-copulatory genetic matchmaking: HLA-dependent effects of cervical mucus on human sperm function
Cited by: 14
Author(s): Annalaura Jokiniemi, Martina Magris, Jarmo Ritari, Liisa Kuusipalo, Tuulia Lundgren, Jukka Partanen, Jukka Kekäläinen
Software Mentions: 2
Published: over 4 years ago

10.1007/s00467-021-04955-7

HLA-DQ and HLA-DRB1 alleles associated with Henoch-Schönlein purpura nephritis in Finnish pediatric population: a genome-wide association study
Cited by: 8
Author(s): Mikael Koskela, Julia Nihtilä, Elisa Ylinen, Kaija Leena Kolho, Matti Nuutinen, Jarmo Ritari, Timo Jahnukainen
Software Mentions: 1
Published: almost 4 years ago

10.1038/tpj.2013.18

HIBAG—HLA genotype imputation with attribute bagging
Cited by: 303
Author(s): Xiuwen Zheng, Judong Shen, Charles Cox, Julie Wakefield, Margaret G. Ehm, Matthew R. Nelson, Bruce S. Weir
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pgen.1003880

Genome Wide Analysis of Narcolepsy in China Implicates Novel Immune Loci and Reveals Changes in Association Prior to Versus After the 2009 H1N1 Influenza Pandemic
Cited by: 127
Author(s): Fang Han, Juliette Faraco, Xiaojing Dong, Hanna Ollila, Gang Li, Jing Li, Peng An, Shan Wang, K. Jiang, Zhan Gao, Liang Zhao, Han Yan, Ya Nan Liu, Qing Hua Li, Xiao Zhe Zhang, Yan Hu, Jing Yu Wang, Yun Hui Lu, Chang Jun Lu, Wei Zhou, Joachim Hallmayer, Yu Huang, Kingman P. Strohl, Thomas Pollmächer, Emmanuel Mignot
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pgen.1007833

Amino acid residues in five separate HLA genes can explain most of the known associations between the MHC and primary biliary cholangitis
Cited by: 10
Author(s): Rebecca Darlay, Kristin L. Ayers, George Mells, Lynsey S. Hall, Yushi Liu, Mohamed A. Almarri, Graeme Alexander, David Jones, Richard Sandford, Carl A. Anderson, Heather J. Cordell
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0172826

Interactions within the MHC contribute to the genetic architecture of celiac disease
Cited by: 15
Author(s): Benjamin Goudey, Gad Abraham, Eder Kikianty, Qiao Wang, Dave Rawlinson, Fan Shi, Izhak Haviv, Linda Stern, Adam Kowalczyk, Michael Inouye
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41431-019-0402-9

Immunity and mental illness: findings from a Danish population-based immunogenetic study of seven psychiatric and neurodevelopmental disorders
Cited by: 32
Author(s): Ron Nudel, Michael E. Benros, Morten Dybdahl Krebs, Rosa Lundbye Allesøe, Camilla K. Lemvigh, Jonas Bybjerg‐Grauholm, Anders D. Børglum, Mark J. Daly, Merete Nordentoft, Ole Mors, David M. Hougaard, Preben Bo Mortensen, Alfonso Buil, Thomas Werge, Simon Rasmussen, Wesley K. Thompson
Software Mentions: 1
Published: over 5 years ago

10.3389/fgene.2021.675860

Association Between Human Leukocyte Antigen Class I and II Diversity and Non-virus-associated Solid Tumors
Cited by: 2
Author(s): Zhiwei Liu, Allan Hildesheim
Software Mentions: 1
Published: over 3 years ago

10.3389/fgene.2018.00503

Next-Generation Sequencing Based HLA Typing: Deciphering Immunogenetic Aspects of Sarcoidosis
Cited by: 39
Author(s): Amit Kishore, Martin Petřek
Software Mentions: 1
Published: about 6 years ago

10.1007/s00296-020-04523-6

Pharmacogenetic investigation of efficacy response to mepolizumab in eosinophilic granulomatosis with polyangiitis
Cited by: 2
Author(s): Lynn D. Condreay, Laura R. Parham, Xiumei Qu, Jonathan Steinfeld, Michael E. Wechsler, Benjamin A. Raby, Steven W. Yancey, Soumitra Ghosh
Software Mentions: 1
Published: almost 5 years ago

10.1038/tp.2016.155

Genome-wide association study of antisocial personality disorder
Cited by: 80
Author(s): M-R Rautiainen, Tiina Paunio, Eila Repo-Tiihonen, Matti Virkkunen, Hanna Ollila, Sonja Sulkava, Otto Jolanki, Aarno Palotie, Jari Tiihonen
Software Mentions: 1
Published: over 8 years ago

10.1128/mSphere.00232-20

Genetic Association Reveals Protection against Recurrence of <i>Clostridium difficile</i> Infection with Bezlotoxumab Treatment
Cited by: 11
Author(s): Judong Shen, Devan V. Mehrotra, Mary Beth Dorr, Zhen Zeng, Junhua Li, Xun Xu, David C. Nickle, Emily R. Holzinger, Aparna Chhibber, Mark H. Wilcox, Rebecca Blanchard, Peter M. Shaw
Software Mentions: 1
Published: over 4 years ago

10.1016/j.ajhg.2015.09.005

Imputation of KIR Types from SNP Variation Data
Cited by: 63
Author(s): Damjan Vukcevic, James A. Traherne, Sigrid Næss, Eva Ellinghaus, Yoichiro Kamatani, Alexander Dilthey, Mark Lathrop, Tom H. Karlsen, André Franke, Miriam F. Moffatt, William Cookson, John Trowsdale, Gil McVean, Stephen Sawcer, Stephen Leslie
Software Mentions: 1
Published: about 9 years ago

10.1155/2014/971818

The Relevance of<i>HLA</i>Sequencing in Population Genetics Studies
Cited by: 42
Author(s): Alicia Sanchez‐Mazas, Diogo Meyer
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12863-016-0377-2

Genome-wide imputation study identifies novel HLA locus for pulmonary fibrosis and potential role for auto-immunity in fibrotic idiopathic interstitial pneumonia
Cited by: 76
Author(s): Tasha E. Fingerlin, Weimin Zhang, Ivana V. Yang, Hannah C. Ainsworth, Pamela Russell, Rachel Z. Blumhagen, Marvin I. Schwarz, Kevin K. Brown, Mark P. Steele, James E. Loyd, Gregory P. Cosgrove, David A. Lynch, Steve D. Groshong, Harold R. Collard, Paul J. Wolters, Williamson Z. Bradford, Karl Kossen, Scott D. Seiwert, Roland M. du Bois, Christine Kim Garcia, Megan S. Devine, Gunnar Guðmundsson, Helgi J. Ísaksson, Naftali Kaminski, Yingze Zhang, Kevin F. Gibson, Lisa Lancaster, Toby M. Maher, Philip L. Molyneaux, Athol U. Wells, Miriam F. Moffatt, Moisés Selman, Annie Pardo, Dong Soon Kim, James D. Crapo, Barry J. Make, Elizabeth A. Regan, Dinesha Walek, Jerry Daniel, Yoichiro Kamatani, Diana Zélénika, Elissa Murphy, Keith P Smith, David F. McKean, Brent S. Pedersen, Janet Talbert, Julia Powers, Cheryl Markin, Kenneth B. Beckman, Mark Lathrop, Brian M. Freed, Carl D. Langefeld, David A. Schwartz
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2156-15-72

Performance of HLA allele prediction methods in African Americans for class II genes HLA-DRB1, −DQB1, and –DPB1
Cited by: 23
Author(s): Albert M. Levin, Indra Adrianto, Indrani Datta, Michael C. Iannuzzi, Sheri Trudeau, Paul McKeigue, Courtney G. Montgomery, Benjamin A. Rybicki
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12916-019-1392-8

Persistent C-peptide secretion in Type 1 diabetes and its relationship to the genetic architecture of diabetes
Cited by: 40
Author(s): Paul McKeigue, Athina Spiliopoulou, Stuart J. McGurnaghan, Marco Colombo, Luke Blackbourn, Colin N.A. Palmer, Suna Onengut-Gomuscu, Stephen S. Rich, Colin N.A. Palmer, John McKnight, Mark W. J. Strachan, A. W. Patrick, John Chalmers, Robert Lindsay, John R. Petrie, Thekkepat C. Sandeep, Andrew Collier, Sandra MacRury, Helen M. Colhoun
Software Mentions: 1
Published: over 5 years ago

10.3390/biology9120467

HLA-DRB1*07:01 and *08:02 Alleles Confer a Protective Effect Against ACPA-Positive Rheumatoid Arthritis in a Latin American Admixed Population
Cited by: 4
Author(s): Patricia Castro‐Santos, Jordi Olloquequi, Ricardo A. Verdugo, Miguel Gutiérrez, Carmen Pinochet, Luis A. Quiñones
Software Mentions: 1
Published: about 4 years ago

Ecosyste.ms: Papers

Projects: bioconductor: HIBAG

Papers Mentioning HIBAG 22