bioconductor: GENESIS | Projects | Ecosyste.ms: Papers

10.1186/1471-2164-12-461

Differential gene expression profiling of human bone marrow-derived mesenchymal stem cells during adipogenic development
Cited by: 91
Author(s): Adriane Menßen, Thomas Häupl, Michael Sittinger, Bruno Delorme, Pierre Charbord, Jochen Ringe
Software Mentions: 1
Published: almost 14 years ago

10.1038/srep14659

Demonstration of self-truncated ionization injection for GeV electron beams
Cited by: 91
Author(s): Mohammad Mirzaie, S. Li, Ming Zeng, N. Hafz, M. Chen, G. Y. Li, Qinghua Zhu, H. Liao, Thomas Sokollik, F. Liu, Y. Y., L.M. Chen, Zheng-Ming Sheng, J. Zhang
Software Mentions: 1
Published: about 9 years ago

10.1038/srep28427

Global climate change driven by soot at the K-Pg boundary as the cause of the mass extinction
Cited by: 62
Author(s): Kunio Kaiho, Naga Oshima, Kouji Adachi, Yoshiyuki Adachi, Takuya Mizukami, Megumu Fujibayashi, Ryosuke Saito
Software Mentions: 1
Published: over 8 years ago

10.1107/S1600577521003465

The FEL in the SXL project at MAX IV
Cited by: 4
Author(s): Weilun Qin, Francesca Curbis, Joel Andersson, Vitaliy Goryashko, L. Isaksson, Billy Kyle, Filip Lindau, Erik Mansten, Mihai Pop, Peter Salén, Hamed Tarawneh, Pedro Fernandes Tavares, Sara Thorin, A.S. Vorozhtsov, Sverker Werin
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-017-04962-5

A Storage Ring Based Free-Electron Laser for Generating Ultrashort Coherent EUV and X-ray Radiation
Cited by: 35
Author(s): Chao Feng, Zhentang Zhao
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-9-387

Multiple actions of lysophosphatidic acid on fibroblasts revealed by transcriptional profiling
Cited by: 56
Author(s): Catelijne Stortelers, Ron Kerkhoven, Wouter H. Moolenaar
Software Mentions: 1
Published: over 16 years ago

10.1038/s41598-018-25778-x

Isolated terawatt attosecond hard X-ray pulse generated from single current spike
Cited by: 13
Author(s): Chi Hyun Shim, Yong Woon Parc, Sandeep Kumar, In Soo Ko, Dong Eon Kim
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-43061-5

Slippage boosted spectral cleaning in a seeded free-electron laser
Cited by: 0
Author(s): Chao Feng, Xingtao Wang, Ting Lan, Meng Zhang, Xuan Li, Junqiang Zhang, Wenyan Zhang, Liqiang Feng, Xiaoqing Liu, Haixiao Deng, Bo Liu, Dong Wang, Zhentang Zhao
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-57905-y

Effect of high slice energy spread of an electron beam on the generation of isolated, terawatt, attosecond X-ray free-electron laser pulse
Cited by: 4
Author(s): Chi Hyun Shim, Yong Woon Parc, Dong Eon Kim
Software Mentions: 1
Published: almost 5 years ago

10.1107/S1600577517016186

Focusing X-ray free-electron laser pulses using Kirkpatrick–Baez mirrors at the NCI hutch of the PAL-XFEL
Cited by: 40
Author(s): Jangwoo Kim, Hyo Yun Kim, Jaehyun Park, Sang Soo Kim, Sunam Kim, Seungyu Rah, Jun Lim, Kichun Nam
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-020-60328-4

Attosecond Coherence Time Characterization in Hard X-Ray Free-Electron Laser
Cited by: 2
Author(s): Guan-Qun Zhou, F.‐J. Decker, Yuantao Ding, Yi Jiao, Alberto Lutman, Timothy Maxwell, T.O. Raubenheimer, Jiuqing Wang, Aaron J. Holman, Cheng-Ying Tsai, Jerome Y. Wu, Weiwei Wu, Chuan Yang, M. Yoon, Juhao Wu
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-67027-0

Generation of intense and coherent sub-femtosecond X-ray pulses in electron storage rings
Cited by: 5
Author(s): Ji-Gwang Hwang, G. Schiwietz, M. Abo-Bakr, T. Atkinson, Markus Ries, P. Goslawski, G. Klemz, Roland Müller, Andreas Schälicke, Andreas Jankowiak
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-86806-x

Topological clustering of regulatory genes confers pathogenic tolerance to cassava brown streak virus (CBSV) in cassava
Cited by: 2
Author(s): Thanakorn Jaemthaworn, Saowalak Kalapanulak, Treenut Saithong
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-92911-8

Mendelian randomization analysis of arsenic metabolism and pulmonary function within the Hispanic Community Health Study/Study of Latinos
Cited by: 2
Author(s): Molly Scannell Bryan, Tamar Sofer, Majid Afshar, Yasmin Mossavar‐Rahmani, H. Dean Hosgood, Naresh M. Punjabi, Donglin Zeng, Martha L. Daviglus, Maria Argos
Software Mentions: 1
Published: over 3 years ago

10.1107/S1600577515012850

<i>SIMPLEX</i>: simulator and postprocessor for free-electron laser experiments
Cited by: 27
Author(s): Takashi Tanaka
Software Mentions: 1
Published: over 9 years ago

10.3390/s90604286

An Overview of the Use of the SimSphere Soil Vegetation Atmosphere Transfer (SVAT) Model for the Study of Land-Atmosphere Interactions
Cited by: 33
Author(s): George P. Petropoulos, Toby N. Carlson, Martin J. Wooster
Software Mentions: 1
Published: over 15 years ago

10.1002/advs.201901478

Magnetic Liquid Metal (Fe‐EGaIn) Based Multifunctional Electronics for Remote Self‐Healing Materials, Degradable Electronics, and Thermal Transfer Printing
Cited by: 137
Author(s): Rui Guo, Xuyang Sun, Bo Yuan, Hongzhang Wang, Jing Liu
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0010040

Regulatory Adaptation of Staphylococcus aureus during Nasal Colonization of Humans
Cited by: 105
Author(s): Marc Burian, Christiane Wolz, Christiane Goerke
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0025024

Coral Uptake of Inorganic Phosphorus and Nitrogen Negatively Affected by Simultaneous Changes in Temperature and pH
Cited by: 71
Author(s): Claire Godinot, Fanny Houlbrèque, Renaud Grover, Christine Ferrier‐Pagès
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0079267

Correlated Conductance Parameters in Leech Heart Motor Neurons Contribute to Motor Pattern Formation
Cited by: 29
Author(s): Damon G. Lamb, Ronald L. Calabrese
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0017012

Frequent and Simultaneous Epigenetic Inactivation of TP53 Pathway Genes in Acute Lymphoblastic Leukemia
Cited by: 56
Author(s): Amaia Vilas–Zornoza, Xabier Agirre, Vanesa Martín-Palanco, José Ignacio Martin-Subero, Edurne San José‐Eneriz, Leire Gárate, Sara Álvarez, Estíbaliz Miranda, Paula Rodríguez‐Otero, J. Rifón, António Torres, Marı́a José Calasanz, Juan C. Cigudosa, José Román‐Gómez, Felipe Prósper
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0002217

Effects of Active Conductance Distribution over Dendrites on the Synaptic Integration in an Identified Nonspiking Interneuron
Cited by: 1
Author(s): Akira Takashima, Masahiro Takahata
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0007594

Identification of miRNAs in a Liver of a Human Fetus by a Modified Method
Cited by: 15
Author(s): Dong Liu, Jing Fan, Manxue Mei, Sigurður Ingvarsson, Huiping Chen
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0154039

Global Dynamic Transcriptome Programming of Rapeseed (Brassica napus L.) Anther at Different Development Stages
Cited by: 14
Author(s): Zhanjie Li, Peipei Zhang, Jinyin Lv, Yufeng Cheng, Jianmin Cui, Huixian Zhao, Shengwu Hu
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0183024

Can facts trump unconditional trust? Evidence-based information halves the influence of physicians’ non-evidence-based cancer screening recommendations
Cited by: 19
Author(s): Odette Wegwarth, Gert G. Wagner, Gerd Gigerenzer
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0095154

Transcription Control Pathways Decode Patterned Synaptic Inputs into Diverse mRNA Expression Profiles
Cited by: 6
Author(s): Pragati Jain, Upinder S. Bhalla
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0096916

Manganese Superoxide Dismutase (SOD2) Polymorphisms, Plasma Advanced Oxidation Protein Products (AOPP) Concentration and Risk of Kidney Complications in Subjects with Type 1 Diabetes
Cited by: 29
Author(s): Kamel Mohammedi, Naïma Bellili-Muñoz, Fathi Driss, Ronan Roussel, Nathalie Seta, Frédéric Fumeron, Samy Hadjadj, Michel Marre, Gilberto Velho
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0055607

Theta Frequency Background Tunes Transmission but Not Summation of Spiking Responses
Cited by: 0
Author(s): Dhanya Parameshwaran, Upinder S. Bhalla
Software Mentions: 1
Published: almost 12 years ago

10.1186/s13063-020-4143-4

CAPAbility: comparison of the JOURNEY II Bi-Cruciate Stabilised and GENESIS II total knee arthroplasty in performance and functional ability: protocol of a randomised controlled trial
Cited by: 3
Author(s): Celia Clarke, Valerie Pomeroy, Allan Clark, Graham Creelman, Nicola Hancock, Simon Horton, Anne Killett, Charles Mann, Estelle Payerne, Andoni P. Toms, Gareth Roberts, Toby Smith, Ann Marie Swart, Iain McNamara
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0002997

The Silkworm (Bombyx mori) microRNAs and Their Expressions in Multiple Developmental Stages
Cited by: 113
Author(s): Xiaomin Yu, Qing Zhou, Sung‐Chou Li, Qibin Luo, Yuanqing Cai, Wen-chang Lin, Huan Chen, Yue Yang, Songnian Hu, Jun Yu
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0212932

Integrated assessment of short-term direct and indirect economic flood impacts including uncertainty quantification
Cited by: 26
Author(s): Tobias Sieg, Thomas Schinko, Kristin Vogel, Reinhard Mechler, Bruno Merz, Heidi Kreibich
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pgen.1004227

Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans
Cited by: 188
Author(s): Jessica L. Soyer, Mennat El Ghalid, Nicolas Glaser, Bénédicte Ollivier, Juliette Linglin, Jonathan Grandaubert, Marie‐Hélène Balesdent, Lanelle Connolly, Michael Freitag, Thierry Rouxel, Isabelle Fudal
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0136192

Targeted Sequencing of the Mitochondrial Genome of Women at High Risk of Breast Cancer without Detectable Mutations in BRCA1/2
Cited by: 12
Author(s): Sophie Blein, Laure Barjhoux, Genesis investigators, Francesca Damiola, Marie-Gabrielle Dondon, Séverine Eon-Marchais, Morgane Marcou, Olivier Caron, Alain Lortholary, Benedetto Bruno, Philippe Vennin, Pascaline Berthet, Catherine Noguès, Christine Lasset, Marion Gauthier‐Villars, Sylvie Mazoyer, Dominique Stoppa‐Lyonnet, Nadine Andrieu, Gilles Thomas, Olga M. Sinilnikova, David G. Cox
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pgen.1003633

Sociogenomics of Cooperation and Conflict during Colony Founding in the Fire Ant Solenopsis invicta
Cited by: 33
Author(s): Fabio Manfredini, Oksana Riba‐Grognuz, Yannick Wurm, Laurent Keller, DeWayne Shoemaker, Christina M. Grozinger
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pcbi.1000004

Stochastic Differential Equation Model for Cerebellar Granule Cell Excitability
Cited by: 64
Author(s): A. Saarinen, Marja-Leena Linne, Olli Yli‐Harja
Software Mentions: 1
Published: over 16 years ago

10.1155/2012/595398

The Effect of Neural Noise on Spike Time Precision in a Detailed CA3 Neuron Model
Cited by: 4
Author(s): Eduard Kuriščák, Petr Maršálek, Július Štroffek, Z Wünsch
Software Mentions: 1
Published: almost 13 years ago

10.1093/database/baz161

Prot2HG: a database of protein domains mapped to the human genome
Cited by: 17
Author(s): David Staněk, Dana M. Bis-Brewer, Cima Saghira, Matt C. Danzi, Pavel Seeman, Petra Laššuthová, Stephan Züchner
Software Mentions: 1
Published: almost 5 years ago

10.1186/s13046-020-01785-7

Loss of miR-192-5p initiates a hyperglycolysis and stemness positive feedback in hepatocellular carcinoma
Cited by: 15
Author(s): Yuanzhuo Gu, Feiyang Ji, Niya Liu, Yongzhi Zhao, Xiyang Wei, Shiyuan Hu, Jia Wang, Xin Wei Wang, Anuradha Budhu, Juling Ji, Bin Zhao, Stephanie Roessler, Xin Zheng, Junfang Ji
Software Mentions: 1
Published: almost 4 years ago

10.1111/dom.13455

Regulation of hepatic glucose production and AMPK by AICAR but not by metformin depends on drug uptake through the equilibrative nucleoside transporter 1 (ENT1)
Cited by: 9
Author(s): Lisa Logie, Zoe Lees, J. William Allwood, Gordon J. McDougall, Craig Beall, Graham Rena
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1000670

A Kinetic Model of Dopamine- and Calcium-Dependent Striatal Synaptic Plasticity
Cited by: 85
Author(s): T. Nakano, Tomokazu Doi, Junichiro Yoshimoto, Kenji Doya
Software Mentions: 1
Published: almost 15 years ago

10.1002/ece3.5854

Morphological and molecular characterization of freshwater prawn of genus <i>Macrobrachium</i> in the coastal area of Cameroon
Cited by: 7
Author(s): Judith G. Makombu, Francesca Stomeo, PM Oben, Tilly Eldridge, Opiyo O. Stephen, BO Oben, Evans K. Cheruiyot, Getinet Mekuriaw Tarekegn, Paul Zango, Atem E. Egbe, Abigail Ndagyong, Eric Mialhe, Jules Romain Ngueguim, Fidalis D. N. Mujibi
Software Mentions: 1
Published: almost 5 years ago

10.1007/s10198-020-01160-5

Does the use of health technology assessment have an impact on the utilisation of health care resources? Evidence from two European countries
Cited by: 3
Author(s): Belén Corbacho Martín, Michael Drummond, Rita Santos, Elizabeth Jones, Josep María Borràs, J. Mestre-Ferrandiz, Jaime Espín, Nathaniel J. Henry, A Prat
Software Mentions: 1
Published: almost 5 years ago

Projects: bioconductor: GENESIS

Papers Mentioning GENESIS 243